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Proteomics
(7260)
Unknown
(4257)
Metabolomics
(822)
Genomics
(77)
Transcriptomics
(43)
Other
(24)
Methylation profiling
(5)
Multiomics
(2)
Clinical
(1)
Organisms
Homo sapiens
(108)
Mus musculus
(42)
Arabidopsis thaliana
(14)
Rattus norvegicus
(5)
Escherichia coli
(5)
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(5)
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(2)
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(2)
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(2)
standard reference vector pMCS
(2)
Brittonodoxa subpinnata
(2)
Theobroma cacao
(2)
Aeromonas hydrophila subsp. hydrophila ATCC 7966
(2)
Rattus rattus
(2)
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(1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
(1)
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(1)
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Ruminiclostridium cellobioparum subsp. termitidis CT1112
(1)
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Caenorhabditis elegans
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(1)
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(1)
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(1)
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(1)
Aspergillus niger CBS 513.88
(1)
Organisms
Homo sapiens
(16)
Sanghuangporus sanghuang
(7)
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(5)
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(1)
Ruminiclostridium cellobioparum subsp. termitidis CT1112
(1)
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(1)
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(1)
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(1)
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(1)
human gut metagenome
(1)
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(1)
Bacillus velezensis
(1)
mouse gut metagenome
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sediment metagenome
(1)
Repository
pride
(6757)
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MassIVE
(349)
ENA
(70)
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geo
(26)
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(25)
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Tissue
Cell culture
(1498)
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(426)
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(353)
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(254)
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(218)
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(171)
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(160)
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(147)
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(130)
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(130)
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(128)
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(119)
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(118)
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(117)
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(104)
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(102)
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(88)
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(88)
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(87)
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(74)
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(71)
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(70)
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(69)
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(69)
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(68)
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(12)
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(2)
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(2)
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(1)
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(1)
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Disease free
(179)
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(148)
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(122)
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(73)
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(49)
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(39)
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(38)
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(33)
Type 2 diabetes mellitus
(32)
COVID-19
(31)
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(29)
Wounds and Injuries
(28)
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(26)
Plasmodium falciparum malaria
(26)
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(23)
Hepatocellular carcinoma
(22)
Lymphoma
(22)
Parkinson's disease
(22)
Prostate adenocarcinoma
(21)
Multiple myeloma
(18)
Obesity
(18)
Glioblastoma
(17)
Influenza
(17)
Non-small cell lung carcinoma
(17)
Pancreatic cancer
(17)
Osteosarcoma
(16)
Amyotrophic lateral sclerosis
(14)
Reference
(1)
Peritoneal Metastases
(1)
Diabetes
(1)
Technology Type
Mass Spectrometry
(6758)
Shotgun proteomics
(3918)
Bottom-up proteomics
(1106)
Affinity purification coupled with mass spectrometry proteomics
(748)
Data-dependent acquisition
(651)
Mass spectrometry
(554)
Gel-based experiment
(455)
Data-independent acquisition
(302)
Top-down proteomics
(241)
SWATH MS
(236)
Mass spectrometry assay
(195)
Chemical cross-linking coupled with mass spectrometry proteomics
(188)
SRM/MRM
(109)
All-ion fragmentation
(36)
DiaPASEF
(26)
Mass spectrometry imaging
(24)
MSE
(22)
Affinity proteomics
(20)
NMR spectroscopy
(15)
HDMSE
(13)
Proteogenomics
(10)
Metaproteomics
(8)
Immunopeptidomics
(6)
Glycoproteomics
(4)
ESI
(1)
RNA mass spectrometry
(1)
Instrument Platform
Q Exactive
(55)
Exactive (Thermo Scientific)
(24)
Orbitrap Fusion
(24)
Q Exactive HF
(23)
MaXis
(13)
Impact
(11)
LTQ Orbitrap XL
(11)
LTQ Orbitrap
(8)
6520A Quadrupole Time-of-Flight LC/MS
(5)
Impact II
(5)
Amazon SL (Bruker Daltonics amaZon series)
(4)
6490 Triple Quadrupole LC/MS (Agilent)
(3)
6550 iFunnel Q-TOF LC/MS
(3)
6470 Triple Quadrupole LC/MS (Agilent instrument model)
(2)
Agilent software|1000689
(2)
Shimadzu Scientific Instruments instrument model|1000603
(2)
Xevo G2-XS QTof
(2)
Illumina HiSeq X
(1)
Illumina NovaSeq 6000
(1)
6495C Triple Quadrupole LC/MS
(1)
7820A/5977B GC/MS (Agilent instrument model)
(1)
ACQUITY UPLC I-Class
(1)
Agilent 1290 Infinity II HPLC system coupled to a qTOF 6550 ESI\/MS
(1)
Agilent 1290 Infinity II LC System (Agilent Technologies) coupled with a qTOF 6550 mass detector
(1)
Agilent 7200 GC-QTOF
(1)
ESI-qQTOF Impact II
(1)
HPLC-MS ESI low resolution (Thermo-Fischer)
(1)
LCMS-IT-TOF
(1)
LTQ Orbitrap|1000449
(1)
Orbitrap Exploris 120
(1)
Publication Date
2025
(1113)
2022
(995)
2024
(977)
2023
(971)
2021
(842)
2020
(657)
2026
(655)
2019
(555)
2018
(440)
2017
(308)
2016
(248)
2015
(167)
2014
(80)
2013
(35)
2012
(6)
2011
(4)
2010
(4)
2005
(4)
2027
(4)
2006
(3)
2009
(2)
2007
(2)
2004
(2)
2008
(1)
2002
(1)
UNIPROT ID/AC
A0A0M4JB57_TOBAC
(3)
A0A0M4JJI5_TOBAC
(3)
A0A0M4JNG5_TOBAC
(3)
A0A0M4JST5_TOBAC
(3)
A0A0M5KC92_TOBAC
(3)
A0A140G1P7_TOBAC
(3)
A0A140G1S2_TOBAC
(3)
A0A1S3X5A3_TOBAC
(3)
A0A1S3XBM4_TOBAC
(3)
A0A1S3XCV6_TOBAC
(3)
A0A1S3XE25_TOBAC
(3)
A0A1S3XHC2_TOBAC
(3)
A0A1S3XU47_TOBAC
(3)
A0A1S3XU77_TOBAC
(3)
A0A1S3XYI9_TOBAC
(3)
A0A1S3Y4V1_TOBAC
(3)
A0A1S3Y5A9_TOBAC
(3)
A0A1S3Y5T4_TOBAC
(3)
A0A1S3YIG1_TOBAC
(3)
A0A1S3YJX7_TOBAC
(3)
A0A1S3YNC4_TOBAC
(3)
A0A1S3YP64_TOBAC
(3)
A0A1S3YRF4_TOBAC
(3)
A0A1S3Z2K5_TOBAC
(3)
A0A1S3Z744_TOBAC
(3)
A0A1S3ZDG6_TOBAC
(3)
A0A1S3ZGD7_TOBAC
(3)
A0A1S3ZJA2_TOBAC
(3)
A0A1S3ZKW0_TOBAC
(3)
A0A1S4A1J2_TOBAC
(3)
ENSEMBL ID
ENSG00000147251
(3)
CHEBI ID
CHEBI:16335
(154)
CHEBI:30769
(149)
CHEBI:17368
(147)
CHEBI:15891
(143)
CHEBI:16704
(140)
CHEBI:16708
(128)
CHEBI:28044
(126)
CHEBI:17596
(125)
CHEBI:27897
(124)
CHEBI:15741
(122)
CHEBI:16919
(122)
CHEBI:16811
(117)
CHEBI:7916
(117)
CHEBI:17562
(115)
CHEBI:17568
(115)
CHEBI:18186
(114)
CHEBI:18257
(114)
CHEBI:16750
(113)
CHEBI:15428
(113)
CHEBI:17154
(113)
CHEBI:17750
(113)
CHEBI:16737
(113)
CHEBI:28300
(111)
CHEBI:16027
(111)
CHEBI:26271
(110)
CHEBI:25017
(110)
CHEBI:29016
(110)
CHEBI:30915
(109)
CHEBI:17822
(106)
CHEBI:6650
(106)
Metabolite Name
Hypoxanthine
(124)
Uridine
(112)
Taurine
(110)
Adenosine
(109)
Creatine
(107)
Inosine
(102)
Adenine
(101)
Creatinine
(98)
Uracil
(97)
Cytidine
(89)
Xanthine
(85)
L-Phenylalanine
(85)
L-Tryptophan
(83)
Ornithine
(82)
Guanosine
(82)
L-Tyrosine
(78)
L-Histidine
(77)
Citric acid
(77)
Betaine
(76)
Phenylalanine
(73)
L-Proline
(72)
Choline
(72)
Methionine
(71)
Guanine
(70)
Citrulline
(69)
L-Arginine
(69)
L-Glutamine
(68)
Xanthosine
(67)
Glutamine
(67)
Tyrosine
(66)
First Public Date
2025
(11)
2021
(11)
2019
(9)
2024
(8)
2026
(7)
2020
(5)
2023
(4)
2016
(4)
2014
(4)
2018
(3)
2022
(2)
2015
(1)
2013
(1)
Modification
4-tetrahydrothiazine-3-carboxylic acid
(19)
4x(15)N labeled L-arginine
(18)
2x(15)N labeled L-lysine
(15)
15.994915
(14)
57.021464
(11)
42.010565
(10)
N6
(9)
N6-dimethyl-L-lysine
(9)
-17.026549
(8)
Not available
(6)
79.966331
(5)
45.029395
(4)
+3amu)
(3)
-18.010565
(3)
58.005479
(3)
10.008269
(2)
4x(2)H labeled dimethylated residue
(2)
56.026215
(2)
6x(2)H labeled dimethylated L-arginine
(2)
0.984016
(1)
32.056407
(1)
3x(2)H labeled N6-acetyl-L-lysine
(1)
4
(1)
4-dinitrophenyl modified residue
(1)
4x(2)H labeled dimethylated L-lysine
(1)
59.036279
(1)
71.037114
(1)
Study status
Not yet recruiting
(1)
Study type
Transcription profiling by array
(23)
RNA-seq of coding RNA
(2)
Unknown experiment type
(1)
Cell line - High-throughput sequencing
(1)
Proteomic profiling by mass spectrometer
(1)
ChIP-chip by array
(1)
Proteomic profiling by array
(1)
Methylation profiling by high throughput sequencing
(1)
Interventional
(1)
Release Date
2022
(582)
2023
(499)
2021
(446)
2025
(440)
2020
(403)
2024
(366)
2019
(314)
2018
(274)
2017
(171)
2015
(130)
2016
(120)
2014
(107)
2013
(88)
2026
(67)
2012
(65)
2011
(60)
2010
(45)
2009
(26)
2008
(25)
2007
(24)
2005
(11)
2006
(10)
2004
(5)
2003
(4)
2000
(2)
2002
(1)
1999
(1)
1998
(1)
1997
(1)
Lab affiliation
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA
(68)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry
(30)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany
(22)
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany
(21)
University of Edinburgh
(21)
Functional Proteomics, ICR
(18)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany
(16)
University of Oxford
(15)
The Institute of Cancer Research
(14)
Proteomics Core Facility, Biozentrum, University of Basel, Switzerland
(12)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom
(11)
Associate Member Developmental Neurobiology St. Jude Children's Research Hospital
(10)
Associate Member, St. Jude Faculty Developmental Neurobiology St. Jude Children's Research Hospital Memphis, TN-38105
(10)
Head Proteomics Group, Leiden University Medical Center, Center for Proteomics and Metabolomics, PO Box 9600, Postal zone P1-Q, 2300 RC Leiden, The Netherlands
(10)
NCI/NIH CSB
(10)
St Jude Children's Research Hospital
(10)
The University of Melbourne
(10)
Brigham and Women's Hospital, Harvard Medical School
(9)
Centre for Proteome Research, University of Liverpool, Liverpool, UK
(9)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea.
(9)
Division of Cell Matrix Biology & Regenerative Medicine (L5) / Division of Cell Matrix Biology & Regenerative Medicine, University of Manchester
(9)
Donnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada
(9)
Biozentrum, University of Basel, Switzerland
(8)
Cornell University
(8)
Department of Inflammation and Immunity, Gastroenterology and Hepatology. Cleveland Clinic, Cleveland Ohio, USA
(8)
Harvard Medical School
(8)
Institute of Cancer Research, London
(8)
Institute of Molecular Biology (IMB)
(8)
Massachusetts Institute of Technology
(8)
University of Warwick
(8)
Location
Australia
(1)
Tags
xref:PubMed:31537639
(7)
xref:PubMed:35814248
(1)
xref:PubMed:25050888
(1)
xref:PubMed:32695436
(1)
xref:PubMed:32593184
(1)
xref:PubMed:27215540
(1)
xref:PubMed:21838877
(1)
xref:PubMed:40291136
(1)
xref:PubMed:162125
(1)
xref:PubMed:19367707
(1)
xref:PubMed:29096248
(1)
xref:PubMed:41184738
(1)
xref:PubMed:40016272
(1)
xref:PubMed:20050969
(1)
xref:PubMed:41327614
(1)
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Identification of unusual phospholipids from bovine heart mitochondria by HPLC-MS/MS.
Not available
S-EPMC7707168
|
biostudies-literature
Cite
Phase II Metabolism of Asarone Isomers In Vitro and in Humans Using HPLC-MS/MS and HPLC-qToF/MS.
Not available
S-EPMC8467817
|
biostudies-literature
Cite
Green Extraction of Alkaloids and Polyphenols from Peumus boldus Leaves with Natural Deep Eutectic Solvents and Profiling by HPLC-PDA-IT-MS/MS and HPLC-QTOF-MS/MS.
Not available
S-EPMC7076633
|
biostudies-literature
Cite
Semisynthesis of Stable Isotope-Labeled Ergot Alkaloids for HPLC-MS/MS Analysis.
Not available
S-EPMC12291449
|
biostudies-literature
Cite
Rapid Characterization of Triterpene Saponins from Zornia brasiliensis by HPLC-ESI-MS/MS.
Not available
S-EPMC6680687
|
biostudies-literature
Cite
Metabolomics-based profiling of 4 avocado varieties using HPLC-MS/MS and GC/MS and evaluation of their antidiabetic activity.
Not available
S-EPMC8943142
|
biostudies-literature
Cite
Quantification of Hydrazine in Human Urine by HPLC-MS-MS.
Not available
S-EPMC5098214
|
biostudies-literature
Cite
Microwave-Assisted Extraction of Multiple Trace Levels of Intermediate Metabolites for Camptothecin Biosynthesis in Camptotheca acuminata and Their Simultaneous Determination by HPLC-LTQ-Orbitrap-MS/MS and HPLC-TSQ-MS.
Not available
S-EPMC6413206
|
biostudies-literature
Cite
The pathogenicity of novel GUCY2D mutations in Leber congenital amaurosis 1 assessed by HPLC-MS/MS.
Not available
S-EPMC7138296
|
biostudies-literature
Cite
Development of a HPLC-MS/MS method for assessment of thiol redox status in human tear fluids.
Not available
S-EPMC8384703
|
biostudies-literature
Cite
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