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ProteomicsCharacterizing cardiac molecular mechanisms of mammalian hibernation via quantitative proteogenomics.
This study uses advanced proteogenomic approaches in a non-model organism to elucidate cardioprotective mechanisms used during mammalian hibernation. Mammalian hibernation is characterized by dramatic reductions in body temperature, heart rate, metabolism and oxygen consumption. These changes pose s...
ORGANISM(S): Spermophilus tridecemlineatus (Thirteen-lined ground squirrel) 
2015-11-03 | PXD002457 | Pride
Keywords: proteogenomics Heart. Galaxy-p Hibernation 
ProteomicsProtein expression patterns associated with sucrose-induced dysbiosis are conserved across taxonomically diverse oral microcosm biofilm models of dental caries.
The lesions of enamel caries can be considered as the outcome of dysbiotic changes in the biofilm community of supragingival dental plaque. Demineralization occurs as the cumulative outcome of repeated shifts towards a less diverse microbiota that produces and tolerates a low pH environment in tooth...
ORGANISM(S): Streptococcus mutans 19 
2016-01-04 | PXD003151 | Pride
Dental caries Metaproteomics Oral microbiome Galaxy-p Dysbiosis 
UnknownA two-step database search method improves sensitivity in peptide sequence matches for metaproteomics and proteogenomics studies.
Not available
S-EPMC3633484 | biostudies-literature
UnknownWorkflow for analysis of high mass accuracy salivary data set using MaxQuant and ProteinPilot search algorithm.
Not available
S-EPMC3618284 | biostudies-literature
ProteomicsCritical Assessment of Metaproteome Investigation (CAMPI): a Multi-Lab Comparison of Established Workflows
Metaproteomics, the study of the collective proteome within a microbial ecosystem, has substantially grown over the past few years. This growth comes from the increased awareness that it can powerfully supplement metagenomics and metatranscriptomics analyses. Although metaproteomics is more challeng...
ORGANISM(S): Escherichia Coli (ncbitaxon:562) Homo Sapiens (ncbitaxon:9606) 
2022-06-08 | MSV000089620 | MassIVE
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