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TranscriptomicsSingle-cell RNA-seq of tumor-infiltrating lymphocytes in metastatic uveal melanoma
Metastatic uveal melanoma generally responds poorly to immunotherapy. The aim here was to sequence tumor-infiltrating lymphocytes from uveal melanoma metastases to study their phenotypes and T-cell receptor (TCR) clonotypes. We performed paired single-cell transcriptome and TCR sequencing using the ...
ORGANISM(S): Homo sapiens 
2020-03-16 | E-MTAB-8846 | biostudies-arrayexpress
TranscriptomicsTranscriptomic characterization of the human cell cycle in individual unsynchronized cells
Here, we profiled transcription across the cell cycle in single human myxoid liposarcoma cells, without prior synchronization. Flourescence-activated cell sorting was used to infer G1, S or G2/M cell cycle stages after staining cells for DNA content. Single-cell RNA-sequencing was performed accordin...
ORGANISM(S): Homo sapiens 
2017-11-09 | E-MTAB-6142 | biostudies-arrayexpress
ProteomicsSOD cambium Proteomics Data - OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants
Reactive oxygen species (ROS) are involved in the regulation of diverse physiological processes in plants, including various biotic and abiotic stress responses. Thus, oxidative stress tolerance mechanisms in plants are complex, and diverse responses at multiple levels need to be characterized in or...
ORGANISM(S): Populus tremula x Populus tremuloides 
2014-04-17 | PXD000532 | Pride
Data integration Cambium Superoxide dismutase Onpls 
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