Kasper S S - OmicsDI

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Unknown (442)
Transcriptomics (35)
Genomics (34)
Proteomics (21)
Metabolomics (4)
Other (1)

Organisms

Homo sapiens (42)
Mus musculus (29)
Drosophila melanogaster (5)
Populus tremula x Populus alba (2)
Rattus norvegicus (2)
Phaeodactylum tricornutum (1)
Caenorhabditis elegans (1)
Saccharomyces cerevisiae (1)
Escherichia coli (1)
Lodderomyces parapsilosis (1)
Planoprotostelium fungivorum (1)

Organisms

gut metagenome (1)

Repository

biostudies-arrayexpress (41)
EGA (26)
pride (18)
MassIVE (3)
MetaboLights (3)
ENA (2)
GNPS (1)
GPMDB (1)

Tissue

Cell culture (3)
Brain (2)
Hepatocyte (2)
Liver (2)
Early embryonic cell (1)
Epithelial cell (1)
HUVEC cell (1)
Permanent cell line cell (1)

Disease

Not Available (1)
Disease free (1)
Hepatic steatosis (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (9)
MSE (6)
Mass spectrometry (2)
Data-independent acquisition (2)
ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000, GenomeWideSNP_6-BirdseedV2 (1)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Bottom-up proteomics (1)

Instrument Platform

Illumina HiSeq 2000 (3)
Q Exactive (3)
NextSeq 500 (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
FACSAria (BD) (1)
Illumina MiSeq (1)
Illumina HiSeq 2500 (1)
Instrument (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF-X (1)
TripleTOF 5600+ (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2015 (8)
2014 (8)
2021 (6)
2013 (6)
2008 (4)
2019 (4)
2025 (3)
2022 (3)
2026 (2)
2023 (2)
2018 (2)
2016 (2)
2010 (2)
2009 (2)
2007 (2)
2017 (2)
2024 (2)
2020 (2)
2011 (1)
2005 (1)

CHEBI ID

CHEBI:10565 (1)
CHEBI:136772 (1)
CHEBI:137481 (1)
CHEBI:137501 (1)
CHEBI:137515 (1)
CHEBI:137977 (1)
CHEBI:139241 (1)
CHEBI:139294 (1)
CHEBI:153572 (1)
CHEBI:15927 (1)
CHEBI:15929 (1)
CHEBI:16065 (1)
CHEBI:16220 (1)
CHEBI:16235 (1)
CHEBI:16323 (1)
CHEBI:16464 (1)
CHEBI:16673 (1)
CHEBI:16741 (1)
CHEBI:167531 (1)
CHEBI:167538 (1)
CHEBI:167540 (1)
CHEBI:16899 (1)
CHEBI:16914 (1)
CHEBI:17381 (1)
CHEBI:17488 (1)
CHEBI:176098 (1)
CHEBI:17814 (1)
CHEBI:17964 (1)
CHEBI:18026 (1)
CHEBI:18305 (1)

Metabolite Name

(S)-2-acetolactate (1)
1-O-(4-Coumaroyl)-beta-D-glucose (1)
11-hydoxyundecanamide (1)
2,5-dihydroxybenzoic acid 5-O-beta-D-glucoside (1)
2-(6 methylthio)hexylmalate (1)
2-(6'-methylthio)hexylmalate (1)
2-Aminoadipic acid (1)
2-Ketovaline (1)
2-O-acetylsalicin (1)
3-Dihydroxybenzoic acid (1)
3-dihydroxybenzoic acid (1)
4-Guanidinobutanal (1)
4-Guanidinobutanoate (1)
4-Hydroxybenzoate-O-glucoside (1)
4-hydroxysphinganine (1)
5'-deoxyadenosine (1)
5-Hydroxyectoine (1)
5-METHYLTHIOADENOSINE (1)
5-hydroxyconiferyl alcohol derivative (1)
6-Anhydro-beta-D-glucose (1)
7-O-Methylnaringenin-7-furanosyl-(1-6)-glucopyranoside (1)
N-acetyl-L-glutamate 5-semialdehyde (1)
N-hydroxy-L-tryptophan (1)
S-adenosyl-L-homocysteine (1)
Acetylprolin (1)
Adenosin (1)
Adenosine monophosphate (1)
Asparagine (1)
Caffeic acid 3-glucoside (1)
Carnitine (1)

First Public Date

2025 (2)

Study type

Transcription profiling by array (22)
RNA-seq of coding RNA (6)
RNA-seq of coding RNA from single cells (3)
Methylation profiling by high throughput sequencing (3)
Plant - High-throughput sequencing (2)
ChIP-seq (2)
RNA-seq of non coding RNA (2)
DNA-seq (1)

Release Date

2021 (49)
2025 (49)
2023 (45)
2020 (44)
2022 (41)
2015 (35)
2014 (33)
2024 (31)
2019 (28)
2016 (20)
2018 (19)
2013 (18)
2017 (17)
2012 (12)
2026 (8)
2007 (8)
2011 (6)
2010 (6)
2009 (5)
2008 (4)
2005 (4)
2006 (1)

Lab affiliation

Protein Analysis Group, Department of Pharmacy, University of Copenhagen, Copenhagen, Denmark (3)
Protein Analysis Group, Department of Pharmacy, University of Copenhagen, 2100 Copenhagen O, Denmark (2)
1 Department of Molecular Neurosciences, Center for Brain Research, Medical University of Vienna, Spitalgasse 4, A-1090 Vienna, Austria; 2 Department of Neuroscience, Karolinska Institutet, Retzius väg 8, SE-17177 Stockholm, Sweden (1)
Biozentrum, University of Basel (1)
Dairy Science & Technology, Food Quality & Design group, Wageningen University & Research, Wageningen, The Netherlands (1)
Department of Molecular Neurosciences, Center for Brain 1099 Research, Medical University of Vienna, Vienna, Austria (1)
Department of Pharmacy, University of Copenhagen (1)
Forschungslabor Fetale Programmierung, Klinik und Poliklinik für Kinder- und Jugendmedizin, Uniklinik Köln, Gebäude 44a, Robert-Koch Str. 16, 50931 Köln (1)
Institute of Biotechnology, PO Box 56,00014 University of Helsinki, Finland Karolinska Institutet, Department of Cell and Molecular Biology, Tomtebodavägen 16,Biomedicum, SE-171 65 Solna, Sweden (1)
Massachusetts General Hospital, USA (1)
Molecular and Applied Microbiology Leibniz Institute for Natural Product Research and Infection Biology - Hans Knoell Institute Adolf-Reichwein-Str. 23, 07745, Jena, Germany (1)
Protein Analysis Group, Department of Pharmacy, University of Copenhagen (1)
Protein Analysis Group, Department of Pharmacy, University of Copenhagen, Copehagen, Denmark (1)
Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany (1)
Yale Cardiovascular Research Center, Department of Internal Medicine, Section of Cardiology, Yale University School of Medicine, New Haven, CT 06511, USA (1)

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H₂ S Dosimetry by CuO: Towards Stable Sensors by Unravelling the Underlying Solid-State Chemistry.

Not available

S-EPMC9300071 | biostudies-literature

Sphericity and symmetry breaking in the formation of Frank-Kasper phases from one component materials.

Not available

S-EPMC4273414 | biostudies-literature

Tetrahedral Liquid-Crystalline Networks: An A15-Like Frank-Kasper Phase Based on Rod-Packing.

Not available

S-EPMC9321821 | biostudies-literature

Topological dual and extended relations between networks of clathrate hydrates and Frank-Kasper phases.

Not available

S-EPMC9898525 | biostudies-literature

Streptolysin S is required for Streptococcus pyogenes nasopharyngeal and skin infection in HLA-transgenic mice.

Not available

S-EPMC10950238 | biostudies-literature

Annotating Low Abundance and Transient RNAs in Yeast using Ultra High-throughput Sequencing

Annotating Low Abundance and Transient RNAs in Yeast using Tiling Microarrays and Ultra High-throughput Sequencing Reveals New Transcripts that are not Conserved Across Closely Related Yeast Species A complete description of the transcriptome of an organism is crucial for a comprehensive understand...

ORGANISM(S): Saccharomyces cerevisiae

2008-12-18 | E-GEOD-11801 | biostudies-arrayexpress

Protein abundance comparison of human cells infected with Shigella flexneri over different time periods

The enteroinvasive bacterium Shigella flexneri invades the intestinal epithelium of humans. During infection, several injected effector proteins promote bacterial internalization, and interfere with multiple host cell responses. To obtain a systems-level overview of host signaling during infection, ...

ORGANISM(S): Homo sapiens (Human)

2017-01-23 | PXD000219 | Pride

Alpha-1-antitrypsin as novel substrate for S. aureus' Spl proteases - implications for virulence.

Not available

S-EPMC11611844 | biostudies-literature

A controlled-release oral opioid supports S. aureus survival in injection drug preparation equipment and may increase bacteremia and endocarditis risk.

Not available

S-EPMC6688832 | biostudies-literature

Translating the immediate effects of S-Ketamine using hippocampal subfield analysis in healthy subjects-results of a randomized controlled trial.

Not available

S-EPMC8016970 | biostudies-literature

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537 Results

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