Trafficking - OmicsDI

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Instrument Platform

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Publication Date

2026 (281)
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2020 (141)
2014 (95)
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UNIPROT ID/AC

P01137 (2)
P36897 (2)
OTOGL_MOUSE (2)
ZRAN1_MOUSE (2)
F6QRE9_MOUSE (2)
TTL11_MOUSE (2)
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TT21A_MOUSE (2)
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NKX32_MOUSE (2)
P05113 (1)
O95267 (1)
P60568 (1)
P14784 (1)
P00533 (1)
P37173 (1)
Q15796 (1)
Q13485 (1)
P62070 (1)
Q07889 (1)
P98077 (1)
P62993 (1)
P31785 (1)

ENSEMBL ID

ENSG00000170477 (2)

CHEBI ID

CHEBI:64433 (4)
CHEBI:64516 (4)
CHEBI:64517 (4)
CHEBI:66849 (4)
CHEBI:66855 (3)
CHEBI:64424 (3)
CHEBI:64446 (3)
CHEBI:64523 (3)
CHEBI:66857 (3)
CHEBI:15843 (2)
CHEBI:33282 (1)
CHEBI:50730 (1)
CHEBI:10112 (1)
CHEBI:49172 (1)
CHEBI:16412 (1)
CHEBI:34159 (1)
CHEBI:35222 (1)
CHEBI:27485 (1)
CHEBI:15554 (1)
CHEBI:15553 (1)
CHEBI:15555 (1)
CHEBI:18295 (1)
CHEBI:35366 (1)
CHEBI:16595 (1)
CHEBI:18035 (1)
CHEBI:18348 (1)
CHEBI:17526 (1)
CHEBI:16749 (1)
CHEBI:49183 (1)
CHEBI:29108 (1)

Metabolite Name

Adenosine (7)
Nicotinamide (6)
Methionine (6)
Arginine (6)
Serine (6)
Alanine (6)
Cytosine (6)
Creatine (6)
4-Hydroxyproline (5)
Leucine (5)
Betaine (5)
Triethanolamine (5)
Pantothenic acid (5)
Hippuric acid (5)
Tryptophan (5)
Asparagine (5)
Histamine (5)
Proline (5)
Phenylalanine (5)
Uracil (5)
Guanine (5)
Glycine (5)
Choline (5)
Inosine (5)
Dimethylglycine (4)
5-Aminopentanoic acid (4)
Valine (4)
2-Aminoadipic acid (4)
N-Acetylmethionine (4)
Thymine (4)

First Public Date

2026 (189)
2025 (170)
2014 (150)
2024 (140)
2023 (102)
2021 (80)
2020 (73)
2022 (63)
2019 (63)
2018 (39)
2017 (35)
2015 (30)
2013 (23)
2016 (14)

Modelling Approach

Ordinary differential equation model (16)
Computational model (1)
Delayed differential equation model (1)

Study status

Terminated (1)

Lab affiliation

School of Life Sciences, University of Warwick (9)
Department of Proteomics and Signal Transduction, Systems Biology of Membrane Trafficking Research Group, Max-Planck Institute of Biochemistry, Martinsried, Germany (5)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (5)
Head of the Curie Institute Mass Spectrometry Platform (5)
ARC Centre of Excellence in Plant Energy Biology, M316, 35 Stirling Hwy, 6009, WA, Australia Faculty of Science, The University of Western Australia (4)
National Engineering Research Center for the Emergency Drug, Beijing Institute of Pharmacology and Toxicology, Beijing 100850, China (3)
Center of Human and Molecular Biology (ZHMB), Saarland University School of Medicine, Homburg, Germany (3)
Technion Faculty of Medicine and Network Biology Research Laboratories, (3)
Key Laboratory of Brain Functional Genomics of Shanghai and Ministry of Education, Institute of Brain Functional Genomics, School of Life Science and the Collaborative Innovation Center for Brain Science, East China Normal University, Shanghai, China (3)
University of Edinburgh (3)
chemistry biochemistry UCSD (2)
Department of Molecular Microbiology & Immunology Oregon Health & Science University 3181 SW Sam Jackson Park Road Portland, Oregon 97239, USA (2)
Proteome Dynamics, Max Delbrück Center for Molecular Medicine, Robert-Rössle-Str. 10, D-13092 Berlin, Germany Charité-Universitätsmedizin Berlin, 10117 Berlin, Germany (2)
Department of Cell Biology, Harvard Medical School, 240 Longwood Ave., Boston, MA 02115 (2)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA (2)
German Center for Neurodegenerative Diseases Munich, Neuroproteomics, Feodor-Lynen Str. 17, D-81377 Munich, Germany (2)
Molecular Cell Biology of Autophagy Laboratory, The Francis Crick Institute, London, United Kingdom (2)
Cell Signaling and Metabolism Group German Cancer Research Center (DKFZ) (2)
Institute of Animal Science (IAS), Chinese Academy of Agricultural Sciences (CAAS) (2)
Department of Infectious Diseases, Molecular Virology, Heidelberg University, Im Neuenheimer Feld 344, Heidelberg, Germany (2)
Max Planck Institute of Immunobiology and Epigenetics Proteomics Unit Stuebeweg 51 79108 Freiburg, Germany (2)
Nutrient Metabolism & Signalling Laboratory, Metabolism, Diabetes and Obesity Program, Biomedicine Discovery Institute, Monash University, Victoria 3800, Australia (2)
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Queen's University Belfast (2)
Discovery Proteomics Facility University of Oxford (2)
Calico Life Sciences (2)
Department of Molecular & Clinical Cancer Medicine Institute of Systems, Molecular & Integrative Biology University of Liverpool (2)
Florida State University College of Medicine (2)
Department of Immunobiology, University of Lausanne (155 chemin des Boveresses 1066 Epalinges Switzerland) (2)
Departments of Chemistry, Biological Sciences, Pathology, Microbiology and Immunology, Vanderbilt University (2)

IsPrivate

False (19)

Submitter Keywords

Ersilia (1)
FAIR-AIML (1)
Machine Learning Model (1)

Classification

bacteria (9)
fungi (8)
protozoa (6)

Modification

4-tetrahydrothiazine-3-carboxylic acid (3)
2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (326)
RNA-seq of coding RNA (45)
Unknown experiment type (13)
ChIP-seq (12)
RNA-seq of coding RNA from single cells (7)
Comparative genomic hybridization by array (6)
Other (6)
Transcription profiling by SAGE (5)
Animal - High-throughput sequencing (4)
ChIP-chip by array (4)
ChIP-chip by tiling array (3)
RNAi profiling by array (3)
Methylation profiling by high throughput sequencing (3)
RNA-seq of non coding RNA (2)
RIP-chip by array (1)
Translation profiling (1)
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Release Date

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2006 (215)
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2000 (42)
2001 (37)
1999 (29)
1998 (22)
1997 (12)

Location

United States (1)

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Seipin Governs Caveolin-1 Trafficking Through Modulating Sphingolipid-Glycerolipid Balance

Dysregulation of Caveolin-1 (CAV1), a key component of caveolae, leads to pleiotropic disorders; yet, the mechanisms controlling its trafficking remain unclear. Here, we show that the lipid droplet (LD) biogenesis factor seipin controls CAV1 localization. Seipin deficiency in mice and HeLa cells ...

2025-07-22 | MTBLS12759 | MetaboLights

An Atlas of Inter-Organ Metabolite Trafficking in Health and Atherogenic Conditions

Mammalian organs continuously exchange circulating metabolites for organismal health and survival. However, the landscape of this fundamental process and its perturbation by diet and disease is unknown. Using arteriovenous metabolomics, tissue transcriptomics, hormone arrays and multiple metaboli...

2025-05-12 | MTBLS10288 | MetaboLights

Ceramide Disrupts TM9SF2-PGK1 Axis to Redirect PD-L1 Trafficking and Enhance Antitumor Immunity

The PD-1/PD-L1 axis represents a cornerstone of cancer immunotherapy, yet the dynamic shuttling of PD-L1 between endosomal recycling and lysosomal degradation routes limits durable responses. Using a CRISPR screen targeting glycosphingolipid metabolism, we identify TM9SF2 as a key regulator of PD...

2026-02-05 | MTBLS13838 | MetaboLights

Starbuck1990 - EGF binding and trafficking dynamics in Fibroblast

mathematical model, with accompanying quantitative experimental data, for binding and trafficking properties of the epidermal growth factor (EGF) receptor on B82 fibroblasts, and propose a theoretical dependence of cell proliferation rate on these properties. Model encoded by Matthieu Maire adn subm...

2020-03-19 | MODEL2003190005 | BioModels

Human trafficking risk factors, health impacts, and opportunities for intervention in Uganda: a qualitative analysis.

Not available

S-EPMC10712038 | biostudies-literature

Regulator trafficking on bacterial transcription units in vivo

The in vivo trafficking patterns on DNA by the bacterial regulators of transcript elongation Sigma70, Rho, NusA, and NusG and the explanation for high promoter-proximal levels or peaks of RNA polymerase (RNAP) are unknown. Genome-wide ChIP-chip on E. coli revealed distinct association patterns of r...

ORGANISM(S): Escherichia coli

2010-05-14 | E-GEOD-13938 | biostudies-arrayexpress

A reliability analysis: human trafficking curriculum assessment tool (HT-CAT) for health care provider human trafficking trainings.

Not available

S-EPMC11927203 | biostudies-literature

Calreticulin enhances the secretory trafficking of a polymerogenic alpha1-antitrypsin

α-1-antitrypsin (AAT) regulates protease activity in the lungs and liver. The presence of one or more copies of a mutant Z allele (AAT (E342K), called ATZ), results in low serum levels of ATZ along with intracellular inclusions of polymeric forms, causing lung emphysema and liver cirrhosis. Our expe...

ORGANISM(S): Homo sapiens (Human)

2020-09-24 | PXD020562 | Pride

Regulation of podocalyxin trafficking by Rab small GTPases in 2D and 3D epithelial cell cultures.

Not available

S-EPMC4862332 | biostudies-literature

Sex Trafficking Prevention for Youth with Intellectual and Developmental Disabilities: Service Provider Perspectives.

Not available

S-EPMC12360402 | biostudies-literature

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