Islam A A - OmicsDI

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Unknown (6104)
Transcriptomics (55)
Proteomics (35)
Genomics (29)
Models (4)
Metabolomics (4)

Organisms

Mus musculus (33)
Aerococcus urinae NBRC 15544 = CCUG 36881 (32)
Andropogon gerardi (32)
Bacteria (32)
Bartonella quintana JK 31 (32)
Canis lupus familiaris (32)
Cnidaria (32)
Ectopseudomonas oleovorans CECT 5344 (32)
Ensifer adhaerens (32)
Halictus scabiosae (32)
Human immunodeficiency virus 1 (32)
Mesocricetus auratus (32)
Miscanthus x giganteus (32)
Morchella importuna (32)
Mus musculus (32)
Panicum virgatum (32)
Pseudomonas aeruginosa PA103 (32)
Pseudomonas aeruginosa SJTD-1 (32)
Rabies virus Nishigahara RCEH (32)
Rattus norvegicus (32)
Rattus rattus (32)
Rhodococcus jostii RHA1 (32)
Homo sapiens (24)
Drosophila melanogaster (7)
Vibrio cholerae (5)
Dehalococcoides (1)
Rhodospirillum rubrum (1)
Cupriavidus metallidurans CH34 (1)
Mus (1)
Escherichia coli (1)

Organisms

Vibrio cholerae (3)
Mus musculus (2)
Homo sapiens (2)

Repository

biostudies-arrayexpress (65)
pride (32)
ENA (14)
BioModels (4)
geo (4)
MetaboLights (4)
MassIVE (2)
EGA (1)
iProX (1)

Tissue

Cell culture (6)
Endosperm (5)
Epithelial cell (4)
Permanent cell line cell (3)
Blood (2)
Plant cell (2)
Blood cell (1)
Bone marrow (1)
Brain (1)
Embryo (1)
Endothelial cell of hepatic sinusoid (1)
Fungus (1)
Heart (1)
Liver (1)
Neutrophil (1)
Oligodendrocyte (1)
Primary cell (1)
Prokaryotic cell (1)
Respiratory epithelial cell (1)
Shoot (1)
Skin (1)
Stem cell (1)
T cell (1)

Disease

Breast cancer (3)
Acute leukemia (1)
Colon cancer (1)
Demyelinating disease (1)
Disease free (1)
Fatty liver disease (1)
Mucinous pancreas adenocarcinoma (1)
Oligodendroglioma (1)
Pulmonary tuberculosis (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (32)
Shotgun proteomics (18)
Bottom-up proteomics (6)
Mass spectrometry (4)
Data-dependent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (2)
Illumina HumanOmni2.5-8 (1)
Affinity proteomics (1)
All-ion fragmentation (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

NextSeq 500 (7)
Illumina HiSeq 2000 (6)
Gas Chromatography MS - positive (2)
FACSAria (BD) (1)
Illumina NovaSeq X (1)
Illumina NovaSeq 6000 (1)
LTQ Orbitrap Velos (1)
LTQ Orbitrap XL (1)
MS Imaging - (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2013 (13)
2022 (11)
2023 (9)
2015 (9)
2024 (8)
2014 (8)
2018 (6)
2021 (5)
2019 (5)
2016 (5)
2007 (5)
2026 (5)
2025 (4)
2010 (4)
2012 (3)
2011 (3)
2009 (3)
2017 (2)
2020 (2)
2005 (1)

CHEBI ID

CHEBI:17148 (2)
CHEBI:17475 (1)
CHEBI:32980 (1)
CHEBI:18287 (1)
CHEBI:17822 (1)
CHEBI:25094 (1)
CHEBI:18237 (1)
CHEBI:15356 (1)
CHEBI:22660 (1)
CHEBI:18186 (1)
CHEBI:28300 (1)
CHEBI:18257 (1)
CHEBI:16708 (1)
CHEBI:15887 (1)
CHEBI:25017 (1)
CHEBI:15824 (1)
CHEBI:28842 (1)
CHEBI:15428 (1)
CHEBI:15741 (1)
CHEBI:6650 (1)
CHEBI:28044 (1)
CHEBI:16196 (1)
CHEBI:16335 (1)
CHEBI:27266 (1)
CHEBI:7916 (1)
CHEBI:15891 (1)
CHEBI:16449 (1)
CHEBI:16857 (1)
CHEBI:16027 (1)
CHEBI:27897 (1)

Metabolite Name

Oleic acid (1)
Octadecanoic acid (1)
Hexadecanoic acid (1)
Putrescine, 4TMS (1)
Phloretic acid, 2TMS (1)
L-(-)-Fucose, 4TMS, methyloxime (1)
Aminomalonic acid, 3TMS (1)
5-Aminovaleric acid, 3TMS (1)
Pantothenic acid (1)
Glutamic acid (1)
Aspartic acid (1)
Adenosine 5'-monophosphate (1)
L-isoleucine (1)
Tryptophan (1)
Taurine (1)
Serine (1)
Lysine (1)
Hypoxanthine (1)
Cysteine (1)
Adenine (1)
Phenylalanine (1)
Tyrosine (1)
Glutamine (1)
Ornithine (1)
Alanine (1)
Valine (1)
Adenosine (1)
Leucine (1)
Glycine (1)
Putrescine (1)

First Public Date

2014 (3)
2024 (2)
2023 (2)
2021 (2)
2017 (2)
2025 (1)
2018 (1)
2016 (1)

Modelling Approach

Other (2)
Constraint-based model (1)

Lab affiliation

Department of Bioactive and Functional Food Chemistry, Institute of Applied Biosciences, Karlsruhe Institute of Technology (KIT), Karlsruhe, Germany (2)
Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center (2)
AGES - Austrian Agency for Health and Food Safety, Institute for Animal Nutrition and Feed, Vienna, Austria (1)
ARC Centre of Excellence in Plant Energy Biology, University of Western Australia, Bayliss Building M316, Crawley, WA 6009, Australia (1)
Antwerp University (1)
Aquatic Omics Lab, Science department, Ontario Tech University (1)
Assistant Professor of Neurosurgery Department of Neurosurgery Houston Methodist Research Institute Weill Cornell Medical College (1)
Associate Professor Department of Medicine-Cardiovascular Sciences Baylor College of Medicine Houston, TX USA (1)
Associate Professor, Department of Biochemistry & Molecular Biology, UTMB Mass Spectrometry Director, University of Texas Medical Branch – Galveston, Texas, USA (1)
Babraham Institute (1)
Brazilian Biosciences National Laboratory (LNBio), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, Sao Paulo, Brazil, Zip Code 13083-970 (1)
Center for Staphylococcal Research Department of Pathology and Microbiology University of Nebraska Medical Center (1)
Chemistry & Biochemistry, University of Maryland, College Park, MD, USA (1)
Cincinnati Children’s Hospital Medical Center (1)
Core Facility Mass Spectrometry BOKU, University of Natural Resources and Life Sciences, Vienna, Austria (1)
DIRECTOR, THE PICOWER INSTITUTE FOR LEARNING AND MEMORYAT MIT PICOWER PROFESSOR OF NEUROSCIENCE, DEPARTMENT OF BRAIN AND COGNITIVE SCIENCES SENIOR ASSOCIATE MEMBER, BROAD INSTITUTE (1)
Department of Clinical Medicine, University of Tromsø 9037 Tromsø, Norway (1)
Department of Plant and Microbial Biology, University of California, Berkeley, Berkeley, CA, 94720, USA (1)
Director, Research Integrity and Compliance Review Office (http://ricro.colostate.edu/) Associate Professor, Mycobacteria Research Laboratories Dept of Microbiology, Immunology,& Pathology (http://www.cvmbs.colostate.edu/DirectorySearch/Search/MemberProfile/CVMBS/3607) Colorado State University Ft. Collins, CO 80523, USA (1)
Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, Minnesota, USA (1)
Division of Pharmacoengineering and Molecular Pharmaceutics, Eshelman School of Pharmacy, University of North Carolina at Chapel Hill (1)
Functional Proteomics Laboratory, Regional Centre for Biotechnology, NCR Biotech Science Cluster, Faridabad 121001, INDIA. (1)
HTI, Hong Kong Polytechnic University, Hong Kong (1)
Helmholtz Centre for Infection Reasearch, Structure and Function of proteins Division, Cellular Proteomics Group, Germany (1)
Lowy Cancer Research Centre School of Medical Sciences UNSW SYDNEY NSW 2052 AUSTRALIA (1)
Professor at Department of Pharmacy, Drug Delivery, Uppsala University (1)
School of Chemistry & Biochemistry College of Sciences Georgia Institute of Technology (1)
School of Pharmacy Mass Spectrometry Center, Department of Pharmaceutical Sciences, University of Maryland, Baltimore. (1)
Senior Staff Scientist Department of Medicine -Gastroenterology and Hepatology Baylor College of Medicine Houston, TX US (1)
Sunnybrook Research Institute, Toronto, ON, Canada / Department of Biochemistry, University of Toronto, Toronto, ON, Canada / Department of Biochemistry and Molecular Biology, Alberta Children’s Hospital Research Institute, Hotchkiss Brain Institute, University of Calgary, Calgary, AB, Canada / Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada (1)

IsPrivate

False (4)

Model Flag

Non Kinetic (1)

Submitter Keywords

FAIR-AIML (1)
Machine Learning Model (1)
FROG (1)

Classification

bacteria (3)

Study type

RNA-seq of coding RNA (20)
Transcription profiling by array (16)
ChIP-seq (11)
RNA-seq of coding RNA from single cells (7)
Methylation profiling by array (4)
ChIP-chip by tiling array (2)
Comparative genomic hybridization by array (2)
Cell line - Single-cell sequencing (1)
Human - Single-cell sequencing (1)
Transcription profiling by RT-PCR (1)

Release Date

2022 (931)
2023 (858)
2025 (850)
2024 (766)
2021 (759)
2020 (540)
2019 (329)
2018 (264)
2017 (166)
2026 (124)
2016 (115)
2015 (112)
2014 (109)
2013 (70)
2011 (45)
2012 (44)
2010 (25)
2009 (21)
2008 (10)
2006 (10)
2007 (8)
2005 (7)
2004 (2)
2002 (1)
2001 (1)
2000 (1)
1998 (1)

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Effect of short-term use of FFP2 (N95) masks on the salivary metabolome of young healthy volunteers: a pilot study.

The use of face masks has become an integral part of public life in the post-pandemic era. However, the understanding of the effect of wearing masks on physiology remains incomplete and is required for informing public health policies. For the first time, we report the effects of wearing FFP2 masks ...

2024-08-07 | MTBLS5803 | MetaboLights

Effects of diethylene glycol contamination of pharmaceutical products on unexplained acute kidney injury in children: a systematic review.

Not available

S-EPMC11298774 | biostudies-literature

Trade and Geography in the Spread of Islam.

Not available

S-EPMC8046173 | biostudies-literature

A cross-sectional study on the practice of wet nursing among Muslim mothers.

Not available

S-EPMC7819175 | biostudies-literature

Effect of pesticide exposure on stunting incidence: a systematic review and meta-analysis.

Not available

S-EPMC11471919 | biostudies-literature

A mixed-method analysis of provider adherence to integrated antenatal care guideline in BEmONC and Non BEmONC primary health center: An Indonesian case.

Not available

S-EPMC11349106 | biostudies-literature

Unravelling the link between SARS-CoV-2 mutation frequencies, patient comorbidities, and structural dynamics.

Not available

S-EPMC10939192 | biostudies-literature

Improving genomic prediction of vitamin C content in spinach using GWAS-derived markers.

Not available

S-EPMC11844115 | biostudies-literature

ChIP-seq using a Dp1 antibody in Drosophila S2R+ cells

Here we report the identification of genomic regions of DNA bound by Dp1 in Drosophila S2R+ cells. Dp1 is a dimerization partner of several E2F transcription factors and is needed for E2F target promoter binding. We find that Dp1 binds the promoter regions of genes important for oxidative phosphoryl...

ORGANISM(S): Drosophila melanogaster

2013-11-25 | E-GEOD-39393 | biostudies-arrayexpress

Brain death and Islam: the interface of religion, culture, history, law, and modern medicine.

Not available

S-EPMC4188144 | biostudies-literature

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6231 Results

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