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MetabolomicsLinking bacterial metabolites to disease-associated microbes to uncover mechanisms of host-microbial interactions in intestinal inflammation. Veillonella parvula media profiling of IBD drug metabolites
Not available
ORGANISM(S): Veillonella parvula 
ST002473 | MetabolomicsWorkbench
TranscriptomicsPredicting response to vedolizumab therapy using mucosal transcriptomics in IBD patients
In this study we wanted to identify baseline predictors of successful vedolizumab therapy in patients with inflammatory bowel disease.
ORGANISM(S): Homo sapiens 
2019-08-23 | E-MTAB-7845 | biostudies-arrayexpress
UnknownValidation of the IBD-Control Questionnaire across different sociodemographic and clinical subgroups: secondary analysis of a nationwide electronic survey.
Not available
S-EPMC10896631 | biostudies-literature
TranscriptomicsTranscription profiling of human ileum and colonic tissues from patients with Crohns disease or ulcerative colitis
Samples for microarray analysis were derived from terminal ileum and colonic tissues from probands with Crohn's disease and Ulcerative Colitis and control patients, respectively. IBD tissue biopsies from non-inflamed regions 10 cm distant from pathological areas were selected. To minimize inter-indi...
ORGANISM(S): Homo sapiens 
2007-08-03 | E-GEOD-1152 | biostudies-arrayexpress
TranscriptomicsGene expression profiling in IBD rat treat with MSC transplantation
Investigation of whole genome gene expression level changes in Inflammatory bowel disease rats after MSC transplantation, compared to IBD control rats, and to explore the mechanism of MSC transplantation. A four chip study using total RNA recovered from two separate IBD rats after MSC transplantatio...
ORGANISM(S): Rattus norvegicus 
2015-05-08 | E-GEOD-68653 | biostudies-arrayexpress
TranscriptomicsColon gene expression signatures in mice mono-associated with IBD-associated micro-organisms
Studying host-microbiota interactions is fundamental to understand mechanisms involved in intestinal inflammation and inflammatory bowel diseases. In this work, we studied these interactions in mice mono-associated with 4 bacteria and 2 yeasts, all representative of intestinal microbiota and/or asso...
ORGANISM(S): Mus musculus 
2015-08-22 | E-GEOD-63299 | biostudies-arrayexpress
GenomicsIBD virome
IBD virome Raw sequence reads
PRJNA552463 | ENA
ProteomicsLow mass blood peptides discriminative of IBD severity
The enriched low mass proteome is unexplored as a source of differentiators for diagnosing and monitoring Inflammatory Bowel Disease (IBD) activity, less invasively than colonoscopy and histopathology. Differences in the enriched low mass plasma proteome (<25kDa) were assessed by label-free quantita...
ORGANISM(S): Homo sapiens (Human) 
2015-11-06 | PXD002821 | Pride
Biomarker Ibd Mrm Spp24 Proteomic Guc2a 
UnknownImmune-Mediated Inflammatory Diseases Awareness and Management among Physicians Treating Patients with Inflammatory Bowel Disease: An IG-IBD Survey.
Not available
S-EPMC11012957 | biostudies-literature
Genomics16S IBD dataset
16S IBD dataset Raw sequence reads
PRJNA552448 | ENA
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