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Proteomicsyagpm3_3
enrichment for specialized purple membrane proteins, cell culture #3; Goo et al., unpublished data.
ORGANISM(S): Halobacterium Nrc-1 (halobacterium) 
2006-12-31 | PAe000189 | PeptideAtlas
TranscriptomicsPTIP-regulated genes in MEF
PPARg and C/EBPa cooperate to control preadipocyte differentiation (adipogenesis). However, the factors that regulate PPARg and C/EBPa expression during adipogenesis remain largely unclear. Here we show PTIP, a protein that associates with histone H3K4 methyltransferases, regulates PPARg and C/EBPa ...
ORGANISM(S): Mus musculus 
2009-05-29 | E-GEOD-16263 | biostudies-arrayexpress
TranscriptomicsSNP data from genomic DNA in patient with rectal cancer
The identification of surrogate single nucleotide polymorphism (SNP) markers that can predict responses to preoperative chemoradiotherapy (CRT) in rectal cancer patients. Genome-wide association studies in clinical populations are theoretically capable of identifying markers that are capable of tumo...
ORGANISM(S): Homo sapiens 
2012-12-31 | E-GEOD-35282 | biostudies-arrayexpress
TranscriptomicsRNA-seq for gastric cancer and normal tissues/cells
We performed RNA-seq experiments to identify differentially expressed intergenic transcripts between gastric cancer and normal tissues/cells. Three primary cell culture samples from gastric cancer tissues, three gastric cancer cell lines and two normal tissue samples were used for the experiments.
ORGANISM(S): Homo sapiens 
2013-10-10 | E-GEOD-41476 | biostudies-arrayexpress
TranscriptomicsGenome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging [mRNA]
Skeletal muscle degenerates progressively, loses mass (sarcopenia) along in years, and leads to reduced physical ability, often causing secondary diseases such as diabetes and obesity. It is known that regulation of gene expression by microRNAs is a key event in muscle development and disease. To un...
ORGANISM(S): Mus musculus 
2014-08-08 | E-GEOD-55163 | biostudies-arrayexpress
TranscriptomicsGenome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Mus musculus 
2014-08-08 | E-GEOD-55165 | biostudies-arrayexpress
TranscriptomicsGenome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging [miRNA]
Skeletal muscle degenerates progressively, loses mass (sarcopenia) along in years, and leads to reduced physical ability, often causing secondary diseases such as diabetes and obesity. It is known that regulation of gene expression by microRNAs is a key event in muscle development and disease. To un...
ORGANISM(S): Mus musculus 
2014-08-08 | E-GEOD-55164 | biostudies-arrayexpress
TranscriptomicsIdentification of time-dependent biomarkers and effects of exposure to volatile organic compounds using high-throughput analysis (expression)
In this study, we examined the effects of VOCs exposure in humans on gene expression using microarray analysis. We recruited participants who had short-term exposure, long-term exposure, or no exposure. We then analyzed changes in gene expression in blood samples from these participants. A total of ...
ORGANISM(S): Homo sapiens 
2015-05-15 | E-GEOD-68906 | biostudies-arrayexpress
TranscriptomicsIdentification of time-dependent biomarkers and effects of exposure to volatile organic compounds using high-throughput analysis (methylation)
Methylation of DNA is one of the common epigenetic signaling tools that cells use to lock the expression of various genes. In this study, we examined the effects of VOCs exposure in humans on methylation using microarray analysis. We recruited participants who had short-term exposure, long-term expo...
ORGANISM(S): Homo sapiens 
2015-05-15 | E-GEOD-68908 | biostudies-arrayexpress
TranscriptomicsInduction of pluripotent stem cells from adult somatic cells by protein-based dedifferentiation
The concept of dedifferentiation of somatic cells into pluripotent stem cells has opened a new era in regenerative medicine. Viral transduction of defined factors has successfully achieved pluripotency derived from somatic cells. However, during the generation process of induced pluripotent stem (iP...
ORGANISM(S): Mus musculus 
2008-12-01 | E-GEOD-13770 | biostudies-arrayexpress
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