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ProteomicsProteome of familial protein S deficiency
The plasma samples from four patients with inherited protein S deficiency (PSD, n=4) and three controls with non-protein S deficiency (NPSD, n=3) were collected and subsequently performed on analyses of proteomics.
ORGANISM(S): Homo sapiens (Human) 
2024-10-17 | PXD055111 | Pride
Proteomics Protein s Plasma Coagulation 
TranscriptomicsSteady-state hydrogen peroxide induces glycolysis via metabolic reroute in P. aeruginosa and S. aureus
GAPDHs from human pathogens S. aureus and P. aeruginosa can be readily inhibited by ROS-mediated direct oxidation of their catalytic active cysteines. Because of the rapid degradation of H2O2 by bacterial catalase, only steady-state but not one-dose treatment of H2O2 induces rapid metabolic reroute ...
ORGANISM(S): Pseudomonas aeruginosa MPAO1/P1 
2014-05-08 | E-GEOD-55528 | biostudies-arrayexpress
TranscriptomicsINO80-regulated genes in S-phase after MMS treatment
This is transcription analysis of genes regulated by the INO80 chromatin remodeling complex in S-phase of the cell cycle after MMS treatment. Wildtype and ino80 mutant cells were first synchronized at G1 using alpha-factor, the cells were released in to S-phase in the presence of 0.02% MMS. After 45...
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-20 | E-GEOD-18555 | biostudies-arrayexpress
ProteomicsA rapid and convenient sample treatment method based on the dissolvable polyacrylamide gel for S-acylation proteomics
S-acylation, dissolvable gel, sample treatment, proteomics
ORGANISM(S): Mus Musculus 
2024-06-04 | PXD052808 |
ProteomicsN-linked glycosylation of recombinant soluble ectodomain of HKU1 haemagglutinin esterase
Coronaviruses (CoVs) encompass many human pathogens such as HKU-1, OC43, NL63, SARS, MERS and, most recently, nCoV-2019. The spike (S) protein of CoVs has received much attention for its role in host tropism and immunity, but it is becoming increasingly clear that the haemagglutinin esterase (HE) al...
ORGANISM(S): Human coronavirus HKU1 
2020-07-24 | PXD017545 | Pride
Ethcd Structure Glycosylation Coronavirus 
TranscriptomicsTranscription profiling of S. cerevisiae to identify Upf1p-associated transcripts in S. cerevisiae
The goal of this experiment was to identify transcripts associated with the S. cerevisiae Upf1 protein. Experiment Overall Design: The RNA population from four independent pairs of Upf1p-TAP and mock affinity selections were analyzed by using Affymetrix Yeast Genome S98 Arrays.
ORGANISM(S): Saccharomyces cerevisiae 
2008-06-16 | E-GEOD-9486 | biostudies-arrayexpress
TranscriptomicsNucleosome Mapping in S. pombe Centromeres
A key element for defining the centromere identity is the incorporation of a specific histone H3, CENP-A, known as Cnp1p in S. pombe. Previous studies have suggested that functional S. pombe centromeres lack nucleosome arrays and may involve chromatin remodeling as a key step of kinetochore assembl...
ORGANISM(S): Schizosaccharomyces pombe 
2008-05-30 | E-GEOD-10742 | biostudies-arrayexpress
TranscriptomicspH stress in Desulfovibrio vulgaris Hildenborough
Using data from microarray experiments, we investigated the effects of excess NaCl on D. vulgaris. Keywords: stress response, time course Comparison of cells treated with pH10 pH to untreated cells at times of 0,120,240,30,60 min.
ORGANISM(S): Desulfovibrio vulgaris str. Hildenborough 
2007-08-31 | E-GEOD-8197 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse hippocampus after maternal treatment with saline or 20 mg/kg cocaine twice daily on gestational days 8-19
We explored the hypothesis that maternal cocaine exposure could alter the fetal epigenetic machinery sufficiently to cause lasting neurochemical and functional changes in the offspring. These data were used as preliminary results for paper:; Maternal cocaine administration in mice alters DNA methy...
ORGANISM(S): Mus musculus 
2008-06-15 | E-GEOD-6651 | biostudies-arrayexpress
TranscriptomicsTanscriptional profiling of heavy metal hyperaccumulator Sedum alfredii Hance (Crassulaceae) through RNA sequencing (RNA-seq) reveals molecular mechanisms of cadmium tolerance in plants
RNA-seq was used to unveil the molelcualr mechanisms of Cd tolereance in Sedum alfredii Hance shoots
ORGANISM(S): Sedum alfredii 
2013-11-15 | E-MTAB-1011 | biostudies-arrayexpress
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