Huang Ai A - OmicsDI

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Unknown (1739)
Proteomics (24)
Transcriptomics (13)
Models (12)
Metabolomics (5)
Genomics (2)

Organisms

Mycobacterium tuberculosis SP7 (16)
Mycobacterium tuberculosis SP10 (16)
Mycobacterium tuberculosis SP13 (16)
Mycobacterium tuberculosis SP22 (16)
Chlamydomonas reinhardtii (16)
Enterococcus mundtii CRL35 (16)
Oncorhynchus tshawytscha (16)
Pseudomonas canadensis (16)
Human alphaherpesvirus 1 strain 17 (16)
Mycobacterium tuberculosis SP1 (16)
Marchantia polymorpha subsp. ruderalis (16)
Methylocystis sp. (16)
Exiguobacterium sp. SH31 (16)
Palaemonetes sp. common grass shrimp associated circular virus (16)
Amaranthus tricolor (16)
Spirochaeta sp. ELBA (16)
Clavibacter nebraskensis NCPPB 2581 (16)
Porites pukoensis (16)
Porphyromonas gingivalis (16)
Leishmania tarentolae (16)
Porphyromonas gingivalis W83 (16)
Human betaherpesvirus 5 (16)
Bothrops insularis (16)
Bothrops jararaca (16)
Bothrops jararacussu (16)
Homo sapiens (8)
Mus musculus (6)
Arabidopsis thaliana (4)
Apis mellifera (1)
Solanum lycopersicum (1)

Repository

pride (16)
biostudies-arrayexpress (14)
BioModels (12)
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iProX (4)
MassIVE (3)
EGA (1)
PanoramaPublic (1)

Tissue

Lung (3)
Blood plasma (2)
Spleen (2)
Primary cell (2)
Cell culture (2)
Kidney glomerular epithelial cell (1)
PanIN cell (1)
Epithelium of pancreatic duct (1)
Rectum (1)
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Cecum (1)
Pancreatic ductal adenocarcinoma cell (1)
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Epithelial cell of lung (1)
Uterine endometrium (1)
Prostate cancer cell line (1)
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Sputum (1)
Stomach (1)
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Urine (1)
Early embryonic cell (1)
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Heart (1)
Bronchoalveolar lavage (1)
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Leaf (1)
Fibroblast (1)

Disease

Polycystic kidney disease (1)
Non-small cell lung carcinoma (1)
Pancreatic ductal adenocarcinoma (1)
Cardiovascular system disease (1)

Technology Type

Mass Spectrometry (16)
Shotgun proteomics (8)
Mass spectrometry assay (3)
Data-dependent acquisition (3)
Bottom-up proteomics (3)
Mass spectrometry (2)
Mass spectrometry imaging (1)
DiaPASEF (1)
Gel-based experiment (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Orbitrap Fusion Lumos (2)
Liquid Chromatography MS - positive - reverse-phase (2)
Liquid Chromatography MS - negative - reverse-phase (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
LTQ Orbitrap Velos (1)
LTQ Orbitrap Elite (1)
Liquid Chromatography MS - negative - reversed-phase-c18 (1)
Liquid Chromatography MS - positive - reversed-phase-c18 (1)

Publication Date

2024 (16)
2016 (5)
2023 (5)
2025 (5)
2015 (4)
2026 (4)
2014 (3)
2022 (3)
2019 (2)
2013 (1)
2012 (1)
2010 (1)
2009 (1)
2021 (1)

CHEBI ID

CHEBI:37670 (1)

Metabolite Name

N-Acetylvaline (3)
Methyl (2S,4R,9R,10S,13R)-4,15-dihydroxy-17-methoxy-9-methyl-6-oxo-5,16-dioxapentacyclo[12.3.3.01,13.02,10.04,8]icos-7-ene-14-carboxylate (2)
(9S,10E,12Z,15Z)-9-Hydroperoxy-10,12,15-octadecatrienoic acid (2)
(2alpha,3alpha,5xi,9xi,18xi)-2,3,19-Trihydroxyurs-12-en-28-oic acid (2)
Baccatin (2)
2-(Ethoxymethyl)-1h-Imidazo[4,5-C]quinolin-4-Amine (2)
AB-PINACA (2)
1-stearoyl-sn-glycero-3-phosphoethanolamine (2)
Acetylenedicarboxylic acid (2)
Juniperic acid (2)
12-oxo Phytodienoic Acid (2)
(11E,15Z)-9,10,13-Trihydroxy-11,15-octadecadienoic acid (2)
Alpha-D-Glucopyranosyl 2-O-(2-methylbutanoyl)-alpha-D-glucopyranoside (2)
Benzyl 6-O-beta-D-glucopyranosyl-beta-D-glucopyranoside (2)
N2-Methylguanosine (2)
N-Acetyl-D-alloisoleucine (2)
Guanosine monophosphate (GMP) (2)
GUANOSINE (2)
APM (2)
Thymidine 5'-monophosphate (2)
N-Acetyl-L-methionine (2)
Clopenthixol decanoate (2)
3-hydroxydodecanoyl carnitine (2)
Prolylleucine (2)
4-Hydroxyphenylpyruvic acid (2)
2'-Deoxyuridine (2)
Enterolactone (2)
4-Pyridoxic acid (2)
15-OxoEDE (2)
(+/-)12(13)-DiHOME (2)

IsPrivate

False (12)

Submitter Keywords

Ersilia (12)
FAIR-AIML (12)
Machine Learning Model (12)

Modelling Approach

Machine learning (12)

Study type

Transcription profiling by array (6)
RNA-seq of coding RNA (6)
Genotyping by array (1)
ChIP-seq (1)

Release Date

2025 (378)
2024 (261)
2022 (233)
2023 (227)
2021 (164)
2020 (117)
2026 (67)
2018 (63)
2017 (42)
2019 (39)
2016 (38)
2015 (38)
2013 (22)
2012 (20)
2014 (18)
2011 (9)
2009 (6)
2010 (4)
2005 (3)
2007 (1)
2006 (1)
2004 (1)
2002 (1)

Lab affiliation

Newcastle University Biosciences Institute, Newcastle University, Newcastle upon Tyne, UK (1)
Analytical Research Center for Organic and Biological Molecules, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, China (1)
Department of Medical Biochemistry and Cell biology, University of Gothenburg, Sweden (1)
Group Director OMICS, Integrated Bioanalysis AstraZeneca R&D / Clinical Pharmacology & Safety Sciences 121 Oyster Point Blvd. South San Francisco, CA 94080, USA (1)
1State Key Laboratory of Digital Medical Engineering, Department of Otolaryngology Head and Neck Surgery, Zhongda Hospital, School of Life Sciences and Technology, School of Medicine, Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University, Nanjing 210096, China.2 Co-Innovation Center of Neuroregeneration, Nantong University, Nantong 226001, China. (1)
Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC 3010, Australia. Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, VIC 3010, Australia (1)
Laboratory Head and Chemical Biology Division Head, WEHI, Australia (1)
Mayo Proteomics Core (1)
Advanced Technology Walter & ELiza Hall Institute (1)
Ph.D. Program in Medical Biotechnology, College of Medical Science and Technology, Taipei Medical University, Taipei 11031, Taiwan (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Bavaria, Germany (1)
OmicVision Biosciences ApS (1)
The SATCM Key Laboratory for New Resources and Quality Evaluation of Chinese Medicines, Institute of Chinese Materia Medica, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, P.R. China (1)
Shanghai Institute for Materia Medica (1)
State Key Laboratory of Cellular Stress Biology, Innovation Center for Cell Signaling Network, School of Life Sciences, Xiamen University, Xiamen 361102, Fujian Province, P. R. China (1)
Department of Radiology Canary Center at Stanford for Cancer Early Detection Stanford School of Medicine Stanford University (1)

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Metabolic programming and functional remodeling by a c-di-GMP-centric hierarchy in aerobic granular sludge

This study systematically elucidates the hierarchical signaling regulatory network in aerobic granular sludge (AGS) by integrating dynamic analysis of quorum sensing signal molecules, microbial community structure profiling, and metabolomic characterization. The research reveals that c-di-GMP fun...

2025-12-10 | MTBLS13486 | MetaboLights

Factors that influence trust and willingness to use generative AI for health information: A cross-sectional study.

Not available

S-EPMC12304636 | biostudies-literature

A literature review of artificial intelligence (AI) for medical image segmentation: from AI and explainable AI to trustworthy AI.

Not available

S-EPMC11651983 | biostudies-literature

Dynamics of labor and capital in AI vs. non-AI industries: A two-industry model analysis.

Not available

S-EPMC10807838 | biostudies-literature

Generating conceptual landscape design via text-to-image generative AI model.

Not available

S-EPMC12424439 | biostudies-literature

TrialBench: Multi-Modal AI-Ready Datasets for Clinical Trial Prediction.

Not available

S-EPMC12475113 | biostudies-literature

Dipsacus asperoides C. Y. Cheng et T. M. Ai, LC-MSMS

Pentacyclic triterpenes are a class of natural products that are present in Dipsacus asperoides with a long history of use. Pharmacological studies have shown that pentacyclic triterpenes have various biological activities. We have performed proteomic analysis in multiple tissues of this species to ...

ORGANISM(S): Dipsacus asperoides

2023-02-09 | PXD038580 | Pride