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ProteomicsEpitranscriptomic editing screening identifies functional m6A Sites
This dataset supports the identification of proteins associated with CHD9 by immunoprecipitation-mass spectrometry (IP-MS) in prostate cancer cells. Endogenous CHD9 was enriched using anti-CHD9 antibodies (with IgG controls), and co-enriched proteins were identified by LC-MS/MS. The resulting protei...
ORGANISM(S): Homo sapiens (Human) 
2026-01-01 | PXD072235 | Pride
M6a  prostate cancer  epitranscriptomic editing  crispr screening  prostate cancer 
UnknownInflammatory Biomarkers, Hematopoietic Stem Cells, and Symptoms in Breast Cancer Patients Undergoing Adjuvant Radiation Therapy.
Not available
S-EPMC7583146 | biostudies-literature
ProteomicsThe role of the AP-1 adaptor complex in outgoing and incoming membrane trafficThe role of the AP-1 adaptor complex in outgoing and incoming membrane traffic
The AP-1 adaptor complex is found in all eukaryotes, but it has been implicated in different pathways in different organisms. To look directly at AP-1 function, we generated stably transduced HeLa cells co-expressing tagged AP-1 and various tagged membrane proteins. Live cell imaging showed that AP-...
ORGANISM(S): Homo sapiens (Human) 
2024-04-03 | PXD050449 | Pride
Ap-1 Silac Ip-ms Trafficking 
UnknownSelf-harm attempters' perception of community services and its implication on service provision.
Not available
S-EPMC6608664 | biostudies-literature
UnknownBioID-based Identification of Skp Cullin F-box (SCF)β-TrCP1/2 E3 Ligase Substrates.
Not available
S-EPMC4587326 | biostudies-literature
GenomicsNkx2-1 Represses a Latent Gastric Differentiation Program in Lung Adenocarcinoma
Tissue-specific differentiation programs become dysregulated during cancer evolution. The transcription factor Nkx2-1 is a master regulator of pulmonary differentiation that is downregulated in poorly differentiated lung adenocarcinoma. Here we use conditional murine genetics to study the fate of l...
ORGANISM(S): Mus musculus 
2013-04-09 | E-GEOD-43252 | biostudies-arrayexpress
UnknownApplication of a target enrichment-based next-generation sequencing protocol for identification and sequence-based prediction of pneumococcal serotypes.
Not available
S-EPMC3984734 | biostudies-literature
TranscriptomicsExpression profiling of bronchial epithelium
19 bronchial epithelial SAGE libraries were constructed and analyzed in this study. Discussed in the study: IDENTIFICATION OF NOVEL LUNG GENES IN BRONCHIAL EPITHELIUM BY SERIAL ANALYSIS OF GENE EXPRESSION Kim M. Lonergan1, Raj Chari1, Ronald J. deLeeuw1, Ashleen Shadeo1, Bryan Chi1, Ming-Sound Tsa...
ORGANISM(S): Homo sapiens 
2006-07-14 | E-GEOD-3707 | biostudies-arrayexpress
UnknownRefined RIP-seq protocol for epitranscriptome analysis with low input materials.
Not available
S-EPMC6136692 | biostudies-literature
UnknownDirect detection and prediction of all pneumococcal serogroups by target enrichment-based next-generation sequencing.
Not available
S-EPMC4313294 | biostudies-literature
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