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ProteomicsIdentification of WT and mutant OSBPL2 interactors
Pathogenic OSBPL2 mutations led to almost identical truncated proteins, which formed cytoplasmic aggregates, we performed a proteomic analysis to understand the function of mutant OSBPL2 via the identification of its interactome.
ORGANISM(S): Homo sapiens (Human) 
2023-03-10 | PXD021514 | Pride
Proteomics Interactors Mutant protein 
ProteomicsHuman Placenta profilling LTQ-OrbiTrap
Profilling normal human placantal proteomes using LTQ-OrbiTrap
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-06-10 | MSV000083950 | MassIVE
ProteomicsLung cancer and Normal Lung Tissue LC-MS/MS
The Chromosome-centric Human Proteome Project (C-HPP) was recently initiated as an international collaborative effort. Our team adopted chromosome 9 (Chr 9) and performed a bioinformatics and proteogenomic analysis to catalog Chr 9-encoded proteins from normal tissues, lung cancer cell lines and lun...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-06-12 | MSV000083969 | MassIVE
ProteomicsnextPP for chromosome-based proteomic research using neXtProt and GENCODE databases
In this study, we introduce a streamlined pipeline using customized and concatenated GENCODE and neXtProt databases with controlled false discovery rate (FDR) for finding GENCODE ASVs and missing proteins while mapping onto single amino acid variants (SAAVs) from Hippocampal dataset.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-07-25 | MSV000081385 | MassIVE
UnknownDetection of differentially methylated CpGs between tumour and adjacent benign cells in diagnostic prostate cancer samples.
Differentially methylated CpG sites (dmCpGs) that distinguish prostate tumour from adjacent benign tissue could aid in the diagnosis and prognosis of prostate cancer. Previously, the identification of such dmCpGs has only been undertaken in radical prostatectomy (RP) samples and not primary diagnost...
S-EPMC11297152 | biostudies-literature
MetabolomicsGNPS - MassIVE data submission of Taraxacum MSe data
LC-MSe data of 13 Taraxacum species (whole plant body) extracts for analyzing their chemical diversity, including 8 QC samples (mixture of all the samples in same conc.)
ORGANISM(S): Taraxacum Platycarpum (ncbitaxon:170727) Taraxacum Officinale (ncbitaxon:50225) Taraxacum Ohwianum Taraxacum Coreanum (ncbitaxon:1041103) Taraxacum Mongolicum (ncbitaxon:90037) 
2020-02-06 | MSV000084931 | GNPS
UnknownMapping the human genetic architecture of COVID-19.
The genetic make-up of an individual contributes to the susceptibility and response to viral infection. Although environmental, clinical and social factors have a role in the chance of exposure to SARS-CoV-2 and the severity of COVID-191,2, host genetics may also be important. Identifying...
S-EPMC8674144 | biostudies-literature
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