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TranscriptomicsBlood DNA methylation profiles in a Dutch population
Genome wide DNA methylation profiling of whole blood in schizophrenia patients and healthy subjects of different ages. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 480,000 CpGs. Dataset included 62 schizophrenia patie...
ORGANISM(S): Homo sapiens 
2012-10-19 | E-GEOD-41169 | biostudies-arrayexpress
TranscriptomicsCerebellum Illumina Inf 450 DNA methylation samples from HIV+ and HIV- human subjects
Genome wide DNA methylation profiles of cerebellum from HIV positive and HIV negative human subjects. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 486,000 CpGs. Dataset included 20 subjects from the USA. The epigenet...
ORGANISM(S): Homo sapiens 
2015-06-09 | E-GEOD-67748 | biostudies-arrayexpress
TranscriptomicsFrontal lobe (brain) Illumina Inf 450 DNA methylation samples from HIV+ and HIV- human subjects
Genome wide DNA methylation profiles of Frontal Lobe from HIV positive and HIV negative human subjects. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 486,000 CpGs. Dataset included 33 subjects from the USA. The epigen...
ORGANISM(S): Homo sapiens 
2015-06-09 | E-GEOD-67749 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of parotid tissue from Primary Sjögren’s Syndrome and controls
Primary Sjögren’s syndrome (pSS) is a chronic autoimmune disease with complex etiopathogenesis. Here we use Affymetrix U133 plus 2.0 microarray gene expression data from human parotid tissue. Parotid gland tissues were harvested from 17 pSS and 14 14 non-pSS sicca patients and 18 controls. The data ...
ORGANISM(S): Homo sapiens 
2012-09-06 | E-GEOD-40611 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiles of 30 tissues from a 112 year old woman
The main goal of the study was to measure the epigenetic age (also known as DNA methylation age) of these tissues. Toward this end, we used the epigenetic clock software described in Horvath S (n=2013) DNA methylation age of human tissues and cell types. Genome Biology.2013, 14:R115. DOI: 10.1186/10...
ORGANISM(S): Homo sapiens 
2015-06-03 | E-GEOD-64491 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiles of human brain tissue samples
The main goal of the study was to measure the epigenetic age (also known as DNA methylation age) of human tissues and to relate it to chronological age. Toward this end, we used the epigenetic clock software described in Horvath S (n=2013) DNA methylation age of human tissues and cell types. Genome ...
ORGANISM(S): Homo sapiens 
2015-06-03 | E-GEOD-64509 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiles of human blood samples from a severe developmental disorder and controls
Human DNA methylation Beadchip v1.2 was used to obtain n=113 Illumina DNA methylation array from whole blood samples. The main goal of the study was to measure the epigenetic age (also known as DNA methylation age) of subjects with a severe developmental disorder (known as syndrome X) and controls. ...
ORGANISM(S): Homo sapiens 
2015-05-28 | E-GEOD-64495 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiles of human bone samples
The main goal of the study was to measure the epigenetic age (also known as DNA methylation age) of human bone tissue and to relate it to chronological age. Toward this end, we used the epigenetic clock software described in Horvath S (2013) DNA methylation age of human tissues and cell types. Genom...
ORGANISM(S): Homo sapiens 
2015-06-03 | E-GEOD-64490 | biostudies-arrayexpress
TranscriptomicsWhole blood DNA methylation samples from HIV positive men [2012 study]
Genome wide DNA methylation profiles of whole blood from HIV positive men. The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 480,000 CpGs. Dataset included 24 subjects from the USA. This data set was used as validation set...
ORGANISM(S): Homo sapiens 
2015-06-09 | E-GEOD-53841 | biostudies-arrayexpress
TranscriptomicsDNA methylation levels of various brain regions from HIV+ and HIV- subjects
Genome wide DNA methylation profiles of various human brain regions (cerebellum, occipital lobe, etc). The Illumina Infinium 450k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 480,000 CpGs. The dataset includes 130 samples. Multiple brain region...
ORGANISM(S): Homo sapiens 
2015-06-09 | E-GEOD-59457 | biostudies-arrayexpress
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