Itoh Y Y - OmicsDI

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Unknown (1310)
Transcriptomics (45)
Proteomics (22)
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Oryza sativa Japonica Group (18)
Homo sapiens (17)
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Saccharomyces cerevisiae (7)
Oryza sativa (3)
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Organisms

Oryza sativa (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (46)
jPOST (11)
pride (10)
ENA (2)
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Tissue

Cell culture (2)
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Disease

Acute leukemia (1)
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Mass Spectrometry (10)
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Affinity purification coupled with mass spectrometry proteomics (1)
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Top-down proteomics (1)

Instrument Platform

Illumina Genome Analyzer IIx (5)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Exactive (Thermo Scientific) (1)

Publication Date

2012 (14)
2011 (10)
2014 (7)
2010 (7)
2022 (7)
2023 (4)
2015 (3)
2025 (3)
2024 (3)
2008 (2)
2018 (2)
2021 (2)
2020 (1)
2013 (1)
2007 (1)
2019 (1)
2026 (1)

UNIPROT ID/AC

3827.XP_004488609.1 (1)
3827.XP_004489552.1 (1)
3827.XP_004492148.1 (1)
3827.XP_004495066.1 (1)
3827.XP_004495096.1 (1)
3827.XP_004496079.1 (1)
3827.XP_004496465.1 (1)
3827.XP_004499231.1 (1)
3827.XP_004504448.1 (1)
3827.XP_004505950.1 (1)
3827.XP_004507278.1 (1)
3827.XP_004507524.1 (1)
3827.XP_004508257.1 (1)
3827.XP_004508404.1 (1)
3827.XP_004508599.1 (1)
3827.XP_004508756.1 (1)
3827.XP_004509343.1 (1)
3827.XP_004511685.1 (1)
3827.XP_004512510.1 (1)
3827.XP_004516180.1 (1)
3827.XP_004516603.1 (1)
A0A067XTY1_CICAR (1)
A0A1S2X989_CICAR (1)
A0A1S2X9A1_CICAR (1)
A0A1S2X9D4_CICAR (1)
A0A1S2X9E4_CICAR (1)
A0A1S2X9H9_CICAR (1)
A0A1S2X9Z7_CICAR (1)
A0A1S2XAD1_CICAR (1)
A0A1S2XAI8_CICAR (1)

CHEBI ID

CHEBI:133000 (1)
CHEBI:133742 (1)
CHEBI:135630 (1)
CHEBI:143868 (1)
CHEBI:143869 (1)
CHEBI:143870 (1)
CHEBI:143871 (1)
CHEBI:15937 (1)
CHEBI:23359 (1)
CHEBI:28121 (1)
CHEBI:3962 (1)
CHEBI:41320 (1)
CHEBI:4822 (1)
CHEBI:48574 (1)
CHEBI:72402 (1)
CHEBI:76361 (1)
CHEBI:80555 (1)
CHEBI:84094 (1)
CHEBI:9667 (1)

Metabolite Name

1,3,8-trihydroxy-4-methyl-2,7-diprenylxanthone (1)
17-Hydroxypregnenolone sulfate (1)
Carbanilide (1)
Colchicine (1)
Coumaroylquinic acid (1)
Curcumin II (1)
Drotaverine (1)
Endoxifen (1)
Endoxifen isotope (1)
Ergonovine (1)
Ethyl vanillin isobutyrate (1)
Harmine (1)
Hydrojuglone glucoside (1)
PS(14:0 14:0) (1)
Phenylbutazone (1)
Physalin (1)
Pregnenolone sulfate (1)
Testosterone sulfate (1)
Thalicpureine (1)
Triamcinolone (1)

First Public Date

2014 (2)

Study type

Transcription profiling by array (27)
RNA-seq of coding RNA (7)
Unknown experiment type (4)
ChIP-chip by tiling array (4)
Animal - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)

Release Date

2022 (134)
2021 (129)
2025 (103)
2023 (99)
2020 (89)
2024 (84)
2019 (81)
2018 (76)
2017 (75)
2014 (72)
2016 (71)
2015 (63)
2012 (41)
2013 (37)
2011 (34)
2010 (31)
2008 (21)
2009 (21)
2026 (20)
2002 (12)
2003 (10)
2001 (10)
2007 (9)
2006 (9)
2005 (9)
2004 (7)
2000 (4)
1998 (2)
1997 (2)
1999 (1)

Lab affiliation

1.Department of Molecular Biology and Howard Hughes Medical Institute, Massachusetts General Hospital, Boston, MA 02114, USA, 2.Department of Systems Biology, Harvard Medical School, Boston, MA 02115, USA, 3.Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA. (1)
Cincinnati Children’s Hospital Medical Center (1)
Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, Chiba, Japan. (1)
Department of Biomedical engineering, Lerner Research Institute, Cleveland Clinic (1)
Department of Biotechnology, Delft University of Technology, The Netherlands. (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institute, 17177 Stockholm, Sweden. Max Planck Institute for Biology of Ageing-Karolinska Institutet Laboratory, Karolinska Institutet, Stockholm 17165, Sweden. (1)
Division of Gastroenterology and Hepatology, Graduate School of Medical and Dental Sciences, Niigata University (1)
Laboratory of the Regulation for Intractable Infectious Diseases, National Institute of Biomedical Innovation, Health and Nutrition, Japan (1)
Professor at Department of Medical Biochemistry and Microbiology; Biochemistry and Cancer;Uppsala University, Sweden (1)
University of Tsukuba (1)

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X and Y chromosome complement influence adiposity and metabolism in mice.

Not available

S-EPMC3578992 | biostudies-literature

Displacement and re-accumulation of centromeric cohesin during transient pre-anaphase centromere splitting

The ring-shaped cohesin complex links sister chromatids until their timely segregation during mitosis. Cohesin is enriched at centromeres, where it provides the cohesive counter-force to bi-polar tension produced by the mitotic spindle. As a consequence of spindle tension, centromeric sequences tran...

ORGANISM(S): Saccharomyces cerevisiae

2007-09-29 | E-GEOD-8661 | biostudies-arrayexpress

Crystal structures of copper-depleted and copper-bound fungal pro-tyrosinase: insights into endogenous cysteine-dependent copper incorporation.

Not available

S-EPMC3724665 | biostudies-literature

Eubacterial diterpene cyclase genes essential for production of the isoprenoid antibiotic terpentecin.

Not available

S-EPMC99688 | biostudies-literature

Activity of Rho-family GTPases during cell division as visualized with FRET-based probes.

Not available

S-EPMC2172791 | biostudies-literature

Limitations of liver biopsy and non-invasive diagnostic tests for the diagnosis of nonalcoholic fatty liver disease/nonalcoholic steatohepatitis.

Not available

S-EPMC3923022 | biostudies-literature

Bisecting GlcNAc residues on laminin-332 down-regulate galectin-3-dependent keratinocyte motility.

Not available

S-EPMC2823405 | biostudies-literature

Chromosomal association of the Smc5/6 complex reveals that it functions in differently regulated pathways

The SMC protein complexes safeguard genomic integrity through their functions in chromosome segregation and repair. The chromosomal localization of the budding yeast Smc5/6 complex here determined reveals that the complex works specifically on the duplicated genome in differently regulated pathways....

ORGANISM(S): Saccharomyces cerevisiae

2010-06-11 | E-GEOD-4808 | biostudies-arrayexpress

High-resolution promoter map of human limbal epithelial cells cultured with keratinocyte growth factor and rho kinase inhibitor.

Not available

S-EPMC5460231 | biostudies-literature

Suv4-20h2 protects from influenza virus infection through suppression of chromatin loop formation

The spatial organization of chromatin is known to be highly dynamic in response to environmental stress. However, it remains unknown how chromatin dynamics contributes to or modulate the disease pathogenesis. Here we show that upon influenza virus infection, H4K20me3 methyltransferase Suv4-20h2 bin...

ORGANISM(S): Mus musculus (Mouse)

2021-05-13 | PXD025676 | Pride

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1381 Results

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