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TranscriptomicsTranscription profiling of Drosophila pooled Malpighian tubules vs. whole fly
This is an affymetrix array experiment comparing the transcriptome of the Malpighian tubule (or renal tubule) of 7-day adult Oregon R strain Drosophila melanogaster with matched whole fly samples. It is described in:,Wang, J., Kean, L., Yang, J., Allan, A. K., Davies, S. A., Herzyk, P. and Dow, J. A...
ORGANISM(S): Drosophila melanogaster 
2007-07-06 | E-GEOD-1690 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of adult drosophila renal tubule vs whole fly
The experiment was designed to identify genes abundant or enriched in adult Drosophila melanogaster Malpighian (renal) tubule as compared to the whole fly.
ORGANISM(S): Drosophila melanogaster 
2004-06-23 | E-MEXP-127 | biostudies-arrayexpress
MetabolomicsFecal microbiota transplantation plus anti-PD-1 immunotherapy in advanced melanoma: a phase I trial

Fecal microbiota transplantation (FMT) represents a potential strategy to overcome resistance to immune checkpoint inhibitors in patients with refractory melanoma; however, the role of FMT in first-line treatment settings has not been evaluated. We conducted a multicenter phase I trial combining ...

2025-02-27 | MTBLS711 | MetaboLights
GenomicsSingle-cell whole genome sequencing of a bacterial mock community
This dataset holds three runs of our new Atrandi-SPC based single-cell WGS protocol, one for each lysis protocol (R1-R3 in the study)
ORGANISM(S): mixed sample 
2026-05-30 | E-MTAB-15286 | biostudies-arrayexpress
TranscriptomicsSingle-cell whole genome sequencing of bacteria from saliva
This dataset holds three runs of our new Atrandi-SPC based single-cell WGS protocol, applied to human saliva. The files are Bascet-FASTQ-format, i.e. barcodes are part of read names, reads are trimmed, and human DNA has been filtered out
ORGANISM(S): Homo sapiens 
2026-07-31 | E-MTAB-15285 | biostudies-arrayexpress
Genomics
Dysbiosis associated with acute helminth infections in herbivorous youngstock – observations and implications
PRJEB38717 | ENA
Other,MultiomicsChevrette et al 2019 Insect-associated Streptomyces
Paper title: The antimicrobial potential of Streptomyces from insect microbiomes. Author list: Chevrette MG, Carlson CM, Ortega HE, Thomas C, Ananiev GE, Barns KJ, Book AJ, Cagnazzo J, Carlos C, Flanigan W, Grubbs KJ, Horn HA, Hoffmann FM, Klassen JL, Knack JJ, Lewin GR, McDonald BR, Muller L, Melo ...
ORGANISM(S): Pseudonocardia Kitasatospora Streptomyces Gordonia <actinomycete> 
2019-12-18 | MSV000084723 | MassIVE
Metabolomics,MultiomicsGNPS - Chevrette et al 2019 Insect-associated Streptomyces
Paper title: The antimicrobial potential of Streptomyces from insect microbiomes. Author list: Chevrette MG, Carlson CM, Ortega HE, Thomas C, Ananiev GE, Barns KJ, Book AJ, Cagnazzo J, Carlos C, Flanigan W, Grubbs KJ, Horn HA, Hoffmann FM, Klassen JL, Knack JJ, Lewin GR, McDonald BR, Muller L, Melo ...
ORGANISM(S): Kitasatospora (ncbitaxon:2063) Gordonia <actinomycete> (ncbitaxon:2053) Pseudonocardia (ncbitaxon:1847) Streptomyces (ncbitaxon:1883) 
2019-12-18 | MSV000084723 | GNPS
ProteomicsGlobal profiling of acetylation reveals a new family with dual-specific lysine and N-terminal acetyltransferase activity in the plastids of Arabidopsis
Protein acetylation is a universally conserved modification occurring on N-termini (N--acetylation, NTA) and on internal lysines residues (-lysine-acetylation, KA). So far, NTA and KA were known to be supported by distinct families of enzymes (NATs and KATs, respectively), despite most of them sha...
ORGANISM(S): Escherichia Coli 
2020-07-07 | PXD015875 | JPOST Repository
TranscriptomicsMouse, pig, and human atherosclerotic lesions have common and distinct mesenchymal cell populations
The single-cell RNA-seq experiment aims to explore the cell-type composition of right coronary artery plaques to provide an overview of human-like atherosclerosis. The PCSK9 transgenic minipigs were subjected to 15 months of HFHC diet (HFHC group f, n=4; m, n=1). At the time of euthanasia, plaque pa...
ORGANISM(S): Sus scrofa 
2025-08-30 | E-MTAB-15464 | biostudies-arrayexpress
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