Huang Y Y - OmicsDI

Show results for

Unknown (71762)
Proteomics (1205)
Transcriptomics (343)
Genomics (266)
Metabolomics (102)
Models (5)
Other (1)
Multiomics (1)

Organisms

Homo sapiens (872)
Mus musculus (356)
Rattus norvegicus (36)
Arabidopsis thaliana (33)
Oryza sativa (28)
Saccharomyces cerevisiae (9)
Streptomyces coelicolor (8)
Drosophila melanogaster (8)
cellular organisms (4)
Bombyx mori (4)
Citrus sinensis (3)
Eukaryota (2)
Macaca mulatta (2)
Brassica napus (2)
Streptomyces coelicolor A3(2) (2)
Ovis aries (2)
Oryza sativa Japonica Group (2)
Plasmodium falciparum (2)
Xenopus laevis (1)
Spalax carmeli (1)
Coccinella septempunctata (1)
Candida tropicalis MYA-3404 (1)
Nannospalax galili (1)
Apis mellifera scutellata (1)
Fukomys damarensis (1)
Myotis brandtii (1)
Pseudomonas aeruginosa M18 (1)
Nannochloropsis oceanica (1)
Pteropus alecto (1)
Bos grunniens (1)

Organisms

Homo sapiens (6)
Mus musculus (2)
Listeria monocytogenes str. Scott A (1)

Repository

pride (777)
biostudies-arrayexpress (385)
iProX (353)
NODE (108)
EGA (106)
MetaboLights (100)
MassIVE (32)
PeptideAtlas (19)
PAXDB (18)
ENA (10)
BioModels (5)
geo (4)
jPOST (2)
PanoramaPublic (2)
GPMDB (1)

Tissue

Cell culture (196)
Epithelial cell (61)
Brain (42)
Liver (35)
Lung (26)
Whole body (26)
Blood plasma (24)
Leaf (23)
Permanent cell line cell (23)
Kidney (16)
Heart (15)
Hepatocyte (15)
Fibroblast (14)
Testis (14)
Blood cell (13)
Plant cell (13)
Blood (12)
Blood serum (12)
HeLa cell (12)
Spleen (12)
Bone marrow (11)
Root (11)
Stem cell (11)
B cell (10)
Embryonic stem cell (10)
Colon (9)
Skin (9)
Embryo (8)
Marrow (3)
Brain (2)

Disease

Disease free (21)
Breast cancer (15)
Colon cancer (13)
Acute leukemia (9)
Prostate adenocarcinoma (9)
Alzheimer's disease (6)
Cardiovascular system disease (5)
Cervix carcinoma (5)
Hepatocellular carcinoma (5)
Liver cancer (4)
Melanoma (4)
Non-small cell lung carcinoma (4)
Brain cancer (3)
COVID-19 (3)
Chronic lymphocytic leukemia (3)
Influenza (3)
Lung cancer (3)
Malignant neoplasm of ovary (3)
Non-alcoholic steatohepatitis (3)
Severe acute respiratory syndrome (3)
Type 2 diabetes mellitus (3)
Autism spectrum disorder (2)
Brain disease (2)
Carcinoma (2)
Cholangiocarcinoma (2)
Disease (2)
Kidney cancer (2)
Liver carcinoma (2)
Nodal peripheral T-cell Lymphoma (1)
Not Available (1)

Technology Type

Mass Spectrometry (777)
Shotgun proteomics (358)
Bottom-up proteomics (138)
Affinity purification coupled with mass spectrometry proteomics (89)
Mass spectrometry (82)
Data-dependent acquisition (76)
Gel-based experiment (50)
Data-independent acquisition (38)
Top-down proteomics (27)
SWATH MS (18)
All-ion fragmentation (12)
Chemical cross-linking coupled with mass spectrometry proteomics (12)
Mass spectrometry assay (11)
Affinity proteomics (11)
SRM/MRM (11)
Proteogenomics (10)
NMR spectroscopy (8)
DiaPASEF (5)
Immunopeptidomics (4)
Mass spectrometry imaging (3)
Illumina HiSeq 2000, ILLUMINA (2)
Aperio (1)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina HiSeq 2500 (ILLUMINA), AB SOLiD System (ABI_SOLID) (1)
Illumina HiSeq 2500 (ILLUMINA), Illumina HiSeq 4000 (ILLUMINA) (1)
Illumina OmniQuad 2.5 - CNVpartition (1)
NextSeq 550, ILLUMINA (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (31)
Liquid Chromatography MS - negative - reverse phase (27)
Q Exactive (9)
LTQ Orbitrap Velos (8)
Liquid Chromatography MS - positive - hilic (8)
LTQ Orbitrap Elite (7)
Liquid Chromatography MS - (6)
Liquid Chromatography MS - alternating - reverse phase (6)
Orbitrap Fusion Lumos (5)
Q Exactive Plus (5)
Bruker (5)
Liquid Chromatography MS - alternating - hilic (5)
Illumina HiSeq 2000 (4)
Illumina Genome Analyzer II (2)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
LTQ Orbitrap (2)
Orbitrap Eclipse (2)
Illumina Genome Analyzer IIx (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
Instrument (1)
LTQ (1)
Orbitrap Ascend (1)
Orbitrap Fusion (1)
Orbitrap Fusion ETD (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
SolariX (1)

Publication Date

2024 (222)
2025 (200)
2022 (192)
2023 (158)
2026 (142)
2021 (128)
2014 (117)
2020 (73)
2013 (69)
2012 (62)
2016 (52)
2019 (49)
2018 (48)
2015 (44)
2017 (37)
2011 (36)
2010 (30)
2005 (11)
2009 (11)
2008 (7)
2007 (5)
2006 (3)

UNIPROT ID/AC

143BA_DANRE (15)
143BB_DANRE (15)
143G1_DANRE (15)
7955.ENSDARP00000023429 (15)
7955.ENSDARP00000067603 (15)
O14543 (2)
O15524 (2)
O60674 (2)
P01112 (2)
P01579 (2)
P04049 (2)
P05231 (2)
P08887 (2)
P15260 (2)
P17676 (2)
P23458 (2)
P28482 (2)
P40189 (2)
P40763 (2)
P42224 (2)
P62136 (2)
P62993 (2)
P67775 (2)
Q02750 (2)
Q06124 (2)
Q07889 (2)
P12965 (1)
P26696 (1)
Q05116 (1)
Q90W58 (1)

ENSEMBL ID

ENSDARG00000000103 (17)
ENSDARG00000001431 (17)
ENSDARG00000001915 (17)
ENSDARG00000001950 (17)
ENSDARG00000001993 (17)
ENSDARG00000002480 (17)
ENSDARG00000005039 (17)
ENSDARG00000005560 (17)
ENSDARG00000005791 (17)
ENSDARG00000006399 (17)
ENSDARG00000007219 (17)
ENSDARG00000009285 (17)
ENSDARG00000009484 (17)
ENSDARG00000010149 (17)
ENSDARG00000013078 (17)
ENSDARG00000016301 (17)
ENSDARG00000016393 (17)
ENSDARG00000017014 (17)
ENSDARG00000017624 (17)
ENSDARG00000018404 (17)
ENSDARG00000021124 (17)
ENSDARG00000022767 (17)
ENSDARG00000023323 (17)
ENSDARG00000025012 (17)
ENSDARG00000025301 (17)
ENSDARG00000025350 (17)
ENSDARG00000025635 (17)
ENSDARG00000027355 (17)
ENSDARG00000029406 (17)
ENSDARG00000031164 (17)

CHEBI ID

CHEBI:17368 (33)
CHEBI:17895 (33)
CHEBI:15354 (31)
CHEBI:16708 (31)
CHEBI:30769 (31)
CHEBI:15756 (30)
CHEBI:16919 (29)
CHEBI:17154 (29)
CHEBI:17568 (29)
CHEBI:16704 (28)
CHEBI:16737 (28)
CHEBI:17295 (28)
CHEBI:17596 (28)
CHEBI:16335 (27)
CHEBI:15891 (26)
CHEBI:17203 (26)
CHEBI:16750 (25)
CHEBI:17750 (25)
CHEBI:16015 (24)
CHEBI:7916 (24)
CHEBI:15741 (23)
CHEBI:16040 (23)
CHEBI:17562 (23)
CHEBI:17748 (23)
CHEBI:15428 (22)
CHEBI:15971 (22)
CHEBI:16027 (22)
CHEBI:16414 (22)
CHEBI:16467 (22)
CHEBI:16828 (22)

Metabolite Name

Hypoxanthine (22)
Adenine (20)
Adenosine (20)
Guanosine (20)
L-Arginine (20)
L-Tyrosine (18)
Palmitic acid (18)
Uracil (18)
Uridine (18)
Cytosine (17)
L-Proline (17)
Creatine (16)
Creatinine (16)
Cytidine (16)
Guanine (16)
Linoleic acid (16)
Glycerophosphocholine (15)
Inosine (15)
L-Carnitine (15)
L-Histidine (15)
Ornithine (15)
Taurine (15)
Thymidine (15)
Choline (14)
Citric acid (14)
Dodecanoic acid (14)
L-Glutamine (14)
Pantothenic acid (14)
Thymine (14)
4-Pyridoxic acid (13)

First Public Date

2022 (3)
2014 (2)
2026 (1)
2024 (1)
2023 (1)
2019 (1)
2015 (1)

Modelling Approach

Ordinary differential equation model (5)

Lab affiliation

Chinese Academy of Sciences Shanghai Institute of Materia Medica (6)
Institutes of Biomedical Sciences and department of Chemistry, Fudan University, Shanghai, China (6)
State Key Laboratory of Genetic Engineering, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai 200438, China (5)
Department of Chemistry, Imperial College London, Molecular Sciences Research Hub, London, W12 0BZ, UK The Francis Crick Institute, London, NW1 1AT, UK (4)
Guangzhou Medical University (4)
Huazhong Agricultural University (4)
Tsinghua University, China (4)
Zhejiang University (4)
Children's Hospital of Nanjing Medical University (3)
Department of Medicine, Columbia University Irving Medical Center (3)
Department of pathophysiology, School of Basic Medical Sciences, Wuhan University, Wuhan 430071, China (3)
Jinan University (3)
Key Laboratory of Tropical Marine Bio-resources and Ecology,South China Sea Institute of Oceanology, Chinese Academy of Sciences (3)
National Center for Advancing Translational Sciences, National Institutes of Health (3)
Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, Collaborative Innovation Center of Hematology, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200000, China (3)
Sichuan University (3)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China. (3)
State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Sun Yat-sen University Cancer Center, Guangzhou 510060, China (3)
The First Affiliated Hospital, School of Medicine, Zhejiang University (3)
The University of Chicago (3)
Zhejiang Academy of Agricultural Sciences (3)
Aarhus University, Denmark (2)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (2)
BCMP, Harvard Medical School, Boston, USA Cancer Biology, Dana-Farber Cancer Institute, Boston, USA (2)
Beijing Key Laboratory of Protein Posttranslational Modifications and Cell Function, Department of Biochemistry and Biophysics, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China. (2)
Brain Injury Center, Renji Hospital, School of Medicine, Shanghai Jiao Tong University; Shanghai Institute of Head Trauma, Shanghai, China, 200127. (2)
CAS Center for Excellence in Molecular Plant Sciences (2)
Cambridge Institute for Medical Research, University of Cambridge, Cambridge Biomedical Campus, CB2 0XY, UK (2)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada. (2)
Center for Biomedical Mass Spectrometry, Department of Biochemistry, Boston University School of Medicine (2)