Huber H H - OmicsDI

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Transcriptomics (283)
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Mass Spectrometry (155)
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Instrument Platform

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UNIPROT ID/AC

P08574 (1)
O14727 (1)
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Q9NR28 (1)
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CHEBI ID

CHEBI:17822 (4)
CHEBI:16856 (4)
CHEBI:48928 (4)
CHEBI:15428 (4)
CHEBI:15741 (4)
CHEBI:37024 (4)
CHEBI:18300 (4)
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CHEBI:17050 (3)
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CHEBI:26986 (3)
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CHEBI:28300 (3)

Metabolite Name

Glycine (3)
Fumarate (3)
AMP (3)
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L-Threonine (3)
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Palmitoyl ethanolamide (2)
Maltotriose (2)
4-vinylphenol sulfate (2)
3-aminoisobutyrate (2)
2-hydroxydecanoate (2)
Quinate (2)
Trimethylamine N-oxide (2)
Trans-urocanate (2)
Threonate (2)
Tauroursodeoxycholate (2)
Taurodeoxycholate (2)
Taurocholate (2)

First Public Date

2014 (4)
2024 (2)
2025 (1)
2020 (1)
2019 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

University Hospital Cologne (8)
Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Office B25A/04/94 Rue du Bugnon 25a, CH-1005 Lausanne (6)
Cellzome, a GSK company (5)
Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, SE-751 23 Uppsala, Sweden. (4)
Aarhus University Department of Biomedicine DK-8000 Aarhus C (4)
1) Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland 2) Faculty of Science, University of Zurich, Zurich, Switzerland (4)
Division of Cell Matrix Biology & Regenerative Medicine (L5) / Division of Cell Matrix Biology & Regenerative Medicine, University of Manchester (3)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (3)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (3)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchâtel, Switzerland (part of Philip Morris International group of companies) (2)
University of Bayreuth, Universitätsstrasse 30, 95447 Bayreuth, Germany (2)
Philip Morris R&D, Neuchatel, Switzerland (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 NeuchÃƒÂ¢tel, Switzerland (part of Philip Morris International group of companies) (2)
Cellzome (2)
Department of Biosciences, University of Salzburg (2)
Technical University of Munich (TUM), TUM School of Natural Sciences, Department Bioscience, Chair of Organic Chemistry II, Center for Functional Protein Assemblies (CPA), Ernst-Otto-Fischer Str. 8, Garching 85748, Germany (1)
Jesper V. Olsen, Novo Nordisk Foundation Center for Protein Research, Faculty of Health & Medical Sciences, University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen, Denmark. (1)
Aalto University, Espoo, Finland (1)
Systems Arbovirology - Leibniz Institute for Experimental Virology (1)
Max-Planck-Institute for Biology (1)
Aarhus University Department of Biomedicine DK-8000 Aarhus C (lab head) (1)
Center of experimental therapeutics Department of oncology UNIL CHUV Ludwig Institute for Cancer Research Lausanne Centre de recherche Agora Rue du Bugnon 25A CH-1005 Lausanne (1)
Centre for Medicines Discovery, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford, UK. Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford, UK. (1)
Molecular Systems Biology Department of Ecogenomics and Systems Biology University of Vienna Austria (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, the Netherlands (1)
Chief Scientific Officer, Pelago Bioscience AB (1)
1.Department of Medical Oncology, Inselspital, Bern University Hospital, University of Bern, 3010 Bern, Switzerland. 2.Department for BioMedical Research, University of Bern, 3008 Bern, Switzerland. 3. Conway Institute for Biomolecular and Biomedical Research, University College Dublin, Dublin D04 V1W8, Ireland. (1)
Neuron Glia Biology in Health and Disease Group, iMed.Ulisboa, Faculty of pharmacy, University of Lisbon, Lisbon, Portugal (1)
Institute of Biochemistry and Molecular Immunology RWTH Aachen University Germany (1)
Department of Molecular Systems Biology, Helmholtz Centre for Environmental Research – UFZ, Permoserstraße 15, 04318 Leipzig, Germany (1)

IsPrivate

False (2)

Modification

+3amu) (1)

Study type

Transcription profiling by array (173)
RNA-seq of coding RNA (60)
Unknown experiment type (8)
Animal - One-color microarray (8)
Comparative genomic hybridization by array (5)
ChIP-seq (5)
RNA-seq of non coding RNA (5)
Transcription profiling by tiling array (4)
ChIP-chip by array (3)
DNA-seq (3)
RNA-seq of coding RNA from single cells (3)
Animal - High-throughput sequencing (2)
Other (2)
Plant - One-color microarray (1)
High-throughput sequencing (1)
Human - One-color microarray (1)
RNAi profiling by array (1)
MicroRNA profiling by high throughput sequencing (1)
Hi-C (1)
RNA-seq of total RNA (1)

Release Date

2024 (156)
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2000 (6)
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2002 (3)
2001 (3)
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HybridPoplar_H11-11_Leaves_MalacosomaDisstria_Herbivory

From a set of 15 standard, normalized or full-length cDNA libraries, we generated 139 007 3'- or 5'-end sequenced ESTs, representing more than one-third of the c. 385 000 publicly available Populus ESTs. Clustering and assembly of 107 519 3'-end ESTs resulted in 14 451 contigs and 20 560 singletons,...

ORGANISM(S): Populus trichocarpa x Populus deltoides

2008-04-22 | E-GEOD-9522 | biostudies-arrayexpress

Transcription profiling of jejunum from chickens with either a high or low natural antibody response which were fed an organic or conventially produced diet

ISA Brown Warren medium heavy layer hens were divergently selected for 25 generations on their primary immune response. Two selection chicken lines were established: chickens with a high natural antibody response (H) and chicken with a low natural antibody response (L). Besides a control line of ran...

ORGANISM(S): Gallus gallus

2010-03-02 | E-MEXP-1798 | biostudies-arrayexpress

Robust Huber-LASSO for improved prediction of protein, metabolite and gene expression levels relying on individual genotype data.

Not available

S-EPMC8293825 | biostudies-literature

Micro-RNAs in Adult Rat Liver are Refractory to 19 Hours Dioxin Exposure

Dioxin-like chemicals are well-known for their ability to upregulate expression of numerous genes via the AH receptor (AHR). However, recent transcriptomic analyses in several laboratories indicate that dioxin-like chemicals or AHR genotype itself also can downregulate levels of mRNAs encoded by nu...

ORGANISM(S): Rattus norvegicus

2007-08-15 | E-GEOD-8467 | biostudies-arrayexpress

Dual-targeting 5-nitroimidazole ethers eradicate H. pylori by induction of stress and disabling its adaptive response

Metronidazole represents a front line-drug against Helicobacter pylori. To unravel its largely unknown cellular targets, we performed activity-based protein profiling (ABPP). Surprisingly, an alkynylated ether probe (Metro-P3) exhibited a 60-fold enhanced potency. Chaperonin HpGroEL and thiol peroxi...

ORGANISM(S): Staphylococcus schleiferi Staphylococcus pseudintermedius

2026-04-13 | PXD067473 | Pride