Herold A A - OmicsDI

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Unknown (1081)
Transcriptomics (41)
Proteomics (41)
Genomics (40)
Metabolomics (4)

Organisms

Homo sapiens (82)
Mus musculus (13)
Sulfobacillus thermosulfidooxidans (9)
Acidithiobacillus caldus (8)
Leptospirillum ferriphilum (7)
Drosophila melanogaster (5)
Arabidopsis thaliana (2)
Severe acute respiratory syndrome coronavirus 2 (2)
Trichoderma reesei (1)
Chlorocebus sabaeus (1)
Escherichia coli (1)
Influenza A virus (A/Panama/2007/1999(H3N2)) (1)
Middle East respiratory syndrome-related coronavirus (1)
wastewater metagenome (1)

Organisms

Homo sapiens (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (46)
pride (40)
EGA (33)
MetaboLights (4)
ENA (3)
PanoramaPublic (1)

Tissue

Cell culture (5)
Permanent cell line cell (3)
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Blood (1)
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Disease

Acute leukemia (4)
Brain cancer (4)
Brain glioblastoma multiforme (2)
COVID-19 (2)
Colon cancer (1)
Influenza (1)
Meningitis (1)
Multiple sclerosis (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Technology Type

Mass Spectrometry (40)
Shotgun proteomics (29)
Gel-based experiment (5)
Mass spectrometry (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Bottom-up proteomics (3)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

NextSeq 500 (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina MiSeq (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse (1)

Publication Date

2020 (21)
2021 (9)
2014 (9)
2022 (9)
2016 (7)
2023 (6)
2015 (4)
2012 (3)
2011 (3)
2026 (3)
2013 (2)
2010 (2)
2007 (2)
2005 (2)
2025 (2)
2018 (2)
2019 (1)
2008 (1)
2003 (1)
2024 (1)

CHEBI ID

CHEBI:15318 (2)
CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:15843 (2)
CHEBI:15978 (2)
CHEBI:16010 (2)
CHEBI:16113 (2)
CHEBI:16335 (2)
CHEBI:16449 (2)
CHEBI:16668 (2)
CHEBI:16811 (2)
CHEBI:16865 (2)
CHEBI:17148 (2)
CHEBI:17368 (2)
CHEBI:17562 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17821 (2)
CHEBI:18186 (2)
CHEBI:18237 (2)
CHEBI:26271 (2)
CHEBI:28044 (2)
CHEBI:28842 (2)
CHEBI:30653 (2)
CHEBI:33508 (2)
CHEBI:131608 (1)
CHEBI:132223 (1)
CHEBI:133793 (1)
CHEBI:133979 (1)

Metabolite Name

Inosine (2)
Methionine (2)
Phenylalanine (2)
Proline (2)
Tyrosine (2)
1,3-Diaminopropane (1)
1-Monooleoylglycerol (1)
1-Monopalmitoylglycerol (1)
1-Pyrroline-3-hydroxy-5-carboxylic acid (1)
11-Dehydro-TXB2 (1)
11-epi-PGF2a (1)
12S-HOME (1)
12S-HPETE; 12-Hydroperoxyicosatetraenoate (1)
13R-HOME (1)
15-HETE (1)
15-Keto-PGF2a (1)
15-methyl-15S-PGD2 (1)
2-Glyceryl-PGD2 (1)
2-Hydroxypyridine (1)
2-Monooleoylglycerol (1)
2-Oxobutanoic acid (1)
20-HETE; 20-Hydroxyeicosatetraenoate (1)
3-(4-Hydroxyphenyl)Lactate (1)
3-Hydroxy-3-Methylglutarate (1)
3-Hydroxybutyric acid (1)
3-Hydroxyphenylacetate (1)
3-O-methyldopa (1)
3-Oxohexadecanoate (1)
4-Aminobutanoic acid (1)
4-Hydroxy palmitate (1)

First Public Date

2025 (1)
2024 (1)
2021 (1)

Study type

Transcription profiling by array (20)
RNA-seq of coding RNA (6)
Methylation profiling by array (5)
ChIP-seq (3)
RNAi profiling by array (2)
Comparative genomic hybridization by array (2)
Unknown experiment type (1)
Human - Two-color microarray (1)
Human - Methylation microarray (1)
ChIP-chip by tiling array (1)
Cell line - High-throughput sequencing (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2023 (130)
2022 (124)
2018 (99)
2025 (97)
2024 (94)
2021 (89)
2020 (82)
2019 (74)
2016 (66)
2015 (50)
2017 (46)
2014 (35)
2013 (32)
2012 (20)
2026 (20)
2011 (19)
2009 (12)
2010 (10)
2008 (7)
2007 (5)
2005 (5)
2003 (3)
2006 (3)
2004 (1)
2000 (1)

Lab affiliation

Ruhr University Bochum, Germany (10)
Ruhr-University Bochum, Germany (2)
Ruhr-Universität Bochum LS Biochemie der Pflanzen Universitätsstraße 150 44780 Bochum (2)
The University of Melbourne (2)
Brain tumor translational targets German Cancer Research Center (DKFZ) Im Neuenheimer Feld 580 69120 Heidelberg Germany (1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zürich, Otto Stern Weg 3, 8093, Zürich, Switzerland (1)
Dr. Gerhard Mittler Proteomics Research Facility/Unit Max Planck Institute of Immunobiology and Epigenetics Stuebeweg 51, D-79108 Freiburg, Germany (1)
Eco-Systems Biology group, Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Luxembourg (1)
Functional Proteome Analysis, German Cancer Research Center(DKFZ) (1)
German Cancer Research Center, Heidelberg (1)
Head of Core Facility Mass Spectrometry, Faculty of Chemistry, Philipps-University Marburg (1)
Heidelberg University Hospital (1)
Heidelberg University Hospital, Department of Neurology (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany Frankfurt Cancer Institute, Frankfurt am Main, Germany Cardio-Pulmonary Institute, Frankfurt am Main, Germany (1)
Institute of Plant and Microbial Biology, Zürich-Basel Plant Science Center, University of Zürich, Zürich, Switzerland (1)
Junior Research Group “Brain Tumor Translational Targets”, German Cancer Research Center (DKFZ), Heidelberg, Germany (1)
Klinik für Kinder- und Jugendmedizin, Medizinische Fakultät Mannheim, Germany (1)
Laboratory Head Vince Laboratory The Walter and Eliza Hall Institute Victoria, Australia 3052 (1)
Laboratory head, Cell Death and Cell Signalling Division, WEHI, Australia (1)
Marcel Doerflinger, PhD Division of Infectious Diseases and Immune Defence The Walter and Eliza Hall Institute of Medical Research 1G Royal Parade, 3052 Parkville VIC, Australia (1)
Max Planck Institute for Biomedical Research Bioanalytical Mass Spectrometry Unit Röntgenstr. 20 48149 Münster Germany (1)
MaxPlanck Institute of Biochemistry (1)
Prof. Dr. Andreas Schlosser Rudolf-Virchow-Zentrum für Experimentelle Biomedizin Universität Würzburg Josef-Schneider-Str. 2 97080 Würzburg Germany (1)
Proteome Dynamics, Max Delbruck Center for Molecular Medicine, Germany (1)
Proteomics and Cancer Cell Signaling Unit, German Cancer Research Center, Heidelberg,Germany (1)
The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Melbourne, Victoria 3052, Australia (1)
University of Halle-Wittenberg Institute for Biology – General Genetics Weinbergweg 10 06120 Halle (Saale) Germany (1)
Yale University Department of Molecular Biophysics and Biochemistry (1)

Tags

xref:PubMed:40234567 (1)
xref:PubMed:40841511 (1)

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Low number of intrafollicular T cells may predict favourable response to rituximab-based immuno-chemotherapy in advanced follicular lymphoma: a secondary analysis of a randomized clinical trial.

Not available

S-EPMC6658576 | biostudies-literature

Quantification of myocardial perfusion by cardiovascular magnetic resonance.

Not available

S-EPMC2964700 | biostudies-literature

Characterisation of mice lacking the inflammatory caspases-1/11/12 reveals no contribution of caspase-12 to cell death and sepsis.

Not available

S-EPMC6748106 | biostudies-literature

Identification of a 24-gene prognostic signature that improves the European LeukemiaNet risk classification of acute myeloid leukemia: an international collaborative study.

Not available

S-EPMC3595425 | biostudies-literature

Characterization of a novel human BFL-1-specific monoclonal antibody.

Not available

S-EPMC7206078 | biostudies-literature

LOC283731 promoter hypermethylation prognosticates survival after radiochemotherapy in IDH1 wild-type glioblastoma patients

MGMT promoter methylation status is currently the only established molecular prognosticator in IDH wild-type glioblastoma multiforme (GBM). Therefore, we aimed to discover novel therapy-associated epigenetic biomarkers. After enrichment for hypermethylated fractions using methyl-CpG-immunoprecipitat...

ORGANISM(S): Homo sapiens

2016-03-10 | E-GEOD-74561 | biostudies-arrayexpress

Translational Breast Cancer Research Consortium (TBCRC) 022: A Phase II Trial of Neratinib for Patients With Human Epidermal Growth Factor Receptor 2-Positive Breast Cancer and Brain Metastases.

Not available

S-EPMC5070554 | biostudies-literature

Deletion of the transcriptional regulator TFAP4 accelerates c-MYC-driven lymphomagenesis.

Not available

S-EPMC10244435 | biostudies-literature

RNAi knock down of export factors in Drosphila Schneider cell lines

Six different endogenous Drosophila proteins (all potential export factors) have been inactivated using RNAi and leptomycin B (LMB) treatments. Five different endogenous Drosophila proteins (all potential export factors) have been targeted by RNAi. The effect on mRNA export is analyzed by monitoring...

ORGANISM(S): Drosophila melanogaster

2003-05-15 | E-MEXP-4 | biostudies-arrayexpress

Combined absence of TRP53 target genes ZMAT3, PUMA and p21 cause a high incidence of cancer in mice.

Not available

S-EPMC10850490 | biostudies-literature

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