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GenomicsProtein microarray analysis of ACAP1 interacting proteins
Protein microarray analysis of ACAP1 interacting proteins
PRJNA1499661 | ENA
TranscriptomicsTranscriptome data of interacting Salmonella Typhimurium and human host cells
The poly(A)+ and poly(A)− fractions of interacting and non-interacting cells were used for distinct library preparation of interacting and non-interacting prokaryotic pathogen and eukaryotic host cells by deepSuperSAGE. Sequencing was performed with the Illumina HiSeq 2000 platform, and one point of...
ORGANISM(S): Salmonella enterica 
2015-05-12 | E-GEOD-61730 | biostudies-arrayexpress
TranscriptomicsThe Cutoff protein regulates piRNA cluster expression and piRNA production in the Drosophila germline
In a broad range of organisms, Piwi-interacting RNAs (piRNAs) have emerged as core components of a surveillance system that protects the genome by silencing transposable and repetitive elements. A vast proportion of piRNAs is produced from discrete genomic loci, termed piRNA clusters. The molecular ...
ORGANISM(S): Drosophila melanogaster 
2013-06-07 | E-GEOD-47738 | biostudies-arrayexpress
TranscriptomicsDual-mode modulation of Smad signaling by Smad-interacting protein Sip1 is required for myelination in the central nervous system
This SuperSeries is composed of the following subset Series: GSE40506: Genome-wide mapping of Olig2 targets in primary oligodendrocytes GSE40510: Expression data from Sip1 cKO and control mice spinal cord Refer to individual Series
ORGANISM(S): Mus musculus 
2012-08-31 | E-GEOD-40431 | biostudies-arrayexpress
ProteomicsIdentification of UFBP1 interacting proteins
UFBP1 (UFM1-binding and PCI domain-containing protein 1, also called DDRGK domain-containing protein 1, Dashurin, or C20orf116) is a protein that also participates in the ufmylation conjugating systems besides the E1 ubiquitin-like modifier-activating enzyme 5 (UBA5), the E2, UFM1-conjugating enzyme...
ORGANISM(S): Homo sapiens (Human) 
2018-05-08 | PXD009051 | Pride
293t Interacting proteins Homo sapiens Orbitrap Ufbp1 
ProteomicsCharacterization of acrosin and acrosin binding protein as novel CRISP2 interacting proteins in boar spermatozoa
Previously we have reported that cysteine rich secretory protein 2 (CRISP2) is involved in high molecular weight complexes in boar spermatozoa under a native state. In the current study, CRISP2 interacting partners were identified using proteomic technology and their interaction was investigated und...
ORGANISM(S): Sus scrofa domesticus (domestic pig) 
2023-03-09 | PXD037181 | Pride
Boar spermatozoa  protein complexes  colocalization  capacitation Interacting proteins 
GenomicsExpression of thioredoxin-interacting protein (TXNIP) during megakaryopoiesis is indispensable for platelet biogenesis
Expression of thioredoxin-interacting protein (TXNIP) during megakaryopoiesis is indispensable for platelet biogenesis
PRJNA773739 | ENA
TranscriptomicsExpression data from Sip1 cKO and control mice spinal cord
Myelination by oligodendrocytes in the central nervous system (CNS) is essential for proper brain function, yet the molecular determinants that control this process remain poorly understood. The basic helix-loop-helix transcription factors Olig1 and Olig2 promote myelination, whereas bone morphogene...
ORGANISM(S): Mus musculus 
2012-08-31 | E-GEOD-40510 | biostudies-arrayexpress
ProteomicsCharacterizations of HSP90-interacting complex in renal cells using tandem affinity purification and its potential role in kidney stone formation
Heat shock protein 90 (HSP90) is a highly abundant molecular chaperone that interacts with many other intracellular proteins to regulate various cellular processes. However, compositions of the HSP90-interacting complex remain underinvestigated. This study thus aimed to characterize such complex in ...
ORGANISM(S): Homo sapiens (Human) 
2018-12-17 | PXD011432 | Pride
Chaperone  heat shock protein 90  hek293t  kidney stone  sirna  tap tag 
TranscriptomicsPrognostic significance of overexpression of Traf2- and Nck- interacting kinase (TNIK) in colorectal cancer [gene expression]
Introduction: The potential of expression profiling using microarray analysis as a tool to predict the prognosis for different types of cancer has been realized. This study aimed to identify a novel biomarker for colorectal cancer (CRC). Experimental design: The expression profiles of cancer cells ...
ORGANISM(S): Homo sapiens 
2015-11-21 | E-GEOD-64256 | biostudies-arrayexpress
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