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TranscriptomicsTranscription profiling of Drosophila fly heads treated with CHX, dexamethasone vs. controls
CLK targets from fly heads using the TIM-GAL4; UAS-CLKGR line Experiment Overall Design: Fly heads were stimulated with vehicle + CHX or dexamethasone + CHX
ORGANISM(S): Drosophila melanogaster 
2008-06-15 | E-GEOD-7646 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila S2 cells to identify CLKGR targets
Experiments performed in S2 cells to identify direct CLK targets Experiment Overall Design: Those targets were determined using Drosophilagenome1 and Drosophila 2.0 Affymetrix CHIPS.
ORGANISM(S): Drosophila melanogaster 
2008-06-15 | E-GEOD-7644 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila head from y w strain - timepoints control strain
6 Timepoint microarray from control strain Experiment Overall Design: Fly head microarray from 6 Timepoints using yw strain
ORGANISM(S): Drosophila melanogaster 
2008-06-15 | E-GEOD-7652 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila S2 cells transfected with Clk
S2 cells transfected with pAc-Clk or empty vector Experiment Overall Design: S2 cells transfected with pAc-Clk or empty vector. Cells were transfected and RNA collected after 48hs
ORGANISM(S): Drosophila melanogaster 
2008-06-15 | E-GEOD-7653 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila heads from 5073 strain at multiple time points
6 Timepoints from 5073 strain Experiment Overall Design: Fly head microarray from 6 Timepoints using 5073 strain
ORGANISM(S): Drosophila melanogaster 
2008-06-15 | E-GEOD-7651 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila Clockwork Orange rveals it is a transcriptional repressor and a new Drosophila circadian pacemaker component (GEO super series)
This SuperSeries is composed of the following subset Series:; GSE7644: CLKGR in S2 cells; GSE7646: CLK targets from fly heads; GSE7651: Timepoints 5073 strain; GSE7652: Timepoints Control strain; GSE7653: S2 cells transfected with Clk Experiment Overall Design: Refer to individual Series
ORGANISM(S): Drosophila melanogaster 
2008-06-16 | E-GEOD-8391 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila wild type vs TIM-MJD mutants expressing a polyglutamine-expanded neurotoxic protein in the major timeless (tim)-expressing cells after 3 days of training in light-dark (LD) conditions
WT flies or flies of the strain Tim-gal4; UAS-MJD78Q. All samples were collected at ZT16 after 3 days of training in LD conditions.
ORGANISM(S): Drosophila melanogaster 
2008-06-12 | E-GEOD-2422 | biostudies-arrayexpress
TranscriptomicsDetection of circRNA in Drosophila Fly heads and S2 cells using RNA-seq with or without RNaseR tretment
We determined circRNA abundance in fly Heads and S2 cells by generating and analyzing high-throughput RNA-sequencing libraries prepared from rRNA-depleted RNA. In order to determine whether the observed sequencing reads are due to bona fide circRNAs, we pre-treated the RNA with RNAse-R before the rR...
ORGANISM(S): Drosophila melanogaster 
2014-10-14 | E-GEOD-55872 | biostudies-arrayexpress
TranscriptomicsAGO 1 IMMUNOPRECIPITATION MICROARRAYS
Little is known about the contribution of translational control to circadian rhythms. To address this issue and in particular translational control by microRNAs (miRNAs), we knocked down the miRNA biogenesis pathway in Drosophila circadian tissues. In combination with an increase in circadian-media...
ORGANISM(S): Drosophila melanogaster 
2009-08-31 | E-GEOD-17627 | biostudies-arrayexpress
Transcriptomics3' RNA-seq of fly expressing cabut RNAi after exposure to different levels of sucrose
Control (+/cbtE1-UAS-cbt RNAi) or cabut RNAi flies (Tim-gal4, UAS-cbt RNAi) were starved for 16 hours and then exposed to food containing different concentrations of sucrose: 0, 25, 50 and 100 % for 18 hours. Fly heads were collected, RNA was extracted and RNA-seq libraries were prepared as prev...
ORGANISM(S): Drosophila melanogaster 
2015-05-08 | E-GEOD-58854 | biostudies-arrayexpress
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