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MetabolomicsIntegrated genomic and metabolomic profiling of ISC1, an emerging Leishmania donovani population in the Indian subcontinent

Leishmania donovani is the responsible agent for visceral leishmaniasis (VL) in the Indian subcontinent (ISC). The disease is lethal without treatment and causes 0.2 to 0.4 million cases each year. Recently, reports of VL in Nepalese hilly districts have increased as well as VL cases cau...

2022-09-15 | MTBLS1606 | MetaboLights
MetabolomicsThe unique composition of Indian gut microbiome, gene catalogue and associated faecal metabolome deciphered using multi-omics approaches
BACKGROUND: Metagenomic studies carried out in the past decade have led to an enhanced understanding of the gut microbiome in human health, however, the Indian gut microbiome is not well explored yet. We analysed the gut microbiome of 110 healthy individuals from two distinct locations (North-Centra...
2019-01-04 | MTBLS803 | MetaboLights
TranscriptomicsGene expression profiling of conditional ablation of Indian hedgehog in the mouse uterus
Conditional ablation of Indian hedgehog (Ihh) in the murine uterus results in mice that are sterile due to defects in embryo implantation. We performed microarray analysis on these mice at the time point at which the Ihh target genes are induced by the administration of exogenous hormone to mimic d...
ORGANISM(S): Mus musculus 
2010-03-06 | E-GEOD-19517 | biostudies-arrayexpress
ProteomicsMeta-Analysis and DIA-MS-based Proteomic Investigation of COPD Patients and Asymptomatic Smokers in the Indian population
Chronic obstructive pulmonary disease (COPD) is India's second largest cause of death and is largely caused by smoking. Asymptomatic smokers develop COPD due to genetic, environmental, and molecular variables, making early screening crucial. Data-independent acquisition mass spectrometry (DIA-MS) pr...
ORGANISM(S): Homo sapiens (Human) 
2024-11-13 | PXD055242 | Pride
Smokers Healthy subjects Proteomics Dia Indian population : copd Asymptomatic smokers 
TranscriptomicsmiRNA expression studies in uveal melanoma (South Asian-Indian population).
To predict differentially expressed miRNAs between monosomy 3 and disomy 3, and to associate these miRNAs with the clinico-pathological parameters in South Asian Indian population with uveal melanoma (UM). The study consists of six uveal melanoma primary tumour tissues of South Asian-Indian populati...
ORGANISM(S): Homo sapiens 
2015-05-14 | E-GEOD-68828 | biostudies-arrayexpress
TranscriptomicsShared and unique components of human population structure and genome-wide signals of positive selection in South Asia
To study the population genetic structure and genome-wide signals of positive selection we carried out Illumina genotyping for 142 individuals of Sout Asian origin 142 samples are analysed on thwo different Illumina platforms. 48 of them with Human610-Quad v 1.0 are described herein. 142 samples ar...
ORGANISM(S): Homo sapiens 
2011-12-12 | E-GEOD-33489 | biostudies-arrayexpress
GenomicsOmics of an Indian population
Omics of an Indian population
PRJEB42528 | ENA
TranscriptomicsDNA methylation profiling reveals the presence of population-specific signatures correlating with phenotypic characteristics
DNA methylation of 10 samples each of Indo-European Dravidian ethnicity living in India has been assayed using Infinium HumanMethylation450 BeadChip. The data was used for assessing the epigentic affinity of Indian population with other global population.
ORGANISM(S): Homo sapiens 
2016-09-29 | E-MTAB-4770 | biostudies-arrayexpress
TranscriptomicsTranscriptome sequencing of two macaques, crab-eating macaque and Indian rhesus macaque
Deep sequencing of mRNA from two macaques, crab-eating macaque and Indian rhesus macaque Analysis of ploy(A)+ RNA of different specimens:brain,ileum,kidney,liver,testes and white adipose for crab-eating macaque while brain,heart,,kidney,liver,quadriceps and testes for Indian rhesus macaque
ORGANISM(S): Macaca mulatta 
2011-10-13 | E-GEOD-29629 | biostudies-arrayexpress
GenomicsCeliac disease case-control North Indian Immunochip dataset
Illumina Immunochip genotype data for coeliac disease and control samples of North Indian samples origin. Data is in PLINK binary format. Calling algorithm for genotypes is based on GenomeStudio (GenTrain), with manual clustering of selected variants.
EGAS00001000849 | EGA
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