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UnknownProtein Kinase R Is Constitutively Expressed in the Human Pancreas.
Not available
S-EPMC6354319 | biostudies-literature
ProteomicsShotgun proteomics of Roseburia grown on human milk oligosaccharides and of Roseburia grown on mucin in co-culture with Akkermansia muciniphilia.
The main objective of the present proteomic study is to identify the metabolic response, in particular theglycan uptake and degradation machinery, conferring members of Roseburia growth on HMOs and/or onrelated O-glycans. Accordingly, the proteomes of R. hominis and R. inulinivorans bothgrown on hum...
ORGANISM(S): Roseburia inulinivorans DSM 16841 Akkermansia muciniphila ATCC BAA-835 Roseburia hominis A2-183 
2020-07-06 | PXD015045 | Pride
Lc-msms Metaproteomics Roseburia Proteomics Hmos Mucin Akkermansia muciniphilia O-glycans 
UnknownPhyloTempo: A Set of R Scripts for Assessing and Visualizing Temporal Clustering in Genealogies Inferred from Serially Sampled Viral Sequences.
Not available
S-EPMC3382462 | biostudies-literature
ProteomicsStreptococcus pneumoniae biomarker identification by surface shaving and bottom-up mass spectrometry-based proteomics
In this study, genomics- and proteomics-based approaches were used for the identification of Streptococcus pneumoniae potential biomarkers for diagnostics and prospective targets for treatment. Through a Pan-genome analyses 11 strains from the CCUG demonstrating genetic variability within the speci...
ORGANISM(S): Streptococcus pneumoniae Bacteria 
2025-12-15 | PXD063486 | Pride
Proteomics Surface-shaving Bottom-up mass spectrometry Lpi Biomarkers Streptococcus pneumoniae 
ProteomicsMSLibrarian: Optimized predicted spectral libraries for DIA proteomics
Data-independent mass spectrometry is the method of choice for deep, consistent and accurate single-shot profiling in bottom-up proteomics. While classic workflows required auxiliary DDA-MS analysis of subject samples to derive prior knowledge spectral libraries for targeted quantification from DIA-...
ORGANISM(S): Mus musculus (Mouse) Saccharomyces cerevisiae (Baker's yeast) 
2022-01-17 | PXD028901 | Pride
Q-exactive Predicted spectral library Dia Hf-x Lfq bench 
UnknownCharacterisation of (R)-2-(2-Fluorobiphenyl-4-yl)-N-(3-Methylpyridin-2-yl)Propanamide as a Dual Fatty Acid Amide Hydrolase: Cyclooxygenase Inhibitor.
Not available
S-EPMC4583449 | biostudies-literature
ProteomicsProteomic study of Staphylococcus haemolyticus after the host-microbe co-colonisation
In this study, the adhesive and biofilm forming properties of ten clinical and ten commensal S. haemolyticus isolates were examined using standard adhesion and biofilm assays, in addition we selected one clinical S. haemolyticus isolate for bacterial surface shaving. The surface shaving approach was...
ORGANISM(S): Staphylococcus haemolyticus 
2020-05-26 | PXD014450 | Pride
Tandem mass tag Surface shaving Tmt Staphylococcus haemolyticus Q exactive hf 
TranscriptomicsTGFbeta signalling in fibroblasts.
Murine embryonic fibroblasts, wild type or Alk5 knock outs, stimulated and unstimulated with TGFbeta.
ORGANISM(S): Mus musculus 
2010-06-10 | E-GEOD-1742 | biostudies-arrayexpress
TranscriptomicsOverexpression of cSki in hematopoietic stem and progenitor cells
Human cSki was overexpressed using MIGR1 retrovirus in sorted murine Lin-c-Kit+Sca-1+ cells. Cells were infected and cultured for 2 days after infection prior to isolation of GFP+ve cells and microarray. GFP+ve MIGR1 and cSKI cells were compared. Each sample represents an independent infection with ...
ORGANISM(S): Mus musculus 
2014-01-21 | E-GEOD-39457 | biostudies-arrayexpress
UnknownAltered somatosensory processing in adult attention deficit hyperactivity disorder.
Not available
S-EPMC11323665 | biostudies-literature
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