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ProteomicsLambert_TBX2_characterization_HEK293_P82_VS18
This set of submissions contains the mass spectrometry files by Jean-Philippe Lambert et al. that describes the functional characterization of TBX2. AP-MS and BioID experiments were performed from Flp-In T-REx HEK293 cells and MS files were acquired on 5600 TripleTOF mass spectrometers. Different M...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-12-17 | MSV000086613 | MassIVE
ProteomicsYang_NuA4_TIP60_structural_features
This submission contains the mass spectrometry files for the manuscript by Zhenlin Yang et al. that describes the unique structural features of the NuA4/TIP60 acetyltransferase and chromatin remodeling complex. MS experiments were performed from TAP purified complexes from K562 cells and MS files we...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-11-02 | MSV000093280 | MassIVE
ProteomicsProfiling ZO-1 interactome in endothelial cells
ZO-1 immunoprecipitation samples from BAECs, treated or not with VEGF, were analyzed using LC-MS/MS.
ORGANISM(S): Bos taurus (Bovine) 
2024-05-22 | PXD029332 | Pride
Zo-1 Proteomics Endothelial cells 
TranscriptomicsExpression and CGHarray profiling of Hepatosplenic T-cell Lymphomas (10 tumor samples)
A Cartes dIdentite des Tumeurs (CIT) project from the french Ligue Nationale Contre le Cancer (http://cit.ligue-cancer.net) | Affymetrix HG-U133 Plus 2.0 : 10 HSTL samples including biopsies (n=6), sorted tumor cells (n=3), cell line (n=1) | Agilent SurePrint G3 Human CGH Microarray 4x180K Arrays ...
ORGANISM(S): Homo sapiens 
2011-09-30 | E-MTAB-638 | biostudies-arrayexpress
ProteomicsProximity-dependent proteomics identifies PARD3 scaffold protein as a novel effector in EPH receptor signaling - Part 2
This submission contains the mass spectrometry files for the manuscript by Sara L. Banerjee et al. that describes identification of new downstream effector proteins for EPH receptors (EPHRs). To unravel EPHR-associated signaling complexes under native conditions, we applied a mass spectrometry (MS)-...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2022-03-31 | MSV000089185 | MassIVE
ProteomicsProximity-dependent proteomics identifies PARD3 scaffold protein as a novel effector in EPH receptor signaling
This submission contains the mass spectrometry files for the manuscript by Sara L. Banerjee et al. that describes identification of new downstream effector proteins for EPH receptors (EPHRs). To unravel EPHR-associated signaling complexes under native conditions, we applied a mass spectrometry (MS)-...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000086054 | MassIVE
TranscriptomicsThree-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression
The development of the human malaria parasite Plasmodium falciparum is controlled by coordinated changes in gene expression throughout its complex life cycle, but the corresponding regulatory mechanisms are incompletely understood. To study the relation between genome architecture and gene regulatio...
ORGANISM(S): Plasmodium falciparum 3D7 
2014-01-06 | E-GEOD-50199 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human invasive and non-invasive non-functioning pituitary adenomas
Context : Non Functioning Pituitary Adenomas (NFPAs), although typically benign, may be locally invasive. Few datas are currently available related to the molecular process of invasion in sporadic pituitary adenomas. Markers of invasiveness, important for helping the clinician in the therapeutic s...
ORGANISM(S): Homo sapiens 
2010-03-18 | E-TABM-899 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human umbilical vein endothelial cells (HUVECs) transduced with pMLV-MCS or pMLV-THAP1 retroviral expression vectors
Goal of the experiment : Retroviral-mediated gene transfer of the THAP-zinc finger protein THAP1 inhibits endothelial cell proliferation through coordinated repression of critical cell cycle regulators and pRB-E2F target genes. Experimental design: To gain insight into the effects of THAP1 on endo...
ORGANISM(S): Homo sapiens 
2006-09-11 | E-TABM-24 | biostudies-arrayexpress
TranscriptomicsComparative genomic hybridization of human nasal NK/T-cell Lymphoma (8 tumor samples, 2 cell lines)
A ﾑCartes dﾒIdentite des Tumeursﾒ (CIT) project from the french Ligue Nationale Contre le Cancer (http://cit.ligue-cancer.net ) | Human genome-wide CIT-aCGH-V6-4.4K : 8 NKTCL biopsies, 2 NKTCL cell lines. Biopsies and cell lines of NK/T-cell lymphoma, nasal-type (NKTCL) were subject to combine...
ORGANISM(S): Homo sapiens 
2009-12-31 | E-TABM-791 | biostudies-arrayexpress
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