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ProteomicsSuccinylation dimethyl-labeling quantitative proteomic in liver cancer HepG2 cells
Lysine succinylation (Ksucc) as an evolutionarily conserved and widespread post-translational modification has been identified. However, the mechanism of succinylation modulation remains unclear. Here, we report a histone acetyltransferase is a succinyltransferase, essentially enhancing the tumor gr...
ORGANISM(S): Homo sapiens (Human) 
2020-12-10 | PXD013781 | Pride
Proteomic Succinylation Lc-ms/ms 
TranscriptomicsRNA-seq data sets of human non small cell lung cancer line A549 treated with feiyanning against untreated controls, during co-culture with macrophages.
RNA-seq analysis was performed in co-cultured A549 cells with or without feiyanning. A549 cells and macrophages were incubated 48h together in serum-free medium for producing co-cultured A549 cells. Treated groups were supplemented with Chinese traditional medicine Feiyanning.
ORGANISM(S): Homo sapiens 
2023-12-31 | E-MTAB-12420 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiles of PA1 teratoma cells transfected by RIPK1, RIPK2, RIPK3, or RIPK4
RIPK4 but not the related kinases RIPK1, RIPK2, and RIPK3 caused similar transcriptional changes to Wnt3a. PA1 cells were transfected by 8ug RIPK1, RIPK2, RIPK3, or RIPK4 for 48h, RNA were extracted and sequenced.
ORGANISM(S): Homo sapiens 
2013-02-04 | E-GEOD-43362 | biostudies-arrayexpress
UnknownGenome-wide identification, evolutionary and expression analyses of LEA gene family in peanut (Arachis hypogaea L.).
Not available
S-EPMC8966313 | biostudies-literature
MetabolomicsAltered metabolome and microbiome features provide clues in understanding irritable bowel syndrome and depression comorbidity

Irritable bowel syndrome (IBS) is one of the functional gastrointestinal disorders characterized by chronic and/or recurrent symptoms of abdominal pain and irregular defecation. Changed gut microbiota has been proposed to mediate IBS; however, contradictory results exist, and IBS-specific microbi...

2021-12-01 | MTBLS2774 | MetaboLights
UnknownGenome-wide identification and evolutionary analysis of RLKs involved in the response to aluminium stress in peanut.
Not available
S-EPMC8215822 | biostudies-literature
TranscriptomicsTranscriptome sequencing of two macaques, crab-eating macaque and Indian rhesus macaque
Deep sequencing of mRNA from two macaques, crab-eating macaque and Indian rhesus macaque Analysis of ploy(A)+ RNA of different specimens:brain,ileum,kidney,liver,testes and white adipose for crab-eating macaque while brain,heart,,kidney,liver,quadriceps and testes for Indian rhesus macaque
ORGANISM(S): Macaca mulatta 
2011-10-13 | E-GEOD-29629 | biostudies-arrayexpress
TranscriptomicsRNA m5C Methylation in breast cancer using MeRIP-Seq
RNA m5C methylation profile of MCF10A and MDA486 by using MeRIP-Seq protocol Immunoprecipitation of Methylated mRNA at Cytosine (m5C) residues: Affinity purified of anti-methyl cytosine (m5C) polyclonal antibody 7ug (Zymo Research, Catalog#A3001-50) was conjugated with protein-A magnetic beads for 2...
ORGANISM(S): Homo sapiens 
2014-02-20 | E-GEOD-53370 | biostudies-arrayexpress
ProteomicsPinctada fucata martensii shell matrix protein LC-MSMS
Nacre, the iridescent material found in pearls and shells of molluscs, is formed through an extraordinary process of matrix-assisted biomineralization. Despite recent advances, many parts of the biomineralization process and its evolutionary origin remain a mystery. The pearl oyster Pinctada fucata ...
ORGANISM(S): Bivalvia 
2017-07-07 | PXD006786 | Pride
Lc-msms Shell matrix protein Pearl oyster 
UnknownA positive feedback loop between TAZ and miR-942-3p modulates proliferation, angiogenesis, epithelial-mesenchymal transition process, glycometabolism and ROS homeostasis in human bladder cancer.
Not available
S-EPMC7836562 | biostudies-literature
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