Hu Ge G - OmicsDI

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Unknown (496)
Transcriptomics (80)
Proteomics (30)
Genomics (9)
Metabolomics (6)

Organisms

Homo sapiens (52)
Schizophyllum commune H4-8 (21)
Mycobacterium tuberculosis SP7 (21)
Oryza sativa Japonica Group (21)
Candidatus Endoriftia persephonae (21)
Mycobacterium tuberculosis SP10 (21)
Mycobacterium tuberculosis SP13 (21)
Mycobacterium tuberculosis SP22 (21)
Enterobacter ludwigii (21)
Chlamydomonas reinhardtii (21)
Lama (21)
Pyricularia oryzae P131 (21)
Mus musculus (14)
Plasmodium falciparum 3D7 (6)
Saccharomyces cerevisiae (3)
Rattus norvegicus (3)
Solenopsis invicta (2)
Rhodopseudomonas palustris (1)
Urocitellus parryii (1)
Oncorhynchus nerka (1)
Arabidopsis lyrata (1)
Prunus persica (1)
Brassica napus (1)
Pseudomonas aeruginosa (1)
Escherichia coli (1)
Gallus gallus (1)
Sus scrofa (1)
Drosophila melanogaster (1)
Danio rerio (1)
Arabidopsis thaliana (1)

Organisms

Plasmodium falciparum 3D7 (6)

Repository

biostudies-arrayexpress (84)
pride (21)
iProX (9)
MetaboLights (6)
ENA (6)

Tissue

Blood serum (3)
Cell culture (3)
HeLa cell (2)
Blood (2)
Rheumatoid arthritis disease specific synovial fluid (1)
Prostate cancer cell (1)
Lung epithelium (1)
Breast adenocarcinoma cell line (1)
Embryonic fibroblast (1)
Microglial cell (1)
Stomach (1)
Breast (1)
Blood plasma (1)
Whole body (1)
Leaf (1)
Fibroblast (1)
Hepatocyte (1)
Lung (1)
Liver (1)
Blood cell (1)

Disease

Disease free (2)
Stomach cancer (1)
Non-small cell lung carcinoma (1)
Prostate cancer (1)

Technology Type

Mass Spectrometry (21)
Shotgun proteomics (8)
Bottom-up proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Mass spectrometry assay (2)
Mass spectrometry (2)
Data-independent acquisition (2)
Gel-based experiment (2)
Data-dependent acquisition (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
NMR spectroscopy assay (1)
NMR spectroscopy (1)
Affinity proteomics (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Illumina NovaSeq 6000 (2)
Nuclear Magnetic Resonance (NMR) (2)
Liquid Chromatography MS - - reverse phase (2)
Liquid Chromatography MS - positive - hilic (2)
10X Genomics Chromium (1)
NextSeq 550 (1)
Illumina HiSeq 2000 (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2012 (17)
2013 (13)
2011 (11)
2010 (10)
2025 (9)
2016 (8)
2014 (8)
2015 (6)
2024 (6)
2023 (5)
2018 (5)
2019 (4)
2021 (3)
2009 (3)
2008 (3)
2022 (3)
2026 (3)
2020 (1)

CHEBI ID

CHEBI:16870 (3)
CHEBI:15741 (3)
CHEBI:15891 (3)
CHEBI:16919 (3)
CHEBI:15354 (3)
CHEBI:17368 (3)
CHEBI:18132 (2)
CHEBI:25094 (2)
CHEBI:18295 (2)
CHEBI:16977 (2)
CHEBI:17154 (2)
CHEBI:16865 (2)
CHEBI:17568 (2)
CHEBI:7916 (2)
CHEBI:80774 (2)
CHEBI:32816 (2)
CHEBI:16027 (2)
CHEBI:16761 (2)
CHEBI:78320 (2)
CHEBI:16737 (2)
CHEBI:16414 (2)
CHEBI:17596 (2)
CHEBI:17712 (2)
CHEBI:9410 (2)
CHEBI:28865 (2)
CHEBI:89929 (2)
CHEBI:17687 (2)
CHEBI:20067 (2)
CHEBI:175096 (1)
CHEBI:191992 (1)

Metabolite Name

AMP (2)
Niacinamide (2)
ADP (2)
Choline (2)
Taurine (2)
Histamine (2)
Glycerophosphocholine (2)
L-Valine (2)
Hypoxanthine (2)
(3beta,4alpha,5alpha,23E)-4-Methylergosta-7,23-dien-3-ol (1)
3-Mercaptohexyl pentanoate (1)
()-2-(2-Furanyl)pyrrolidine (1)
Glycohyodeoxycholic acid (1)
3-ketocholic acid (1)
Taurodeoxycholic acid (1)
Ursodeoxycholic acid (1)
(3beta,4beta,5alpha)-4-Methylergosta-7,24(28)-dien-3-ol (1)
3-Hydroxyisobutyrate (1)
2-Amino-3,8-dimethyl-3H-imidazo[4,5-f]quinoxaline (1)
Taurochenodeoxycholic acid (1)
Glycochenodeoxycholic acid (1)
Glycocholic acid (1)
SM(d18:1/26:1(17Z)) (1)
4-Aminobutyrate (1)
2-Hydroxyisovalerate (1)
22,23-Dihydroergosterol (1)
Acetylhydrazine (1)
Dihydro-2,4-dimethyl-6-(1-methylpropyl)-4H-1,3,5-dithiazine (1)
2,6-Diethylaniline (1)
1-Hexanethiol (1)

First Public Date

2014 (6)

Classification

protozoa (6)

Study type

Transcription profiling by array (47)
Comparative genomic hybridization by array (7)
Methylation profiling by array (6)
RNA-seq of coding RNA (4)
ChIP-chip by tiling array (3)
ChIP-chip by array (3)
Other (3)
Human - Two-color microarray (2)
ChIP-seq (2)
Cell line - High-throughput sequencing (1)
Genotyping by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (71)
2022 (62)
2024 (60)
2023 (56)
2021 (44)
2020 (35)
2019 (31)
2015 (30)
2018 (28)
2013 (27)
2016 (25)
2012 (25)
2017 (25)
2014 (19)
2011 (14)
2010 (12)
2009 (7)
2026 (6)
2008 (3)

Lab affiliation

State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan, Hubei,China (2)
Targeting DNA repair in systemic and radiation cancer therapy II.Medical Oncology Dept, Radiotherapy and Radiooncology Dept Research team leader: DSB repair in tumors Mildred Scheel Nachwuchszentrum HaTriCS4 (1)
Team Lead in Proteomics Head of the Proteomics Research Translational Technology Platform, UCL Cancer Institute, Paul O’Gorman Building 72 Huntley Street, London, WC1E 6DD, UK (1)
Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization, Ministry of Agriculture, Guangzhou, China. (1)
Institute of Medical Biology, Chinese Academy of Medical Sciences, Peking Union Medical College, Kunming, China；State Key Laboratory of Medical Molecular Biology, Department of Molecular Biology and Biochemistry, Institute of Basic Medical Sciences, Medical Primate Research Center, Neuroscience Center, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, China (1)
Institute of Medical Biology, Chinese Academy of Medical Sciences, Peking Union Medical College, Kunming, China State Key Laboratory of Medical Molecular Biology, Department of Molecular Biology and Biochemistry, Institute of Basic Medical Sciences, Medical Primate Research Center, Neuroscience Center, Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, China (1)
Centre for Medicines Discovery & Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK (1)
Biomolecular Mass Spectrometry and Proteomics,Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, The Netherlands Netherlands Proteomics Center, Padualaan 8, Utrecht 3584 CH, the Netherlands (1)
Key Laboratory of Insect Developmental and Evolutionary Biology, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China (1)
College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China (1)
Clinical Medical Research Center, The Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), Shenzhen, Guangdong;Department of Nephrology, The University of Hong Kong-Shenzhen Hospital, Shenzhen, Guangdong (1)
1. State Key Laboratory of Genetic Evolution & Animal Models, Key Laboratory of Healthy Aging Research of Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650201, China 2. University of Chinese Academy of Sciences, Beijing 100101, China 3. KIZ/CUHK Joint Laboratory of Bioresources and Molecular Research in Common Diseases, Kunming 650201, China (1)
Key Laboratory of Molecular Epigenetics of the Ministry of Education (MOE), Northeast Normal University (1)
Nurturing Station for the State Key Laboratory of Subtropical Silviculture, Zhejiang A 20 & F University, Dong Hu Campus, 88 Northern Circle Road, Linan 311300, China. (1)
Center for Translational & Computational Neuroimmunology Department of Neurology 622 West 168th street New York, NY 10032 (1)
Institute of Chemistry, Academia Sinica, Taiwan (1)
National Center for Protein Sciences (The PHOENIX center, Beijing) (1)
Moffitt Cancer Center Tampa, FL, USA (1)
The First Affiliated Hospital, College of Medicine, Zhejiang University.310003, Qingchun Road, Hangzhou, China (1)
College of Veterinary Medicine, Henan Agricultural University, Zhengzhou, China (1)

Tags

pathogen:protozoan (6)
pathogen (6)

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IHF and HU gene expression in E coli K12

IHF and HU are two heterodimeric nucleoid associated proteins (NAP) that belong to the same protein family but interact differently with the DNA. IHF is a sequence-specific DNA-binding protein that bends the DNA by over 160o. HU is the most conserved NAP which binds non-specifically to duplex DNA wi...

ORGANISM(S): Escherichia coli

2011-11-30 | E-MEXP-3461 | biostudies-arrayexpress

The surface passivation of Ge(100) and Ge(111) anodes in Ge-air batteries with different doping types and concentrations.

Not available

S-EPMC9076083 | biostudies-literature

S phase and HU profiles in wild-type and mutant cells

Total S phase was measured for wild-type cells undergoing meiS and mitS. Early replication origins were mapped in mitS in wild-type cells, and in meiS for wild-type, sml1 delete, rec8 delete and spo11 delete cells. Comparative genome hybridization was used to measure the kinetics and final extent of...

ORGANISM(S): Saccharomyces cerevisiae

2012-06-18 | E-GEOD-35662 | biostudies-arrayexpress

Promoting Ge Alloying Reaction via Heterostructure Engineering for High Efficient and Ultra-Stable Sodium-Ion Storage.

Not available

S-EPMC7675052 | biostudies-literature

Genetic Diversity and Selection Signal Analysis of Hu Sheep Based on SNP50K BeadChip.

Not available

S-EPMC11476051 | biostudies-literature

Characterization of BoHV-1 gG-/tk-/gE- Mutant in Differential Protein Expression, Virulence, and Immunity.

Not available

S-EPMC8621285 | biostudies-literature

Separation of DNA replication from the assembly of break-competent meiotic chromosomes

The meiotic cell division reduces the chromosome number from diploid to haploid to form gametes for sexual reproduction. Although much progress has been made in understanding meiotic recombination and the two meiotic divisions, the processes leading up to recombination, including the prolonged pre-m...

ORGANISM(S): Saccharomyces cerevisiae

2012-06-14 | E-GEOD-35667 | biostudies-arrayexpress

Identification of differentially expressed genes in fibroblasts derived from patients with Dupuytren's Contracture

Dupuytren's contracture (DC) is the most common inherited connective tissue disease of humans and is hypothesized to be associated with aberrant wound healing of the palmar fascia. Fibroblasts and myofibroblasts are believed to play an important role in the genesis of DC and the fibroproliferation a...

ORGANISM(S): Homo sapiens

2010-04-16 | E-GEOD-21221 | biostudies-arrayexpress

S-phase arrest after vincristine treatment may promote hepatitis B virus replication.

Not available

S-EPMC4316092 | biostudies-literature

LncRNA/mRNA expression profiling for THP-1 macrophages and THP-1 macrophage-derived foam cells

By identifying differentially expressed LncRNAs/mRNAs in THP-1 macrophages and THP-1 macrophage-derived foam cells, we select some differentially expressed LncRNAs and explore their roles in atherosclerosis process. We already find that some LncRNA can effect cholesterol metabolism and level of infl...

ORGANISM(S): Homo sapiens

2014-05-20 | E-GEOD-54039 | biostudies-arrayexpress

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622 Results

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