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ProteomicsRaw data for the characterization of a Pseudomonas putida malonyl-ACP decarboxylase
Raw data for top down LCMS for detecting modifications on recombinant proteins, and GCMS for fatty acid methyl ester analysis. Sample nomenclature is summarized in the Powerpoint and PDF files. Details of experiments are given in the associated manuscript.
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) 
MSV000090294 | MassIVE
UnknownPatient and Patient Group Engagement in Cancer Clinical Trials: A Stakeholder Charter.
Not available
S-EPMC8167642 | biostudies-literature
TranscriptomicsGenome-wide profiling of follicular lymphoma by array comparative genomic hybridization
The secondary genetic events associated with follicular lymphoma (FL) progression are not well defined. We applied genome-wide BAC array comparative genomic hybridization to 106 diagnostic biopsies of FL to characterize regional genomic imbalances. Using an analytical approach that defined region...
ORGANISM(S): Homo sapiens 
2010-05-25 | E-GEOD-12393 | biostudies-arrayexpress
MetabolomicsTrans-tissue molecular coordination in high-intensity physical activity
High-intensity physical activity has major impacts in different parts of the body. However, the regulatory coordination between different tissues to support the high physical demands is poorly understood. Here we performed a multi-omics analysis of blood plasma, urine and saliva from a group of fire...
2025-07-03 | MTBLS1891 | MetaboLights
ProteomicsThe plastidial Arabidopsis thaliana NFU1 delivers [4Fe-4S] clusters to specific client proteins
Proteins incorporating iron-sulfur (Fe-S) cofactors are required for a plethora of metabolic processes. Their maturation depends on three Fe-S cluster assembly machineries located in the cytosol, mitochondria and chloroplasts. After de novo formation on scaffold proteins, Fe-S centers are loaded on ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2020-07-06 | PXD015295 | Pride
Arabidopsis 
TranscriptomicsCopy number analysis of Hodgkin lymphoma cell lines KM-H2 and L-428
We identified copy number changes associated with fusion transcripts and breakpoints on chromosomes 15 and 16. Data integration with RNAseq data
ORGANISM(S): Homo sapiens 
2010-12-11 | E-GEOD-25989 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiling in primary Diffuse Large B cell Lymphoma (DLBCL) and normal Germinal Center B Cells
Diffuse Large B-Cell Lymphoma (DLBCL) is the most common aggressive form of non-Hodgkin lymphoma with variable biology and clinical behavior. The current classification does not fully explain the biological and clinical heterogeneity of DLBCLs. In this study we carried out genome-wide DNA methylatio...
ORGANISM(S): Homo sapiens 
2014-01-18 | E-GEOD-54200 | biostudies-arrayexpress
Genomicsena-DATASET-SFU-20-06-2017-22:32:50:620-88 - samples
This dataset consists of the exome sequencing data for 30 tumour and germline DNA pairs derived from relapsed/refractory DLBCL.
EGAD00001003395 | EGA
TranscriptomicsPrognostic analysis of mantle cell lymphoma genomes
Mantle cell lymphoma is characterized by a t(11;14) chromosomal translocation; however, it alone is insufficient to result in the disease. A number of secondary genetic alterations have been proposed as essential in MCL pathogenesis. Amongst these, numerous copy number altered regions remain ill-d...
ORGANISM(S): Homo sapiens 
2010-10-01 | E-GEOD-13331 | biostudies-arrayexpress
GenomicsMarra_DLBCL_validation - samples
miRNA-seq Cohort of 140 Formalin Fixed Paraffin Embedded Diffuse Large B-cell Lymphoma Patient Samples
EGAD00001001073 | EGA
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