Hfba - OmicsDI

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Proteomics (36)
Unknown (9)
Metabolomics (3)
Genomics (1)

Organisms

Schizophyllum commune H4-8 (33)
Mycobacterium tuberculosis SP7 (33)
Oryza sativa Japonica Group (33)
Candidatus Endoriftia persephonae (33)
Mycobacterium tuberculosis SP10 (33)
Mycobacterium tuberculosis SP13 (33)
Mycobacterium tuberculosis SP22 (33)
Enterobacter ludwigii (33)
Chlamydomonas reinhardtii (33)
Lama (33)
Pyricularia oryzae P131 (33)
Enterococcus mundtii CRL35 (33)
Oncorhynchus tshawytscha (33)
Pseudomonas canadensis (33)
Strongylocentrotus purpuratus (33)
Influenza A virus (A/California/04/2009(H1N1)) (33)
Homo (33)
Pseudomonas aeruginosa PAO1H2O (33)
Human alphaherpesvirus 1 strain 17 (33)
Quercus petraea (33)
Canis lupus (33)
Mycobacterium tuberculosis SP1 (33)
Marchantia polymorpha subsp. ruderalis (33)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (33)
Curtobacterium pusillum (33)
Methylocystis sp. (33)
Exiguobacterium sp. SH31 (33)
Palaemonetes sp. common grass shrimp associated circular virus (33)
Amaranthus tricolor (33)
Spirochaeta sp. ELBA (33)

Repository

pride (33)
MassIVE (3)
MetaboLights (3)
ENA (1)

Tissue

Embryonic stem cell (5)
Brain (4)
Embryo (3)
Cell culture (3)
Blood plasma (2)
HeLa cell (2)
Liver (2)
Blood (2)
Limb bud (1)
Forebrain (1)
Culture condition:anaerobically-grown cell (1)
Cumulus cell (1)
Ovarian cumulus cell (1)
Neuron apoptotic process (1)
Lung cell line (1)
Primary neuron (1)
Oocyte (1)
Blood serum (1)
Prokaryotic cell (1)
Hepatocyte (1)
Lung (1)
Permanent cell line cell (1)
Epithelial cell (1)
Kidney (1)
Blood cell (1)

Disease

Disease free (6)
Crohn's colitis (1)
Pulmonary hypertension (1)
Renal clear cell carcinoma (1)
Cervix carcinoma (1)
Alzheimer's disease (1)

Technology Type

Mass Spectrometry (33)
Bottom-up proteomics (15)
Shotgun proteomics (15)
Data-dependent acquisition (6)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry (2)
SRM/MRM (2)
Gel-based experiment (2)
Mass spectrometry assay (1)

Instrument Platform

MaXis II (2)
TripleTOF 5600 (1)
Liquid Chromatography MS - positive - direct infusion (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2022 (7)
2026 (7)
2024 (5)
2021 (4)
2025 (4)
2016 (3)
2019 (3)
2023 (2)
2020 (2)
2018 (1)
2015 (1)

CHEBI ID

CHEBI:77347 (1)
CHEBI:77345 (1)
CHEBI:77344 (1)
CHEBI:140361 (1)
CHEBI:140362 (1)
CHEBI:180469 (1)
CHEBI:136245 (1)
CHEBI:180468 (1)
CHEBI:136239 (1)
CHEBI:136236 (1)
CHEBI:44409 (1)
CHEBI:18304 (1)
CHEBI:27748 (1)
CHEBI:15927 (1)
CHEBI:16171 (1)
CHEBI:64399 (1)
CHEBI:16675 (1)
CHEBI:15763 (1)
CHEBI:15940 (1)
CHEBI:28683 (1)
CHEBI:17230 (1)
CHEBI:15346 (1)
CHEBI:16797 (1)
CHEBI:15422 (1)
CHEBI:16761 (1)
CHEBI:16335 (1)
CHEBI:16027 (1)
CHEBI:27897 (1)
CHEBI:16680 (1)
CHEBI:15414 (1)

Metabolite Name

PIP(36:2) (1)
PIP(36:1) (1)
PIP(38:4) (1)
PI 38:2 (1)
PI 38:1 (1)
-aminocaproate (1)
N-(2-{[1-(cyclopentylcarbamoyl)cyclohexyl](1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)amino}-2-oxoethyl)benzamide (1)
N-[2-(3,4-Dimethoxyphenyl)ethyl]-2-imino-1-[3-(4-morpholinyl)propyl]-5-oxo-1,5-dihydro-2H-dipyrido[1,2-a:2 ,3 -d]pyrimidine-3-carboxamide (1)
1,4-Bis[(triphenylsilyl)ethynyl]-1,4-cyclohexanediol (1)
N-(2-(2-((3-methoxy-4-(5-oxazolyl)phenyl)amino)-5-oxazolyl)phenyl)-N-methyl-4-morpholineacetamide (1)
Demethyl-desacetyl-rifamycinS (1)
N,N-Bis(2-chloroethyl)benzenemethanamine (1)
Butyl 4-{2,5-dioxo-3-[4-(3-phenyl-2-propen-1-yl)-1-piperazinyl]-1-pyrrolidinyl}benzoate (1)
3-(2-furyl)-4-(1-naphthyl)-1H-1,2,4-triazole-5-thione (1)
(-)-Virginiamycin M2 (1)
Maracen A (1)
2-Iodo-N-(1-Methylethyl)benzamide (1)
2,2'-Ethene-1,2-diylbis(5-methyl-1,3-benzoxazole) (1)
4-((3-(4-cyclohexylpiperazin-1-yl)-6-oxo-6H-anthra[1,9-cd]isoxazol-5-yl)amino)benzoic acid (1)
2-((1-(4-(azepan-1-ylsulfonyl)benzoyl)piperidin-4-yl)methyl)-1H-benzo[de]isoquinoline-1,3(2H)-dione (1)
N-[(4-{[(2-Methylphenyl)carbamoyl]amino}phenyl)acetyl]-L-leucyl-L- -aspartyl-L-valyl-L-proline (1)
Silanetriol (1)
Bismuth oxychloride (1)
N-{3-[4-(4-Methoxyphenyl)-1-piperazinyl]propyl}-2-(1-methyl-6-oxopyrido[2,3-e]pyrrolo[1,2-a]pyrazin-5(6H)-yl)acetamide (1)
1,4-Bis((3,4-dimethoxyphenyl)sulfonyl)-1,4-diazepane (1)
(2S,3S,4R,5R)-5-{6-[(2,2-Diphenylethyl)amino]-2-[({[2-(1-piperidinyl)ethyl]carbamoyl}amino)methyl]-9H-purin-9-yl}-N-ethyl-3,4-dihydroxytetrahydro-2-furancarboxamide (1)
(3R,3aS,6aR)-Hexahydrofuro[2,3-b]furan-3-yl {(2S,3R)-1-[4-(4-aminobutoxy)phenyl]-4-[(1,3-benzodioxol-5-ylsulfonyl)(isobutyl)amino]-3-hydroxy-2-butanyl}carbamate (1)
Egregiachloride A (1)
3-(4-CHLORO-2-ISOPROPYL-5-METHYLPHENOXYMETHYL)-4-METHOXYBENZALDEHYDE (1)
Menazon (1)

First Public Date

2025 (1)

Release Date

2025 (2)
2024 (1)
2023 (1)
2022 (1)
2021 (1)
2020 (1)
2018 (1)
2017 (1)

Lab affiliation

Associate Professor of Genetics Stanford University USA (5)
University of Arizona College of Medicine, Department of Medicine, Division of Endocrinology (2)
The University of NSW, Australia (1)
School of Biotechnology and Biomolecular Sciences, University of New South Wales, New South Wales, 2052, Australia (1)
PI. Associate Professor Department of Plant and Microbial Biology. UCB. (1)
Professor in Environmental Microbiology and Biotechnology,Section for Biotechnology Department of Chemistry and Bioscience, Aalborg University, Denmark (1)
Fertility & Research Centre, School of Clinical Medicine, Faculty of Medicine & Health, University of New South Wales, Australia (1)
University of Arizona College of Medicine & Cancer Center (1)
Department of Cellular and Molecular Medicine, University of Arizona, Tucson, AZ 85724 Asthma and Airway Disease Research Center, Tucson, AZ 85724 (1)
MS Proteomics Research Group, Institute of Organic Chemistry, Research Centre for Natural Sciences, Hungary (1)
Department of Cell and Molecular Pharmacology and Experimental Therapeutics, Medical University of South Carolina, Charleston, SC, USA (1)
Institut Pasteur, Université de Paris, CNRS USR2000, Proteomics Platform, Mass Spectrometry for Biology Unit, 75015 Paris, France (1)
Geriatrics and Gerontology, Department of Medicine, University of Wisconsin - Madison (1)
Medical University of Vienna / Department of Dermatology / Head of Skin & Endothelium Research Division (SERD) (1)
Dept of Chemistry, University of Illinois at Urbana-Champaign (1)
PR group, Biochemistry and Molecular Biology, University of Southern Denmark, Denmark (1)
Max Planck Institute of Immunobiology and Epigenetics Proteomics Unit Stuebeweg 51 79108 Freiburg, Germany (1)
Medical University of Vienna and Bruker Daltonik (1)
Medical University of Vienna Clinical Department of Laboratory Medicine Proteomics Core Facility, E5, LS5H Waehringer Guertel 18-20 A-1090 Wien, Austria Tel: +43 1 40400 53750 (1)
Proteomics Core Facility, Department of Laboratory Medicine, Medical University of Vienna (1)
Innovative Genomics Institute, Room 212C 2151 Berkeley Way Berkeley CA 94720 (1)
Associate Professor Department of Microbiology and Immunology The G.W. Hooper Research Foundation The University of California, at San Francisco 513 Parnassus Ave, HSW 1532, Box 0552 San Francisco, CA 94143 (1)
Stanford University (1)
Dept. of Biochemistry & Molecular Biology, Complex Carbohydrate Research Center, Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, GA 30602, United States Dept. of Biochemistry & Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, United States (1)
University of Pennsylvania (1)
Bacteriology Department, University of Wisconsin-Madison (1)
Professor Cellular and Molecular Medicine Department University of Arizona College of Medicine - Tucson (1)
Quantitative Proteomics & Proteome Center Tuebingen Interfaculty Institute for Cell Biology University of Tuebingen Tuebingen Germany (1)

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Confident identification of citrullinated peptides from P gingivalis

Porphyromonas gingivalis is a key pathogen in the development of chronic periodontitis and has recently been linked to the development of rheumatoid arthritis and Alzheimer’s disease. In this project the outer membrane vesicles (OMV) from Pg have been analyzed using a two-dimensional HFBA-based sepa...

ORGANISM(S): Porphyromonas gingivalis (strain ATCC BAA-308 / W83)

2019-11-22 | PXD015701 | Pride

3D LCMS using C18 functionality in all three dimensions (HFBA-pH10-Formic Acid)

3D LCMS using C18 functionality in all three dimensions (HFBA-pH10-Formic Acid). 1D LC-MS, 90 minutes; 2D LC-MS, 21 fractions x 90 minutes; 3D LC-MS, 126 fractions x 90 minutes. Jurkat cell digest.

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2016-01-25 | MSV000079480 | MassIVE

Hydrogen Bond and Dipole-Dipole Interaction Enabling Ultrastable, Quick Responding, and Self-Healing Proton Exchange Membranes for Fuel Cells.

Not available

S-EPMC11191563 | biostudies-literature

Per- and polyfluoroalkyl substances activate UPR pathway, induce steatosis and fibrosis in liver cells.

Not available

S-EPMC10092267 | biostudies-literature

The Theoretical and Experimental Investigation of the Fluorinated Palladium β-Diketonate Derivatives: Structure and Physicochemical Properties.

Not available

S-EPMC9000314 | biostudies-literature

6FDA-Based Co-Polyimide Membranes Incorporating Modulated MOF-808s for Olefin/Paraffin Gas Separations.

Not available

S-EPMC12566319 | biostudies-literature

Complete genomes of 22 bacterial strains isolated from polluted soil microbiota via enrichment on PFAS as a sole carbon source

PRJNA1314445 | ENA

Highly sensitive and wearable gas sensors consisting of chemically functionalized graphene oxide assembled on cotton yarn.

Not available

S-EPMC9079293 | biostudies-literature

Data set on stability comparison of emulsions stabilized by cationic fluorosurfactant against conventional surfactants and high thermal performance of fluoropolymer foams.

Not available

S-EPMC5480818 | biostudies-literature

In-depth characterization of the Clostridioides difficile phosphoproteome to identify Ser/Thr kinases substrates

Clostridioides difficile is the leading cause of intestinal nosocomial post-antibiotic infections in adults. During infection, the bacterium must rapidly respond and adapt to the host environment by using survival strategies. Protein phosphorylation is a reversible post-translational modification em...

ORGANISM(S): Peptoclostridium difficile (strain 630) (Clostridium difficile)

2022-12-08 | PXD029827 | Pride

Phosphoproteomics Qexactive hf Clostridium difficile Kinase

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49 Results

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