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MetabolomicsSPE-IMS-MS: An automated platform for sub-sixty second surveillance of endogenous metabolites and xenobiotics in biofluids
Characterization of endogenous metabolites and xenobiotics is essential to deconvoluting the genetic and environmental causes of disease. However, surveillance of chemical exposure and disease-related changes in large cohorts requires an analytical platform that offers rapid measurement, high sensit...
2017-02-14 | MTBLS427 | MetaboLights
ProteomicsMoisture Modulates Soil Reservoirs of Active DNA and RNA viruses
Global proteomics analyses to identify viral proteins in the soil microbiome. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
ORGANISM(S): Environmental Samples <bacteria> (ncbitaxon:48479) 
MSV000086144 | MassIVE
MetabolomicsMaHPIC Experiment HuC - Metabolomics of plasma samples from human volunteers infected with Plasmodium vivax
Project Description:
The Malaria Host-Pathogen Interaction Center (MaHPIC) is a transdisciplinary malaria systems biology research program initially supported by an NIH/NIAID contract (HHSN272201200031C, 2012-2017; see http://w...
2018-06-19 | MTBLS665 | MetaboLights
ProteomicsDefining the dynamic regulation of O-GlcNAc proteome in the mouse cortex -- The O-GlcNAcylation of synaptic and trafficking proteins related to neurodegenerative diseases
Mice were i.p. injected Thiamet G (TG) or saline, and mouse brain cortex tissues were analyzed for O-GlcNAc by LC-MS/MS with TMT based quantification. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
MSV000088053 | MassIVE
ProteomicsmHtt tobacco roots proteome, QEHFX
Samples were analyzed using a nanoACQUITY UPLC system (Waters) coupled to a Q-Exactive HF-X high resolution accurate mass tandem mass spectrometer (Thermo) via a nanoelectrospray ionization source. Briefly the sample was first trapped on a Symmetry C18 180 micron x 20 mm trapping column (5 microlite...
ORGANISM(S): Nicotiana Tabacum (ncbitaxon:4097) 
2019-11-07 | MSV000084557 | MassIVE
ProteomicsPLRV co-immunoprecipitation from Solanum tuberosum
Phloem localization of plant viruses is advantageous for acquisition by sap-sucking vectors but hampers host-virus protein interaction studies. In this study, Potato leafroll virus (PLRV)-host protein complexes were isolated from systemically infected potato, a natural host of the virus. Comparing t...
ORGANISM(S): Solanum tuberosum (Potato) 
2016-12-14 | PXD004814 | Pride
Host-pathogen interactions Lc-msms Co-immunoprecipitation Luteoviridae Polerovirus Solanum tuberosum Potato leafroll virus Phloem-limited 
ProteomicsAsian Citrus Psyllid proteomics: CLas(-) whole ACP nymph
‘Candidatus Liberibacter asiaticus’ (CLas), the bacterial pathogen associated with citrus greening disease, is transmitted by Diaphorina citri, the Asian citrus psyllid (ACP). This dataset was obtained from analysis of peptides from CLas(-) nymph ACP samples.
ORGANISM(S): Diaphorina citri (Asian citrus psyllid) 
2017-02-27 | PXD004225 | Pride
Asian citrus psyllid Citrus greening Insect vector Candidatus liberibacter asiaticus Huanglongbing 
ProteomicsAsian citrus psyllid proteomics: CLas(+) whole adult ACP
‘Candidatus Liberibacter asiaticus’ (CLas), the bacterial pathogen associated with citrus greening disease, is transmitted by Diaphorina citri, the Asian citrus psyllid (ACP). This dataset was obtained from analysis of CLas(+) whole adult ACP samples.
ORGANISM(S): Diaphorina citri (Asian citrus psyllid) 
2017-02-27 | PXD004230 | Pride
Asian citrus psyllid Citrus greening Insect vector Candidatus liberibacter asiaticus Huanglongbing 
ProteomicsAsian citrus psyllid proteomics: CLas(-) whole adult ACP
‘Candidatus Liberibacter asiaticus’ (CLas), the bacterial pathogen associated with citrus greening disease, is transmitted by Diaphorina citri, the Asian citrus psyllid (ACP). This dataset was obtained from analysis of CLas(-) whole adult ACP samples.
ORGANISM(S): Diaphorina citri (Asian citrus psyllid) 
2017-02-27 | PXD004454 | Pride
Asian citrus psyllid Citrus greening Diaphorina citri Insect vector Candidatus liberibacter asiaticus Huanglongbing 
ProteomicsAsian citrus psyllid proteomics: CLas(+) whole nymph ACP
‘Candidatus Liberibacter asiaticus’ (CLas), the bacterial pathogen associated with citrus greening disease, is transmitted by Diaphorina citri, the Asian citrus psyllid (ACP). This dataset was obtained from analysis of CLas(+) whole nymph ACP samples.
ORGANISM(S): Diaphorina citri (Asian citrus psyllid) 
2017-02-27 | PXD004229 | Pride
Asian citrus psyllid Citrus greening Insect vector Candidatus liberibacter asiaticus Huanglongbing 
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