Jang H H - OmicsDI

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Unknown (3703)
Proteomics (75)
Transcriptomics (47)
Genomics (23)
Metabolomics (6)

Organisms

Homo sapiens (87)
Mus musculus (32)
Arabidopsis thaliana (8)
Severe acute respiratory syndrome coronavirus 2 (2)
Burkholderia glumae (1)
Vibrio vulnificus (1)
Chlorocebus sabaeus (1)
Escherichia coli (1)
Glycine max (1)
Panax ginseng (1)
Sus scrofa domesticus (1)
West Nile virus (1)
Xanthomonas oryzae pv. oryzae KACC 10331 (1)

Repository

pride (67)
biostudies-arrayexpress (50)
EGA (21)
MassIVE (7)
MetaboLights (5)
GNPS (1)

Tissue

Cell culture (15)
Brain (12)
Epithelial cell (9)
Permanent cell line cell (7)
Kidney (4)
Cerebrospinal fluid (3)
HeLa cell (2)
Mature astrocyte (2)
Stem cell (2)
Adrenal cortex (1)
Blood (1)
Blood plasma (1)
Blood serum (1)
Colon epithelial cell (1)
Cyst (1)
Early embryonic cell (1)
Embryo (1)
Embryonic fibroblast (1)
Embryonic stem cell (1)
Gastrocnemius (1)
Glutamatergic neuron (1)
Heart (1)
Immature microglial cell (1)
Kidney epithelial cell (1)
Leaf (1)
Liver (1)
Lung (1)
MEF cell (1)
Macrophage (1)
Pancreas (1)

Disease

Parkinson's disease (3)
COVID-19 (2)
Colon cancer (2)
Disease free (2)
Hepatocellular carcinoma-non tumorous region (1)
Adrenal cortical adenocarcinoma (1)
Alzheimer's disease (1)
Brain glioblastoma multiforme (1)
Breast cancer (1)
Congenital heart disease (1)
Dementia (1)
Duchenne muscular dystrophy (1)
Mild cognitive impairment (1)
Multiple sclerosis (1)
Neurilemmomatosis (1)
Noonan syndrome (1)
Pancreatic cancer (1)
Pancreatic intraductal papillary-mucinous neoplasm (1)
Progressive supranuclear palsy (1)
Prostate adenocarcinoma (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (67)
Shotgun proteomics (35)
Affinity purification coupled with mass spectrometry proteomics (10)
Top-down proteomics (9)
Bottom-up proteomics (6)
Data-dependent acquisition (5)
Mass spectrometry (3)
Mass spectrometry assay (2)
Gel-based experiment (2)
SWATH MS (2)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SRM/MRM (1)

Instrument Platform

Illumina NovaSeq 6000 (2)
Illumina HiSeq 2000 (2)
Q Exactive (2)
Liquid Chromatography MS - negative - hilic (2)
Element AVITI (1)
PCR machine; AMPure XP beads; TruSeq Stranded mRNA stranded prep. kit (1)
PCR machine; Superscript II polymerase Kit (Invitrogen); PCR machine; AMPure XP beads; TruSeq stranded mRNA sample prep kit.; TruSeq Stranded mRNA stranded prep. kit (1)
Centrifuge 5424R (Eppendorf); miRNeasy Mini Kit (Qiagen); TURBO^TM DNase (Ambion); Bioanalyser (Agilent) (1)
Centrifuge 5424R (Eppendorf); RNAprotect Bacteria Reagent (Qiagen); Cell culture dish (Nunc) (1)
Centrifuge 5424R (Eppendorf); RNAprotect Bacteria Reagent (Qiagen) (1)
PCR machine; MICROBExpress kit (Ambion); TruSeq Stranded mRNA stranded prep. kit (1)
PCR machine; AMPure XP beads; TruSeq stranded mRNA sample prep. kit. (1)
Illumina Genome Analyzer IIx (1)
NA (1)
ACQUITY UPLC H-Class (1)
TripleTOF 5600 (1)
Exactive Plus (1)
LTQ FT (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion (1)
Orbitrap Fusion Lumos (1)
TimsTOF (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2026 (15)
2024 (15)
2015 (9)
2025 (9)
2012 (8)
2021 (8)
2014 (7)
2019 (7)
2023 (7)
2022 (7)
2011 (6)
2020 (6)
2013 (5)
2016 (4)
2009 (4)
2008 (4)
2018 (4)
2017 (3)

CHEBI ID

CHEBI:15354 (2)
CHEBI:15422 (2)
CHEBI:15428 (2)
CHEBI:15698 (2)
CHEBI:16113 (2)
CHEBI:16238 (2)
CHEBI:16450 (2)
CHEBI:16732 (2)
CHEBI:16919 (2)
CHEBI:17050 (2)
CHEBI:17562 (2)
CHEBI:18107 (2)
CHEBI:18132 (2)
CHEBI:10072 (1)
CHEBI:113542 (1)
CHEBI:131536 (1)
CHEBI:131540 (1)
CHEBI:132002 (1)
CHEBI:132004 (1)
CHEBI:132032 (1)
CHEBI:132033 (1)
CHEBI:132034 (1)
CHEBI:132035 (1)
CHEBI:132036 (1)
CHEBI:132037 (1)
CHEBI:132038 (1)
CHEBI:132039 (1)
CHEBI:132223 (1)
CHEBI:132689 (1)
CHEBI:132780 (1)

Metabolite Name

2'-deoxycytidine (2)
2'-deoxyuridine (2)
ATP (2)
CDP-ethanolamine (2)
Choline (2)
Creatine (2)
Cytidine (2)
FAD (2)
Glycine (2)
Phosphocholine (2)
Xanthosine (2)
(2S)-2-isopropylmalic acid (1)
(3S)-3-hydroxy-3-methylglutaryl-CoA (1)
(R)-3-hydroxybutyrylcarnitine (1)
(R)-pantothenic acid (1)
(S)-dihydroorotic acid (1)
(S)-lactic acid (1)
(S)-malic acid (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2) (1)
1-(1-enyl-palmitoyl)-2-palmitoleoyl-GPC (P-16:0/16:1) (1)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0) (1)
1-(1-enyl-palmitoyl)-GPE (P-16:0) (1)
1-(1-enyl-stearoyl)-GPE (P-18:0) (1)
1-arachidonoyl-GPI (20:4) (1)
1-methyladenosine (1)
1-methylnicotinamide (1)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (1)
1-oleoyl-GPI (18:1) (1)
1-palmitoyl-2-docosahexaenoyl-GPE (16:0/22:6) (1)
1-palmitoyl-2-oleoyl-GPC (16:0/18:1) (1)

Study type

Transcription profiling by array (34)
RNA-seq of coding RNA (5)
Comparative genomic hybridization by array (2)
ChIP-seq (2)
ChIP-chip by tiling array (1)
Transcription profiling by RT-PCR (1)
ATAC-seq (1)
Proteomic profiling by array (1)
CUT&RUN (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (496)
2024 (469)
2022 (440)
2021 (430)
2023 (401)
2020 (346)
2019 (230)
2018 (175)
2017 (167)
2016 (124)
2015 (108)
2026 (94)
2014 (59)
2013 (48)
2012 (45)
2011 (30)
2010 (30)
2009 (19)
2008 (17)
2006 (7)
2007 (6)
2005 (5)
2004 (3)
2000 (2)
2002 (1)
1999 (1)

Lab affiliation

IBS, KAIST (4)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (3)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (2)
Korea Brain Research Institute, Daegu, 41068, Korea (2)
Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP) (2)
Molecular Biosciences and the Center for Systems and Synthetic Biology, The University of Texas at Austin, Austin, TX USA (2)
1 Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
1. Bioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Göttingen, Germany 2. Bioanalytics, University Medical Center, Robert-Koch-Straße 40, 37075 Göttingen, Germany (1)
1. Quantitative Biosciences Institute (QBI), University of California, San Francisco, San Francisco, CA, USA. 2. Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, CA, USA. (1)
2Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST) (1)
Assistant Professor of Neurology Institute for Cell Engineering Johns Hopkins University School of Medicine (1)
Associate Professor, Department of Neurology, Yale University School of Medicine (1)
Ben May Department for Cancer Research, The University of Chicago (1)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada (1)
Cedars-Sinai Medical Center (1)
Center for Bioanalysis, Division of Chemical and Medical Metrology, Korea Research Institute of Standards and Science, Daejeon 34113, Republic of Korea (1)
Chung-Ang University (1)
DGIST, Department of new biology, Q-Bio laboratory (1)
Department of Applied Chemistry, Kyung Hee University, Yongin-si, Gyeonggi-do 446-701, South Korea (1)
Department of Biological Sciences, College of Natural Sciences, Seoul National University, Seoul, 08826, Republic of Korea (1)
Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST) (1)
Department of Biotechnology, College of Life Science and Biotechnology, Korea University, Seoul, Republic of Korea (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) (1)
Department of Chemistry, Korea University (1)
Department of Life Sciences, Korea University, Seoul 02841, Korea (1)
Department of Life Sciences, Korea University, Seoul 02841, Republic of Korea (1)
Department of Life Sciences, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea (1)
Department of Neurology, Yale University, New Haven, CT, USA (1)

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Illumina mRNA-Seq of control and hnRNP H knockdown in 293T cells

Pre-mRNA splicing is regulated through combinatorial activity of RNA motifs including splice sites and splicing regulatory elements (SREs). Here, we show that the activity of a major class of mammalian SREs is highly sensitive to the strength of the adjacent 5' splice site (5'ss) sequence, and that...

ORGANISM(S): Homo sapiens

2009-09-12 | E-GEOD-16642 | biostudies-arrayexpress

Chip-chip from C-33 cells expressing FLAG-HPV1 E2 with FLAG-HPV1 E2

HPV1 E2 binds with Brd4 to host mitotic chromosomes. To identify the targets, chromatin was prepared from mitotic C-33 cells expressing HPV1 E2, and analyzed by ChIP-chip analysis for binding to a portion of the human genome. E2 and Brd4 bind to active promoters in interphase C-33 cells (Jang et al....

ORGANISM(S): Homo sapiens

2014-04-14 | E-GEOD-52312 | biostudies-arrayexpress

Breathable, large-area epidermal electronic systems for recording electromyographic activity during operant conditioning of H-reflex.

Not available

S-EPMC7484316 | biostudies-literature

Interprotomer Communication and Functional Asymmetry in H/ACA snoRNPs.

Not available

S-EPMC12157440 | biostudies-literature

Dried SARS-CoV-2 virus maintains infectivity to Vero E6 cells for up to 48 h.

Not available

S-EPMC7583588 | biostudies-literature

Catalytic diastereo- and enantioselective additions of versatile allyl groups to N-H ketimines.