John Peter P - OmicsDI

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Genomics (230)
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Organisms

Homo sapiens (292)
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cellular organisms (1)
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Disease

Acute myeloid leukemia (2)
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Illumina 15K (8)
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Instrument (1)
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Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2012 (25)
2011 (16)
2013 (15)
2008 (15)
2015 (14)
2010 (12)
2014 (10)
2022 (9)
2016 (9)
2009 (7)
2021 (6)
2023 (5)
2007 (4)
2020 (3)
2006 (3)
2024 (2)
2025 (1)
2005 (1)
2004 (1)
2002 (1)
2026 (1)
2019 (1)

UNIPROT ID/AC

Q9LQT8 (1)
Q9MAA7 (1)

CHEBI ID

CHEBI:15354 (2)
CHEBI:15428 (2)
CHEBI:15729 (2)
CHEBI:15741 (2)
CHEBI:15891 (2)
CHEBI:15361 (1)
CHEBI:15422 (1)
CHEBI:15846 (1)
CHEBI:16027 (1)
CHEBI:16526 (1)
CHEBI:16761 (1)
CHEBI:16908 (1)
CHEBI:16919 (1)
CHEBI:17138 (1)
CHEBI:17234 (1)
CHEBI:17287 (1)
CHEBI:18021 (1)
CHEBI:18237 (1)
CHEBI:26689 (1)
CHEBI:28087 (1)
CHEBI:29101 (1)
CHEBI:29590 (1)
CHEBI:29605 (1)
CHEBI:30088 (1)
CHEBI:32902 (1)
CHEBI:32906 (1)
CHEBI:4170 (1)
CHEBI:422 (1)
CHEBI:44897 (1)
CHEBI:57579 (1)

Metabolite Name

4-Pyridoxic acid (2)
Dopamine (2)
Kynurenic acid (2)
Tryptamine (2)
Tyrosol (2)
(+)-S,S-Ethambutol (1)
(+)-Thioctic acid (1)
(+)-yohimbine (1)
(+/-)-Camphoric acid (1)
(+/-)-Hesperetin (1)
(+/-)-Metanephrine (1)
(-)-Oxycodone (1)
(-)-Oxymorphone (1)
(-)-Shikimic acid (1)
(-)-secoisolariciresinol (1)
(12-Methyl-7-tetraphenyl)methyl hydrogen sulfate (1)
(2E)-3-(3,4-Dimethoxyphenyl)acrylic acid (1)
(2E)-3-(4-Hydroxy-3-methoxyphenyl)-N-(4-oxobutyl)acrylamide (1)
(2E)-3-Methyl-4-(sulfooxy)-2-butenoic acid (1)
(2E)-N-[2-(Dihydroxymethyl)-4-hydroxy-5-methoxyphenyl]-3-(4-hydroxy-3-methoxyphenyl)acrylamide (1)
(2R)-1-{[(2-Aminoethoxy)(hydroxy)phosphoryl]oxy}-3-hydroxy-2-propanyl (6Z,9Z,12Z,15Z)-6,9,12,15-octadecatetraenoate (1)
(2R,3R)-2-(3,4-Dihydroxyphenyl)-5,7-dihydroxy-3,4-dihydro-2H-chromen-3-yl 4-hydroxybenzoate (1)
(2R,3S)-3-Hydroxy-8-methyl-8-azabicyclo[3.2.1]octane-2-carboxylic acid (1)
(2S)-3-(1H-Imidazol-4-yl)-2-({[(3S,4S,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)tetrahydro-2-furanyl]methyl}amino)propanoic acid (non-preferred name) (1)
(2S)-6-Amino-2-[(E)-(hydroxymethylene)amino]hexanimidic acid (1)
(2Z)-(2,6-Dihydroxy-3,4-dimethoxycyclohexylidene)acetonitrile (1)
(3S)-3-{[(2E)-3-Carboxy-2-propenoyl]oxy}-4-(trimethylammonio)butanoate (1)
(3S)-3-{[(2E)-4-Carboxy-2-butenoyl]oxy}-4-(trimethylammonio)butanoate (1)
(3S,4S)-7,12-Dimethyl-3,4-dihydro-3,4-tetraphenediol (1)
(4-Ethoxyphenyl)urea (1)

IsPrivate

False (2)

Modelling Approach

Ordinary differential equation model (2)

Study type

Transcription profiling by array (85)
RNA-seq of coding RNA (9)
ChIP-seq (8)
Unknown experiment type (6)
Methylation profiling by array (6)
Comparative genomic hybridization by array (4)
ChIP-chip by array (3)
Other (2)
Animal - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Genotyping by array (1)
MicroRNA profiling by array (1)

Release Date

2021 (57)
2023 (54)
2022 (48)
2025 (37)
2012 (37)
2020 (36)
2015 (35)
2016 (31)
2011 (29)
2024 (28)
2019 (27)
2018 (26)
2017 (25)
2014 (21)
2013 (20)
2010 (16)
2009 (12)
2008 (10)
2007 (5)
2026 (5)
2006 (3)
2005 (3)
2004 (1)
2002 (1)
2003 (1)

Lab affiliation

Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Parkville, Victoria 3010, Australia. (1)
Francis Crick Institute London. NW1 1AT. United Kingdom (1)
Peter Lasch, Centre for Biological Threats and Special Pathogens, Proteomics and Spectroscopy (ZBS6), Berlin, Germany (1)
School of BioSciences, The University of Melbourne, Victoria, Australia (1)
UMKC School of Medicine Department of Ophthalmology Kansas City, Missouri, USA (1)

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Merkel cell carcinoma: a forty-year experience at the Peter MacCallum Cancer Centre.

Not available

S-EPMC9826569 | biostudies-literature

Interorganelle lipid flux revealed by enzymatic mass tagging in vivo

The distinct activities of cellular organelles are dependent on the proper function of their membranes. Coordinated membrane biogenesis of the different organelles necessitates interorganelle transport of lipids from their site of synthesis to their destination membranes. Several proteins and traffi...

2022-03-22 | MTBLS3415 | MetaboLights

ORP1L mediated PI(4)P signaling at ER-lysosome-mitochondrion three-way contact contributes to mitochondrial division.

Not available

S-EPMC8429648 | biostudies-literature

Transcription profiling of human neuroblastoma cell line IMR-32 overexpressiong SQSTM1 and DPP3 to identify activators for the antioxidant response element

The antioxidant response element (ARE) is a cis-acting regulatory enhancer element found in the 5’ flanking region of many phase II detoxification enzymes. Upregulation of ARE-dependent target genes is known to have neuroprotective effects; yet, the mechanism of activation is largely unknown. By scr...

ORGANISM(S): Homo sapiens

2007-11-01 | E-GEOD-6451 | biostudies-arrayexpress

Functional and Phenotypic Characterisations of Common Syngeneic Tumour Cell Lines as Estrogen Receptor-Positive Breast Cancer Models.

Not available

S-EPMC10053941 | biostudies-literature

The identification of onchocerciasis biomarker candidates directly in human serum and urine

Onchocerca volvulus, the causative agent of onchocerciasis, infects over 20 million people and can cause severe dermatitis and ocular conditions including blindness. Current mass drug administration treatments do not kill female O. volvulus worms, and common diagnostic tests cannot reliably assess t...

ORGANISM(S): Homo Sapiens Onchocerca Volvulus

2022-11-22 | PXD033659 |

Common step-wise interventions improved primary care clinic visits and reduced emergency department discharge failures: a large-scale retrospective observational study.

Not available

S-EPMC6610992 | biostudies-literature

ER-mitochondrial junctions can be bypassed by dominant mutations in the endosomal protein Vps13.

Not available

S-EPMC4576869 | biostudies-literature

Phase 1 Dose-Escalation Study of Pegylated Arginine Deiminase, Cisplatin, and Pemetrexed in Patients With Argininosuccinate Synthetase 1-Deficient Thoracic Cancers.

Not available

S-EPMC6141244 | biostudies-literature

No evidence to support a role for Helicobacter pylori infection and plasminogen binding protein in autoimmune pancreatitis and IgG4-related disease in a UK cohort.