Hplc-ms-ms - OmicsDI

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Proteomics (7260)
Unknown (4257)
Metabolomics (823)
Genomics (77)
Transcriptomics (43)
Other (24)
Methylation profiling (5)
Multiomics (2)
Clinical (1)

Organisms

Homo sapiens (108)
Mus musculus (42)
Arabidopsis thaliana (14)
Rattus norvegicus (5)
Escherichia coli (5)
Staphylococcus aureus (5)
Bos taurus (4)
Vitis vinifera (2)
Hordeum vulgare (2)
Oryctolagus cuniculus (2)
standard reference vector pMCS (2)
Brittonodoxa subpinnata (2)
Theobroma cacao (2)
Aeromonas hydrophila subsp. hydrophila ATCC 7966 (2)
Rattus rattus (2)
Zymomonas mobilis (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Burkholderia cenocepacia (1)
Streptomyces seoulensis (1)
Ruminiclostridium cellobioparum subsp. termitidis CT1112 (1)
Capsicum annuum (1)
Oryza sativa (1)
Caenorhabditis elegans (1)
Ctenopharyngodon idella (1)
Eudistoma vannamei (1)
Euphorbia dendroides (1)
Nicotiana attenuata (1)
Ribes nigrum (1)
Streptomyces sp. (1)
Aspergillus niger CBS 513.88 (1)

Organisms

Homo sapiens (16)
Sanghuangporus sanghuang (7)
Mus musculus (5)
Pericallis cruenta (1)
Ruminiclostridium cellobioparum subsp. termitidis CT1112 (1)
Streptomyces seoulensis (1)
Lysinibacillus (1)
Pseudogymnoascus australis (1)
Hordeum vulgare (1)
Polygonatum kingianum (1)
Streptomyces (1)
Capsicum annuum (1)
Caenorhabditis elegans (1)
Oryza sativa (1)
human gut metagenome (1)
Vitis vinifera (1)
Bacillus velezensis (1)
mouse gut metagenome (1)
Rattus norvegicus (1)
sediment metagenome (1)

Repository

pride (6757)
MetaboLights (755)
MassIVE (349)
ENA (70)
iProX (69)
GNPS (62)
jPOST (61)
biostudies-arrayexpress (31)
geo (26)
PanoramaPublic (25)
PeptideAtlas (13)
PAXDB (6)
NODE (5)
MetabolomicsWorkbench (2)
EGA (1)

Tissue

Cell culture (1498)
Epithelial cell (426)
Brain (353)
Permanent cell line cell (254)
Liver (218)
Blood plasma (171)
Blood (160)
Plant cell (147)
Fibroblast (130)
Leaf (130)
Whole body (128)
Lung (119)
Kidney (118)
Cell suspension culture (117)
T cell (104)
Heart (102)
Blood cell (88)
Skin (88)
Blood serum (87)
Colon (74)
Hepatocyte (71)
Testis (70)
Bone marrow (69)
Macrophage (69)
Primary cell (68)
Others (12)
Blood (2)
Leaf (2)
Root (2)
Cell line (1)

Disease

Disease free (179)
Breast cancer (148)
Colon cancer (122)
Acute leukemia (73)
Alzheimer's disease (49)
Malignant neoplasm of ovary (39)
Cervix carcinoma (38)
Cardiovascular system disease (33)
Type 2 diabetes mellitus (32)
COVID-19 (31)
Melanoma (29)
Wounds and Injuries (28)
Brain cancer (26)
Plasmodium falciparum malaria (26)
Lung cancer (23)
Hepatocellular carcinoma (22)
Lymphoma (22)
Parkinson's disease (22)
Prostate adenocarcinoma (21)
Multiple myeloma (18)
Obesity (18)
Glioblastoma (17)
Influenza (17)
Non-small cell lung carcinoma (17)
Pancreatic cancer (17)
Osteosarcoma (16)
Amyotrophic lateral sclerosis (14)
Reference (1)
Peritoneal Metastases (1)
Diabetes (1)

Technology Type

Mass Spectrometry (6759)
Shotgun proteomics (3918)
Bottom-up proteomics (1106)
Affinity purification coupled with mass spectrometry proteomics (748)
Data-dependent acquisition (651)
Mass spectrometry (554)
Gel-based experiment (455)
Data-independent acquisition (302)
Top-down proteomics (241)
SWATH MS (236)
Mass spectrometry assay (195)
Chemical cross-linking coupled with mass spectrometry proteomics (188)
SRM/MRM (109)
All-ion fragmentation (36)
DiaPASEF (26)
Mass spectrometry imaging (24)
MSE (22)
Affinity proteomics (20)
NMR spectroscopy (15)
HDMSE (13)
Proteogenomics (10)
Metaproteomics (8)
Immunopeptidomics (6)
Glycoproteomics (4)
ESI (2)
RNA mass spectrometry (1)

Instrument Platform

Q Exactive (55)
Exactive (Thermo Scientific) (24)
Orbitrap Fusion (24)
Q Exactive HF (23)
MaXis (13)
Impact (11)
LTQ Orbitrap XL (11)
LTQ Orbitrap (8)
6520A Quadrupole Time-of-Flight LC/MS (5)
Impact II (5)
Amazon SL (Bruker Daltonics amaZon series) (4)
6490 Triple Quadrupole LC/MS (Agilent) (3)
6550 iFunnel Q-TOF LC/MS (3)
6470 Triple Quadrupole LC/MS (Agilent instrument model) (2)
Agilent software|1000689 (2)
Shimadzu Scientific Instruments instrument model|1000603 (2)
Xevo G2-XS QTof (2)
Illumina HiSeq X (1)
Illumina NovaSeq 6000 (1)
6495C Triple Quadrupole LC/MS (1)
7820A/5977B GC/MS (Agilent instrument model) (1)
ACQUITY UPLC I-Class (1)
Agilent 1290 Infinity II HPLC system coupled to a qTOF 6550 ESI\/MS (1)
Agilent 1290 Infinity II LC System (Agilent Technologies) coupled with a qTOF 6550 mass detector (1)
Agilent 7200 GC-QTOF (1)
ESI-qQTOF Impact II (1)
HPLC-MS ESI low resolution (Thermo-Fischer) (1)
LCMS-IT-TOF (1)
LTQ Orbitrap|1000449 (1)
Orbitrap Exploris 120 (1)

Publication Date

2025 (1113)
2022 (995)
2024 (977)
2023 (971)
2021 (842)
2020 (657)
2026 (655)
2019 (555)
2018 (440)
2017 (308)
2016 (248)
2015 (167)
2014 (80)
2013 (35)
2012 (6)
2011 (4)
2010 (4)
2005 (4)
2027 (4)
2006 (3)
2009 (2)
2007 (2)
2004 (2)
2008 (1)
2002 (1)

UNIPROT ID/AC

A0A0M4JB57_TOBAC (3)
A0A0M4JJI5_TOBAC (3)
A0A0M4JNG5_TOBAC (3)
A0A0M4JST5_TOBAC (3)
A0A0M5KC92_TOBAC (3)
A0A140G1P7_TOBAC (3)
A0A140G1S2_TOBAC (3)
A0A1S3X5A3_TOBAC (3)
A0A1S3XBM4_TOBAC (3)
A0A1S3XCV6_TOBAC (3)
A0A1S3XE25_TOBAC (3)
A0A1S3XHC2_TOBAC (3)
A0A1S3XU47_TOBAC (3)
A0A1S3XU77_TOBAC (3)
A0A1S3XYI9_TOBAC (3)
A0A1S3Y4V1_TOBAC (3)
A0A1S3Y5A9_TOBAC (3)
A0A1S3Y5T4_TOBAC (3)
A0A1S3YIG1_TOBAC (3)
A0A1S3YJX7_TOBAC (3)
A0A1S3YNC4_TOBAC (3)
A0A1S3YP64_TOBAC (3)
A0A1S3YRF4_TOBAC (3)
A0A1S3Z2K5_TOBAC (3)
A0A1S3Z744_TOBAC (3)
A0A1S3ZDG6_TOBAC (3)
A0A1S3ZGD7_TOBAC (3)
A0A1S3ZJA2_TOBAC (3)
A0A1S3ZKW0_TOBAC (3)
A0A1S4A1J2_TOBAC (3)

ENSEMBL ID

ENSG00000147251 (3)

CHEBI ID

CHEBI:16335 (154)
CHEBI:30769 (149)
CHEBI:17368 (147)
CHEBI:15891 (143)
CHEBI:16704 (140)
CHEBI:16708 (128)
CHEBI:28044 (126)
CHEBI:17596 (125)
CHEBI:27897 (124)
CHEBI:15741 (122)
CHEBI:16919 (122)
CHEBI:16811 (117)
CHEBI:7916 (117)
CHEBI:17562 (115)
CHEBI:17568 (115)
CHEBI:18186 (114)
CHEBI:18257 (114)
CHEBI:16750 (113)
CHEBI:15428 (113)
CHEBI:17154 (113)
CHEBI:17750 (113)
CHEBI:16737 (113)
CHEBI:28300 (111)
CHEBI:16027 (111)
CHEBI:26271 (110)
CHEBI:25017 (110)
CHEBI:29016 (110)
CHEBI:30915 (109)
CHEBI:17822 (106)
CHEBI:6650 (106)

Metabolite Name

Hypoxanthine (124)
Uridine (112)
Taurine (110)
Adenosine (109)
Creatine (107)
Inosine (102)
Adenine (101)
Creatinine (98)
Uracil (97)
Cytidine (89)
Xanthine (85)
L-Phenylalanine (85)
L-Tryptophan (83)
Ornithine (82)
Guanosine (82)
L-Tyrosine (78)
L-Histidine (77)
Citric acid (77)
Betaine (76)
Phenylalanine (73)
L-Proline (72)
Choline (72)
Methionine (71)
Guanine (70)
Citrulline (69)
L-Arginine (69)
L-Glutamine (68)
Xanthosine (67)
Glutamine (67)
Tyrosine (66)

First Public Date

2025 (11)
2021 (11)
2019 (9)
2024 (8)
2026 (7)
2020 (5)
2023 (4)
2016 (4)
2014 (4)
2018 (3)
2022 (2)
2015 (1)
2013 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (19)
4x(15)N labeled L-arginine (18)
2x(15)N labeled L-lysine (15)
15.994915 (14)
57.021464 (11)
42.010565 (10)
N6 (9)
N6-dimethyl-L-lysine (9)
-17.026549 (8)
Not available (6)
79.966331 (5)
45.029395 (4)
+3amu) (3)
-18.010565 (3)
58.005479 (3)
10.008269 (2)
4x(2)H labeled dimethylated residue (2)
56.026215 (2)
6x(2)H labeled dimethylated L-arginine (2)
0.984016 (1)
32.056407 (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
4 (1)
4-dinitrophenyl modified residue (1)
4x(2)H labeled dimethylated L-lysine (1)
59.036279 (1)
71.037114 (1)

Study status

Not yet recruiting (1)

Study type

Transcription profiling by array (23)
RNA-seq of coding RNA (2)
Unknown experiment type (1)
Cell line - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
ChIP-chip by array (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)
Interventional (1)

Release Date

2022 (582)
2023 (499)
2021 (446)
2025 (440)
2020 (403)
2024 (366)
2019 (314)
2018 (274)
2017 (171)
2015 (130)
2016 (120)
2014 (107)
2013 (88)
2026 (67)
2012 (65)
2011 (60)
2010 (45)
2009 (26)
2008 (25)
2007 (24)
2005 (11)
2006 (10)
2004 (5)
2003 (4)
2000 (2)
2002 (1)
1999 (1)
1998 (1)
1997 (1)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (68)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (30)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (22)
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany (21)
University of Edinburgh (21)
Functional Proteomics, ICR (18)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (16)
University of Oxford (15)
The Institute of Cancer Research (14)
Proteomics Core Facility, Biozentrum, University of Basel, Switzerland (12)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (11)
Associate Member Developmental Neurobiology St. Jude Children's Research Hospital (10)
Associate Member, St. Jude Faculty Developmental Neurobiology St. Jude Children's Research Hospital Memphis, TN-38105 (10)
Head Proteomics Group, Leiden University Medical Center, Center for Proteomics and Metabolomics, PO Box 9600, Postal zone P1-Q, 2300 RC Leiden, The Netherlands (10)
NCI/NIH CSB (10)
St Jude Children's Research Hospital (10)
The University of Melbourne (10)
Brigham and Women's Hospital, Harvard Medical School (9)
Centre for Proteome Research, University of Liverpool, Liverpool, UK (9)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (9)
Division of Cell Matrix Biology & Regenerative Medicine (L5) / Division of Cell Matrix Biology & Regenerative Medicine, University of Manchester (9)
Donnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (9)
Biozentrum, University of Basel, Switzerland (8)
Cornell University (8)
Department of Inflammation and Immunity, Gastroenterology and Hepatology. Cleveland Clinic, Cleveland Ohio, USA (8)
Harvard Medical School (8)
Institute of Cancer Research, London (8)
Institute of Molecular Biology (IMB) (8)
Massachusetts Institute of Technology (8)
University of Warwick (8)

Location

Australia (1)

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Application of HPLC-PDA-MS metabolite profiling to investigate the effect of growth temperature and day length on blackcurrant fruit

INTRODUCTION: Blackcurrant (Ribes nigrum L.) is an excellent example of a “super fruit” with potential health benefits. Both genotype and cultivation environment are known to affect the chemical composition of blackcurrant, especially ascorbic acid and various phenolic compounds. Environmental condi...

2019-02-12 | MTBLS773 | MetaboLights

Metabolome analysis via an HPLC-ESI-MS-based experimental and computational pipeline for chronic nephron toxicity profiling

Untargeted metabolomics has the potential to improve the predictivity of in vitro toxicity models and therefore may aid the reduction of expensive and laborious animal models. Here we describe a chronic nephrotoxicity study conducted on a human renal proximal tubular epithelial cell line (RPTEC/TERT...

2015-09-07 | MTBLS140 | MetaboLights

A large-scale metabolomics study to harness chemical diversity and explore biochemical mechanisms in ryegrass (HPLC-MS Hypercarb reverse phase NEG assay)

Perennial ryegrass (Lolium perenne) is integral to temperate pastoral agriculture, which contributes most of the milk and meat production worldwide. Chemical profiles and diversity of ryegrass offer several opportunities to harness specific traits and elucidate underlying biological mechanism...

2019-03-01 | MTBLS529 | MetaboLights

HPLC-(Q)-TOF-MS based study of plasma metabolic profiles differences associated with age in paediatric population using animal model

Not available

ORGANISM(S): Sus scrofa

ST001427 | MetabolomicsWorkbench

Identification of unusual phospholipids from bovine heart mitochondria by HPLC-MS/MS.

Not available

S-EPMC7707168 | biostudies-literature

Phase II Metabolism of Asarone Isomers In Vitro and in Humans Using HPLC-MS/MS and HPLC-qToF/MS.

Not available

S-EPMC8467817 | biostudies-literature

Green Extraction of Alkaloids and Polyphenols from Peumus boldus Leaves with Natural Deep Eutectic Solvents and Profiling by HPLC-PDA-IT-MS/MS and HPLC-QTOF-MS/MS.