Induced systemic resistance

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Unknown (1757)
Transcriptomics (991)
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Organisms

Homo sapiens (263)
Mus musculus (230)
Arabidopsis thaliana (75)
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Gallus gallus (5)
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Bombyx mori (3)

Organisms

Mus musculus (98)
Homo sapiens (25)
Arabidopsis thaliana (18)
Solanum lycopersicum (8)
Rattus norvegicus (8)
Solanum dulcamara (3)
Caenorhabditis elegans (3)
Zea mays (3)
mouse gut metagenome (3)
Nicotiana benthamiana (3)
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Vreelandella sp. RoRo2 (1)
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Serratia marcescens (1)
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Fragaria x ananassa (1)
Arachis hypogaea (1)
Oryza sativa (1)
Sus scrofa (1)
human gut metagenome (1)
Oryza sativa Japonica Group (1)
root metagenome (1)

Repository

biostudies-arrayexpress (852)
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geo (162)
pride (28)
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Tissue

Cell culture (4)
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Blumeria graminis f.sp. Hordei inoculated (1)
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IRAK-4 Q293X mutation (1)
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Eimeria maxima infected (1)
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S enteritidis (1)
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Rheumatoid arthritis (1)

Technology Type

Mass Spectrometry (28)
Shotgun proteomics (21)
Mass spectrometry (12)
Mass spectrometry assay (3)
Bottom-up proteomics (3)
Data-dependent acquisition (3)
NMR spectroscopy (2)
Top-down proteomics (2)
Data-independent acquisition (1)
Gel-based experiment (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 4000 (11)
Axon GenePix 4000B scanning hardware (7)
NextSeq 500 (6)
Agilent 2100 Bioanalyzer (5)
ScanArray Lite [PerkinElmer] (5)
Axon- GenePix4000B (5)
Scanning hardware (5)
Illumina HiSeq 2500 (5)
Axon GenePix 4000A scanning hardware (4)
GenePix 4000A [Axon Instruments] (4)
GenePix 4000B [Axon Instruments] (4)
Illumina NovaSeq 6000 (4)
418 [Affymetrix] (3)
ScanArray Express HT [PerkinElmer] (3)
Ribo-Zero Gold (Illumina) (2)
TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Gold (Illumina) (2)
ScanArray 4000 [PerkinElmer] (2)
ScanArray [PerkinElmer] (2)
BAS-5000 [FUJIFILM] (2)
DNA Microarray Scanner BA [Agilent Technologies] (2)
ScanArray 4000XL [PerkinElmer] (2)
NextSeq 2000 (2)
Cell Ranger (1)
Computational analysis using R (Seurat v5.0.0) (1)
(Make:PerkinElmer,Model:ScanArray 4000XL) (1)
Not applicable (1)
FUJIFILM BAS-5000 scanning hardware (1)
2100 Bioanalyzer (Agilent, CA, USA), Qubit 2.0 (Invitrogen, Germany) (1)
Affymetrix GeneChip Scanner 3000 7G (1)
ScanArray scanning hardware (1)

Publication Date

2010 (182)
2011 (109)
2008 (94)
2012 (87)
2013 (63)
2009 (58)
2015 (56)
2007 (45)
2014 (44)
2026 (42)
2022 (32)
2016 (30)
2025 (27)
2024 (26)
2019 (26)
2005 (25)
2021 (24)
2006 (24)
2004 (20)
2018 (19)
2023 (16)
2017 (16)
2020 (15)
2003 (1)

UNIPROT ID/AC

1FEH1_WHEAT (1)
4565.EPlTAEP00000010002 (1)
4565.EPlTAEP00000010027 (1)
4565.EPlTAEP00000010105 (1)
4565.EPlTAEP00000010109 (1)
4565.EPlTAEP00000010115 (1)
4565.Traes_1AL_00485097A.2 (1)
4565.Traes_1AL_00744EBC6.2 (1)
4565.Traes_1AL_0121566F8.1 (1)
4565.Traes_1AL_013C8AF6B1.1 (1)
4565.Traes_1AL_014F29DA6.1 (1)
4565.Traes_1AL_015BAE72C.1 (1)
4565.Traes_1AL_01806281A.1 (1)
4565.Traes_1AL_0226AAD07.1 (1)
4565.Traes_1AL_034B63223.1 (1)
4565.Traes_1AL_036E330F0.1 (1)
4565.Traes_1AL_03D275069.1 (1)
4565.Traes_1AL_0458C8353.1 (1)
4565.Traes_1AL_04A4521BB.2 (1)
4565.Traes_1AL_04EA15F57.1 (1)
4565.Traes_1AL_051FE2815.1 (1)
4565.Traes_1AL_087978D78.1 (1)
4565.Traes_1AL_08A2F5FA4.1 (1)
4565.Traes_1AL_08A7811E1.3 (1)
4565.Traes_1AL_0912DED70.1 (1)
4565.Traes_1AL_093513BF1.1 (1)
4565.Traes_1AL_09486AD47.1 (1)
4565.Traes_1AL_0A1043127.1 (1)
4565.Traes_1AL_0A5A0E0D3.1 (1)
4565.Traes_1AL_0A7711D82.1 (1)

CHEBI ID

CHEBI:15356 (5)
CHEBI:28300 (5)
CHEBI:17562 (5)
CHEBI:28044 (5)
CHEBI:28790 (5)
CHEBI:16449 (5)
CHEBI:16737 (5)
CHEBI:15354 (5)
CHEBI:17368 (5)
CHEBI:73027 (4)
CHEBI:28733 (4)
CHEBI:40521 (4)
CHEBI:28238 (4)
CHEBI:16113 (4)
CHEBI:15927 (4)
CHEBI:48430 (4)
CHEBI:26271 (4)
CHEBI:18132 (4)
CHEBI:49033 (4)
CHEBI:22660 (4)
CHEBI:22653 (4)
CHEBI:27570 (4)
CHEBI:18186 (4)
CHEBI:16811 (4)
CHEBI:17234 (4)
CHEBI:43580 (4)
CHEBI:16708 (4)
CHEBI:17724 (4)
CHEBI:16668 (4)
CHEBI:16750 (4)

Metabolite Name

AMP (4)
CMP (4)
Prolylhydroxyproline (3)
5'- GMP (3)
Dihomolinoleate (20:2n6) (3)
3-amino-2-piperidone (3)
3-formylindole (3)
3-hydroxyoleoylcarnitine (3)
3-hydroxypalmitoylcarnitine (3)
Oleoylcholine (3)
Palmitoylcholine (3)
2-hydroxybutyrate/2-hydroxyisobutyrate (3)
1-stearoyl-2-docosahexaenoyl-GPC (18:0/22:6) (3)
1-palmitoyl-2-docosahexaenoyl-GPC (16:0/22:6) (3)
N-acetylglucosamine/N-acetylgalactosamine (3)
Fructosyllysine (3)
5-(galactosylhydroxy)-L-lysine (3)
4-cholesten-3-one (3)
Methylphosphate (3)
1-oleoyl-GPI (18:1) (3)
1-methyl-4-imidazoleacetate (3)
N-acetylglucosaminylasparagine (3)
(R)-3-hydroxybutyrylcarnitine (3)
Tartarate (3)
Palmitoyl ethanolamide (3)
Arabonate/xylonate (3)
Arabitol/xylitol (3)
4-vinylphenol sulfate (3)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (3)
Acetylphosphate (3)

First Public Date

2026 (55)
2024 (37)
2025 (30)
2019 (23)
2014 (23)
2023 (22)
2022 (20)
2021 (16)
2020 (14)
2018 (7)
2017 (7)
2015 (7)
2016 (5)

Classification

bacteria (1)

Study status

Not provided (1)

Study type

Transcription profiling by array (721)
RNA-seq of coding RNA (38)
Unknown experiment type (27)
Comparative genomic hybridization by array (16)
ChIP-chip by tiling array (8)
RNA-seq of coding RNA from single cells (7)
ChIP-chip by array (4)
Other (4)
MicroRNA profiling by array (3)
Transcription profiling by tiling array (2)
RNAi profiling by array (2)
Transcription profiling by RT-PCR (2)
Methylation profiling by array (2)
RNA-seq of total RNA (2)
Human - Single-cell sequencing (1)
Cell line - High-throughput sequencing (1)
ChIP-seq (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)
Interventional (1)

Release Date

2022 (196)
2010 (193)
2025 (186)
2021 (179)
2023 (168)
2020 (143)
2011 (138)
2015 (136)
2019 (132)
2024 (128)
2018 (122)
2016 (117)
2012 (112)
2008 (112)
2017 (104)
2013 (99)
2014 (98)
2009 (72)
2007 (48)
2026 (37)
2006 (31)
2005 (29)
2004 (22)
2003 (1)
2002 (1)
2001 (1)
2000 (1)
1999 (1)
1997 (1)
1996 (1)

Lab affiliation

Howard Hughes Medical Institute Beth Israel Deaconess Medical Center Harvard Medical School (2)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University of Munich (TUM) Gregor-Mendel-Str. 4 85354 Freising Germany (1)
Biological Mass Spectrometry Lab Department of Translational Medicine (DiMeT) Center for Translational Research on Autoimmune & Allergic Diseases - CAAD University of Piemonte Orientale Corso Trieste 15/A, 28100, Novara, Italy (1)
Centro de Estudios Fotosintéticos y Bioquímicos (CEFOBI) - Consejo Nacional de Investigaciones Científicas y Tecnológicas (CONICET) - Universidad Nacional de Rosario, Suipacha 531, S2002LRK, Rosario Santa Fe -Argentina (1)
Department of Biology University of Florida (1)
Department of Cardiovascular & Metabolic Sciences, Cleveland Clinic Foundation, USA (1)
Department of Cellular and Molecular Pharmacology, University of California, San Francisco, CA (1)
Department of Chemistry and Pharmacy, Chair of Food Chemistry, Friedrich-Alexander-Universität Erlangen-Nürnberg, Nikolaus-Fiebiger-Str. 10, Erlangen 91058, Germany FAU NeW − Research Center New Bioactive Compounds, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Nikolaus-Fiebiger-Str. 10, Erlangen 91058, Germany (1)
Department of Ecogenomics and Systems Biology, University of Vienna (1)
Department of Health Sciences and Technology (D-HEST) Institute Neurosciences, ETH Zurich (1)
Department of Microbial Proteomics, Institute of Microbiology, Center for Functional Genomics of Microbes, University of Greifswald, Felix-Hausdorff-Straße 8, 17489 Greifswald, Germany (1)
Department of Molecular Biology and Biotechnology, Institute of Plant Protection—National Research Institute, Poznan, Poland (1)
Division of Cardiovascular Medicine, Department of Medicine, Abboud Cardiovascular Research Center, University of Iowa Carver College of Medicine, Iowa City, Iowa, USA. Fraternal Order of Eagles Diabetes Research Center, Pappajohn Biomedical Institute, and Heart and Vascular Center, University of Iowa, University of Iowa, Iowa City, Iowa, USA. (1)
Division of Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Campus Solna, 17165 Stockholm, Sweden (1)
Dr. Sarah Franklin, Principal Investigator, CVRTI, University of Utah (1)
Helmholtz-Diabetes Center (1)
IPICYT, Department of Molecular Biology. Camino a la Presa San José No. 2055. Col. Lomas 4ª. Section, San Luis Potosí, S.L.P., México. C.P. 78216. (1)
Institute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Joseph-Stelzmann-Strasse 26, Cologne, Germany (1)
Institute of Biotechnology, Czech Academy of Sciences, 252 50 Vestec, Prague-West, Czech Republic (1)
Max-Planck-Institute for Biology of Ageing Department of Mitochondrial Proteostasis Joseph-Stelzmann-Str. 9b 50931 Cologne (1)
Proteomics Core Facility, Biozentrum, University of Basel (1)
Ruhr-University Bochum Medizinisches Proteom-Center Clinical Proteomics - Translational Proteomics and University Hospital Knappschaftskrankenhaus Bochum Department of Anesthesia, Intensive Care Medicine, and Pain Therapy (1)
Univ. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, US41 – UAR 2014 – PLBS, F-59000 Lille, France (1)
University of Florida Biology Department (1)
University of Vienna, Department of Ecogenomics and Systems Biology (1)
University of Warwick (1)

Location

France (1)

Keyword

Bevacizumab (1)

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Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid

We investigated the relationships of the two immune-regulatory plant metabolites salicylic acid (SA) and pipecolic acid (Pip) in the establishment of plant systemic acquired resistance (SAR) in Arabidopsis thaliana induced by the bacterial pathogen Pseudomonas syringae. To characterize the transcrip...

ORGANISM(S): Arabidopsis thaliana

2015-12-27 | E-MTAB-4151 | biostudies-arrayexpress

Microbial metabolites calibrate innate immunity upon systemic viral infection

Gut microbiome dysbiosis is often associated with immune-mediated diseases. Here, we used germ-free (GF) mice, the synthetic minimal consortium OMM12, and specific pathogen-free (SPF) mice to dissect the causal influence of the microbiome on anti-viral immunity. The lack of microbial diversity af...

2026-08-01 | MTBLS7382 | MetaboLights

Barley Systemic Immunity: Dataset Local and Systemic

Leaf-to-leaf, systemic immune signaling known as systemic acquired resistance (SAR) is poorly understood in monocotyledonous plants. Here, we characterize systemic immunity in barley (Hordeum vulgare) triggered after primary leaf infection with either Pseudomonas syringae pathovar japonica (Psj) or ...

ORGANISM(S): Hordeum vulgare

2014-11-24 | E-MTAB-3063 | biostudies-arrayexpress

Barley Systemic Immunity: Dataset Induced challenged

ORGANISM(S): Hordeum vulgare

2014-11-24 | E-MTAB-3056 | biostudies-arrayexpress

Role of root-specific transcription factor MYB72 in regulation of Pseudomonas fluorescens WCS417-mediated changes in gene expression in roots of Arabidopsis thaliana

â€¢ Selected soil-borne rhizobacteria can trigger an induced systemic resistance (ISR) that is effective against a broad spectrum of pathogens. In Arabidopsis thaliana, the root-specific transcription factor MYB72 is required for the onset of ISR, but is also associated with plant survival under con...

ORGANISM(S): Arabidopsis thaliana

2016-02-11 | E-GEOD-77806 | biostudies-arrayexpress

IL-37 protects against obesity-induced inflammation and insulin resistance

Cytokines of the IL-1 family are important modulators of obesity-induced inflammation and the development of systemic insulin resistance. Here, we report that IL-37, a newly-described antiinflammatory member of the IL-1 family, affects obesity-induced inflammation and insulin resistance. IL-37 trans...

ORGANISM(S): Mus musculus

2015-05-18 | E-GEOD-58952 | biostudies-arrayexpress

Transcription profiling of Arabdiposis plants with rhizobacteria-induced systemic resistance after exposure to Spodoptera exigua or Pieris rapae herbivory

Role of rhizobacteria-induced systemic resistance in Arabidopsis on the response to Spodoptera exigua or Pieris rapae herbivory

ORGANISM(S): Arabidopsis thaliana

2008-06-10 | E-MEXP-1485 | biostudies-arrayexpress

Transcription profiling of mouse small intestine in the development of dietary fat-induced obesity and insulin resistance in C57BL/6J strain.

Obesity and insulin resistance are two major risk factors underlying the metabolic syndrome. To gain more insight in the role of the small intestine in the etiology of these metabolic disorders, a microarray study was performed on small intestines (SI) of C57BL/6J mice that were fed a high fat diet ...

ORGANISM(S): Mus musculus

2008-06-20 | E-GEOD-8582 | biostudies-arrayexpress

Phosphorylation events during systemic acquired resistance in Arabidopsis

Systemic acquired resistance (SAR) is a plant defense response that provides resistance against a wide range of pathogens at the whole-plant level after a primary infection. In this study, we used a data independent acquisition (DIA) phosphoproteomics platform based on the high-resolution mass spect...

ORGANISM(S): Arabidopsis Thaliana

2021-07-23 | PXD027512 |

Multi-omics revealed molecular mechanisms underlying guard cell systemic acquired resistance

Systemic Acquired Resistance (SAR) as a plant immune response improves immunity of distal tissue after local exposure to a pathogen. Stomata pores on leaf surfaces are formed by guard cells that recognize bacterial pathogens via pattern recognition receptors. We found that Arabidopsis thaliana plant...

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2021-09-09 | PXD022880 | Pride

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