Ibrahim N N - OmicsDI

Show results for

Unknown (2135)
Transcriptomics (47)
Proteomics (36)
Genomics (9)
Metabolomics (9)
Models (4)

Organisms

Homo sapiens (56)
Mus musculus (22)
Saccharomyces cerevisiae (3)
Drosophila melanogaster (2)
Rattus norvegicus (2)
Anopheles funestus (1)
Enterococcus faecalis (1)
Gallus gallus (1)
Clusia major (1)
Clusia minor (1)
Clusia rosea (1)
Naja haje (1)
Naja katiensis (1)
Naja nigricollis (1)

Repository

biostudies-arrayexpress (52)
pride (30)
MetaboLights (8)
EGA (5)
BioModels (4)
MassIVE (4)
GNPS (1)
PanoramaPublic (1)

Tissue

Epithelial cell (6)
Cell culture (5)
Brain (3)
Permanent cell line cell (2)
Stem cell (2)
Abdominal adipose tissue (1)
B cell (1)
Breast cancer cell (1)
Cell suspension culture (1)
Early embryonic cell (1)
Epithelial cell of lung (1)
Erythrocyte (1)
HEK-293 cell (1)
Leaf (1)
Liver (1)
Malignant cell (1)
Ovary cancer cell (1)
Pancreas (1)
Primary cell (1)
Prostate gland (1)
Seminal plasma (1)
Skeletal muscle (1)
Small cell lung cancer cell (1)
Subcutaneous adipose tissue (1)
Testis (1)

Disease

Breast cancer (3)
Disease free (3)
Lung cancer (2)
Familial dysautonomia (1)
Oral submucous fibrosis (1)
Alzheimer's disease (1)
Brain cancer (1)
Brain glioblastoma multiforme (1)
Colorectal carcinoma (1)
Diffuse midline glioma (1)
Female reproductive organ cancer (1)
Gastric adenocarcinoma (1)
Glioblastoma (1)
Male infertility (1)
Prostate adenocarcinoma (1)
Squamous cell carcinoma (1)
Type 1 diabetes mellitus (1)

Technology Type

Mass Spectrometry (30)
Shotgun proteomics (15)
Affinity purification coupled with mass spectrometry proteomics (7)
Bottom-up proteomics (7)
Mass spectrometry (5)
Data-dependent acquisition (4)
NMR spectroscopy (3)
Gel-based experiment (3)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Immunopeptidomics (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Illumina HiSeq 2500 (2)
Illumina HiSeq 4000 (2)
Bruker (2)
Illumina MiSeq (1)
Ion Torrent S5 XL (1)
6560 Q-TOF LC/MS (1)
In-house built IMS-MS with Agilent 6538 QTOF MS (1)
Orbitrap Exploris 480 (1)
Q Exactive (1)
Q-Exactive Plus with 11-meter SLIM (1)
RapidFire 365 coupled with Agilent 6560 Ion Mobility QTOF (1)
SLIM TWIMS-MS coupled with Agilent 6224 TOF (1)
5975C Series GC/MSD (Agilent) (1)
Agilent SPE-IMS-MS (1)
Liquid Chromatography MS - alternating - hilic (1)
Nuclear Magnetic Resonance (NMR) - (1)
Thermo Electron FOCUS GC (1)
Xevo G2 QTOF (Waters) (1)

Publication Date

2013 (13)
2011 (12)
2024 (10)
2023 (10)
2025 (8)
2022 (6)
2012 (6)
2021 (4)
2014 (4)
2018 (4)
2017 (4)
2015 (3)
2010 (3)
2020 (3)
2026 (3)
2016 (2)
2009 (2)
2008 (1)
2019 (1)

UNIPROT ID/AC

Q12834 (2)
Q13257 (2)
Q9Y6D9 (2)
O43684 (1)
O60566 (1)
P38987 (1)
P47113 (1)

CHEBI ID

CHEBI:27266 (4)
CHEBI:24898 (3)
CHEBI:25017 (3)
CHEBI:32816 (3)
CHEBI:15318 (2)
CHEBI:15428 (2)
CHEBI:16335 (2)
CHEBI:16449 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16797 (2)
CHEBI:16811 (2)
CHEBI:16958 (2)
CHEBI:17154 (2)
CHEBI:17368 (2)
CHEBI:17596 (2)
CHEBI:17750 (2)
CHEBI:18237 (2)
CHEBI:26271 (2)
CHEBI:26806 (2)
CHEBI:27897 (2)
CHEBI:28044 (2)
CHEBI:28300 (2)
CHEBI:30769 (2)
CHEBI:78320 (2)
CHEBI:7916 (2)
CHEBI:15996 (1)
CHEBI:17552 (1)
CHEBI:10072 (1)
CHEBI:1148 (1)

Metabolite Name

Valine (3)
Xanthine (3)
2-Hydroxybutyric acid (2)
AMP (2)
Adenine (2)
Adenosine (2)
CMP (2)
GMP (2)
Glucose 6-phosphate (2)
Glucuronic acid (2)
Inosine (2)
Isoleucine (2)
Isoleucine (2)
Leucine (2)
Leucine (2)
Methionine (2)
N-Acetylglutamic acid (2)
Pantothenic acid (2)
Phenylalanine (2)
Proline (2)
Pyridoxine (2)
Taurocholic acid (2)
Tryptophan (2)
UMP (2)
1-Methylnicotinamide (1)
1-methyladenosine (1)
1-methylnicotinamide (1)
1.33 (1)
2,3-BPG (1)
2,3-Dihydroxybenzoic acid (1)

IsPrivate

False (4)

Submitter Keywords

FROG (1)

Modelling Approach

Ordinary differential equation model (3)
Constraint-based model (1)

Modification

4x(2)H labeled dimethylated residue (1)

Study type

Transcription profiling by array (32)
RNA-seq of coding RNA (10)
ChIP-seq (2)
DNA-seq (2)
Unknown experiment type (1)
CLIP-Seq (1)
Antigen profiling (1)
Transcription profiling by RT-PCR (1)
Comparative genomic hybridization by array (1)
Other (1)

Release Date

2025 (321)
2022 (312)
2023 (304)
2024 (257)
2021 (242)
2020 (136)
2019 (104)
2018 (81)
2016 (65)
2017 (60)
2026 (57)
2015 (52)
2014 (43)
2013 (39)
2012 (31)
2010 (27)
2011 (26)
2009 (14)
2008 (7)
2007 (6)
2006 (2)
2004 (1)

Lab affiliation

Vividion Therapeutics (4)
Molecular Neuroscience Research Center, Shiga University of Medical Science, Japan (2)
University of Dundee (2)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands. (1)
Calico Life Sciences (1)
Center for Molecular Imaging, Departments of Radiology and Surgery, The University of Michigan, BSRB A502, Ann Arbor, MI 48109, United States. (1)
Chair of Proteomics and Bioanalytics, TU Muenchen (1)
Chemical & Biomolecular Engineering, Johns Hopkins University (1)
Department of Biochemistry/ Venom, Antivenom and Natural Toxins Research Center, Ahmadu Bello University, Zaria (1)
Department of Cell Biology and Physiology, Washington University in St Louis, St Louis, Missouri, USA; Department of Otolaryngology/Head and Neck Surgery, Washington University School of Medicine, St Louis, Missouri, USA. (1)
EDyP (1)
Harvard T.H. Chan School of Public Health Harvard Medical School (1)
Harvard University MCB Department (1)
Henriette A. Remmer, Ph.D. Director, Proteomics & Peptide Synthesis Core University of Michigan C570C MSRB II SPC 5674 1150 W. Medical Center Drive Ann Arbor, MI 48109 https://brcf.medicine.umich.edu/cores/proteomics-peptide-synthesis/ (1)
Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, France (1)
Mass Spectrometry-based Proteomics Dept of Chemistry–BMC, Analytical Chemistry Box 599 751 23 Uppsala (1)
Molecular Systems Biology (MoSys), Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria (1)
Professor of Molecular Biology, University of Dundee (1)
Professor, Human Biology, Fred Hutchinson Cancer Center, USA (1)
Scientific Director Biomedical Mass Spectrometry Center University of Pittsburgh (1)
Segal Cancer Proteomics Centre (1)
The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK (1)
The Francis Crick Institute, London, UK Department of Neuromuscular Diseases, University College Londodn, UK National Hospital for Neurology and Neurosurgery, UCL NHS Foundation Trust, Londodn, UK (1)
Tomoko Takano, Dr. Professor - Department of Medicine, Division of Experimental Medicine, McGill University, MOntreal, QC, Canada (1)
University of Leicester (1)

Previous page
1 / 224
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 224
Next page

Sort by:

Relevance

Page size

(±)-1,2-Bis(N'-benzoyl-thio-ureido)cyclo-hexa-ne.

Not available

S-EPMC3089146 | biostudies-literature

Ibrahim2008_MCC_assembly_model_KDM

BioSystems (2007), doi:10.1016/j.biosystems.2008.06.007 In-silico study of kinetochore control, amplification, and inhibition effects in MCC assembly Bashar Ibrahim, Eberhard Schmitt, Peter Dittrich, Stephan Diekmann This is the kine...

2024-09-02 | BIOMD0000000193 | BioModels

N-(4-Meth-oxy-phen-yl)benzene-sulfonamide.

Not available

S-EPMC3051711 | biostudies-literature

Ibrahim2008_Cdc20_Sequestring_Template_Model

Biophysical Chemistry 134 (2008) 93-100 Mad2 binding is not sufficient for complete Cdc20 sequestering in mitotic transition control (an in silico study) Bashar Ibrahim, Peter Dittrich, Stephan Diekmann, Eberhard Schmitt This mode...

2024-09-02 | BIOMD0000000194 | BioModels

1H-NMR metabolomics identifies hypoxanthine as a novel metastasis-associated metabolite

Breast cancer is one of the leading causes of death in females, mainly because of metastasis. Oncometabolites, produced via metabolic reprogramming, can influence metastatic signaling cascades. Accordingly, and based on our previous results, we hypothesized that metabolites from highly metastatic br...

2025-09-19 | MTBLS7764 | MetaboLights

N'-(Cyclo-hexyl-carbon-yl)isonicotino-hydrazide.

Not available

S-EPMC2977321 | biostudies-literature

Nitrogen-Deficiency Stress Induces Protein Expression Differentially in Low-N Tolerant and Low-N Sensitive Maize Genotypes.

Not available

S-EPMC4800187 | biostudies-literature

N,N'-Bis(3β-acet-oxy-5α-cholest-6-yl-idene)hydrazine.

Not available

S-EPMC3051532 | biostudies-literature

(E)-N'-(2,4,5-Trifluorobenzyl-idene)isonicotinohydrazide monohydrate.

Not available