Keller F F - OmicsDI

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Unknown (1504)
Proteomics (133)
Transcriptomics (45)
Genomics (15)
Metabolomics (8)

Organisms

Homo sapiens (110)
Mus musculus (26)
Saccharomyces cerevisiae (5)
Solenopsis invicta (4)
Arabidopsis thaliana (4)
Sus scrofa domesticus (3)
Zea mays (2)
Caenorhabditis elegans (2)
Anopheles gambiae (2)
Escherichia coli (2)
Klebsiella pneumoniae (2)
Klebsiella variicola (2)
Staphylococcus aureus (2)
Streptococcus pyogenes (2)
Ostreococcus tauri (1)
Aspergillus fumigatus (1)
Ovis aries (1)
Triticum aestivum (1)
Rattus norvegicus (1)
Sus scrofa (1)
Phytophthora nicotianae (1)
Phytophthora nicotianae INRA-310 (1)
1720309 (1)
Anaerobutyricum hallii DSM 3353 (1)
Aspergillus nidulans FGSC A4 (1)
Bacteria (1)
Bacteroides fragilis NCTC 9343 (1)
Butyrivibrio fibrisolvens DSM 3071 (1)
Clavibacter nebraskensis NCPPB 2581 (1)
Dictyostelium discoideum (1)

Organisms

Phytophthora nicotianae INRA-310 (1)

Repository

pride (130)
biostudies-arrayexpress (52)
MetaboLights (8)
EGA (6)
MassIVE (2)
geo (1)
PanoramaPublic (1)
ENA (1)

Tissue

Cell culture (32)
Epithelial cell (12)
Permanent cell line cell (7)
B cell (6)
Blood (5)
Heart (4)
Keratinocyte (4)
Blood cell (3)
Bone marrow (3)
Cell suspension culture (3)
Early embryonic cell (3)
Liver (3)
Skin (3)
Brain (2)
Embryonic stem cell (2)
Fibroblast (2)
Kidney (2)
Kidney cell (2)
Leaf (2)
Plant cell (2)
Retina (2)
T cell (2)
Wound fluid (2)
Blood plasma (1)
Blood platelet (1)
Breast (1)
Cell line cell (1)
Colon (1)
Cumulus cell (1)
HEK-293T cell (1)

Disease

Breast cancer (5)
Multiple myeloma (5)
Disease free (3)
Lymphoma (3)
Diabetes mellitus (2)
Wounds and Injuries (2)
Acute leukemia (1)
Basal cell carcinoma (1)
COVID-19 (1)
Chronic myeloid leukemia (1)
Colon cancer (1)
Fanconi anemia complementation group A (1)
Lewy body dementia (1)
Multiple system atrophy (1)
Myocardial ischemia (1)
Neuroblastoma (1)
Oral squamous cell carcinoma (1)
Pancreatic cancer (1)
Pancreatic ductal adenocarcinoma (1)
Parkinson's disease (1)
Peripheral primitive neuroectodermal tumor (1)
Plasmodium falciparum malaria (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (130)
Shotgun proteomics (73)
Affinity purification coupled with mass spectrometry proteomics (24)
Gel-based experiment (14)
Bottom-up proteomics (13)
Data-dependent acquisition (12)
SRM/MRM (12)
SWATH MS (11)
Mass spectrometry (7)
Data-independent acquisition (4)
Top-down proteomics (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Illumina HiSeq 3000 (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography Tandem MS (LC-MS/MS) (2)
Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2500 (1)
LTQ Orbitrap Velos (1)
Q Exactive (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2022 (30)
2021 (23)
2023 (22)
2025 (14)
2020 (11)
2016 (11)
2014 (11)
2024 (11)
2019 (10)
2013 (10)
2026 (10)
2015 (7)
2017 (5)
2018 (4)
2012 (4)
2010 (4)
2011 (3)
2008 (2)
2007 (1)

CHEBI ID

CHEBI:17858 (2)
CHEBI:116314 (1)
CHEBI:135063 (1)
CHEBI:145234 (1)
CHEBI:145573 (1)
CHEBI:15354 (1)
CHEBI:15356 (1)
CHEBI:15444 (1)
CHEBI:157672 (1)
CHEBI:16027 (1)
CHEBI:16038 (1)
CHEBI:16208 (1)
CHEBI:16244 (1)
CHEBI:16337 (1)
CHEBI:16449 (1)
CHEBI:16652 (1)
CHEBI:16761 (1)
CHEBI:17126 (1)
CHEBI:17202 (1)
CHEBI:17239 (1)
CHEBI:17361 (1)
CHEBI:17368 (1)
CHEBI:17517 (1)
CHEBI:17597 (1)
CHEBI:17750 (1)
CHEBI:177535 (1)
CHEBI:181148 (1)
CHEBI:18237 (1)
CHEBI:18303 (1)
CHEBI:185794 (1)

Metabolite Name

Betaine (2)
Choline (2)
Cytidine (2)
Cytosine (2)
1,2,3,4,Tetrahydro-1,5,7-trimethylnapthalene (1)
1,2-Benzoquinone (1)
1,5-dimethyl-1-vinyl-4-hexenyl acetate (1)
1-(9Z-Eicosenoyl)-sn-glycero-3-phosphocholine (1)
1-Oleoyl-sn-glycero-3-phosphocholine (1)
1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (1)
1-Pyrroline (1)
11-Methyltetradecanoylcarnitine (1)
13-methylnonadecanoylcarnitine (1)
1H-Imidazole-4-carboxamide (1)
1H-Pyrazolo[3,4-d]pyrimidin-4-amine (1)
2'-Deoxyguanosine 5'-Monophosphate (1)
2,5-Diamino-2-methylpentanoic acid (1)
2,6 Dimethylheptanoyl carnitine (1)
2,6-Di-tert-butyl-4-hydroxymethylphenol (1)
2-Acetylacteoside (1)
2-Amino-4-methylpyridine (1)
2-Aminopyridine (1)
2-Chloro-1,1-difluoroethylene (1)
2-Ethylpyrazine (1)
2-Furancarboxaldehyde (1)
2-Hexenoylcarnitine (1)
2-Hydroxyhexadecanoylcarnitine (1)
2-Hydroxyphenethylamine (1)
2-Methylpyrrolidine (1)
2-Octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone (1)

First Public Date

2014 (1)

Modification

-17.026549 (1)
-18.010565 (1)
15.994915 (1)
42.010565 (1)
57.021464 (1)
N6 (1)

Study type

Transcription profiling by array (25)
RNA-seq of coding RNA (15)
ChIP-seq (8)
CLIP-seq (1)
Comparative genomic hybridization by array (1)
Other (1)
MicroRNA profiling by array (1)

Release Date

2021 (172)
2022 (159)
2025 (152)
2023 (144)
2020 (143)
2024 (139)
2019 (92)
2018 (85)
2015 (75)
2017 (69)
2016 (56)
2014 (53)
2013 (53)
2012 (34)
2026 (29)
2011 (20)
2010 (20)
2009 (17)
2008 (14)
2007 (8)
2006 (6)
2005 (4)
2002 (4)
2004 (3)
2003 (3)
2000 (1)
1998 (1)

Lab affiliation

Institute of Molecular Systems Biology, ETH Zurich, 8093 Zurich, Switzerland Faculty of Science, University of Zurich, Zurich, Switzerland (8)
Bioplatforms Australia (7)
Novartis Inst. for BioMedical Research (4)
Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland (3)
Department of Biology, Institute of Molecular Systems Biology, ETH Zürich, Zürich, Switzerland Faculty of Science, University of Zürich, Zürich, Switzerland (3)
Department of Biotechnology and Biomedicine, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark (3)
Institute of Biochemistry (3)
CNIC (2)
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090 Vienna, Austria (2)
Charité – Universitätsmedizin Berlin, Department of Biochemistry, 10117 Berlin, Germany; The Francis Crick Institute, Molecular Biology of Metabolism Laboratory, London NW11AT, UK (2)
ETH Zurich, Department of Biology, Institute of Molecular Health Sciences (2)
ETH Zürich Institute of Molecular Systems Biology Otto-Stern-Weg 3 8093 Zürich Switzerland (2)
Eppley Institute for Research in Cancer University of Nebraska Medical Center Omaha, NE 68198, USA (2)
IMSB, ETHZ (2)
1) German Center for Neurodegenerative Diseases (DZNE), 72076 Tübingen, Germany (2) University of Tübingen, Center for Ophthalmology, Institute for Ophthalmic Research, 72074 Tübingen, Germany (1)
1. Bioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Göttingen, Germany 2. Bioanalytics, University Medical Center, Robert-Koch-Straße 40, 37075 Göttingen, Germany (1)
1Department of Biotechnology and Biomedicine, Technical University of Denmark, DK-2800 Kongens Lyngby, Denmark (1)
Ackermannweg 4, 55128 Mainz, Germany (1)
Bioplatforms Australia (project manager) (1)
Biotech Research & Innovation Center (BRIC), University of Copenhagen, Denmark (1)
CRUK Beatson Institute, Switchback Road, Glasgow G61 1BD, UK. (1)
Centre of Molecular Biology University Heidelberg Im Neuenheimer Feld 282 D-69120 Heidelberg Germany (1)
Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid. (1)
Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC) (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Freising, Germany (1)
Chair of protomeics and bioanalytics, Technical University of Munich, Freising, Germany (1)
Clinic of Reproductive Medicine, Department of Farm Animals Vetsuisse-Faculty University Zurich (1)
Core Unit Proteomics, Berlin Institute of Health at Charite - Universitaetsmedizin Berlin and Max-Delbrueck-Center for Molecular Medicine, Berlin, Germany (1)
Core Unit Proteomics, Berlin Institute of Health at Charité-Universitätsmedizin Berlin and Max-Delbrück-Center for Molecular Medicine, 13125 Berlin, Germany. (1)
DTU Bioengineering (1)

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Radiosynthesis of the norepinephrine transporter tracer [¹⁸ F]NS12137 via copper-mediated ¹⁸ F-labelling.

Not available

S-EPMC6619244 | biostudies-literature

Radiosynthesis and Preclinical Evaluation of [¹⁸F]F-DPA, A Novel Pyrazolo[1,5a]pyrimidine Acetamide TSPO Radioligand, in Healthy Sprague Dawley Rats.

Not available

S-EPMC5574958 | biostudies-literature

Evaluation of [¹⁸F]F-DPA as a target for TSPO in head and neck cancer under normal conditions and after radiotherapy.

Not available

S-EPMC8113193 | biostudies-literature

Clustering of conformational IgE epitopes on the major dog allergen Can f 1.

Not available

S-EPMC5610169 | biostudies-literature

Dissociation of the respiratory syncytial virus F protein-specific human IgG, IgA and IgM response.

Not available

S-EPMC7878790 | biostudies-literature

Uterine fluid proteomic analysis of fertile and subfertile hens before and after insemination

Avian uterine fluid (UF) and uterovaginal sperm storage tubules (SST) are key components for acceptance of sperm in SST, sperm functions maintenance during weeks, sperm release out of SST, and their ascending through the uterus. The study of UF and SST is essential to better understand sperm storage...

ORGANISM(S): Gallus gallus (Chicken)

2019-08-29 | PXD013514 | Pride

Understanding heterogeneity of fetal hemoglobin induction through comparative analysis of F and A erythroblasts.

Not available

S-EPMC7256358 | biostudies-literature

Transcriptome dynamics of Arabidopsis thaliana root penetration by the oomycete pathogen Phytophthora parasitica

Oomycetes from the genus Phytophthora are fungus-like plant pathogens that are devastating for agriculture and natural ecosystems. Due to particular physiological characteristics, no treatments against diseases caused by oomycetes are presently available. To develop such treatments, it appears essen...

ORGANISM(S): Phytophthora parasitica INRA-310

2014-03-01 | E-GEOD-51252 | biostudies-arrayexpress

Engineered covalent leucotoxin heterodimers form functional pores: insights into S-F interactions.

Not available

S-EPMC1462717 | biostudies-literature

Microarray of cardiac biventricle from PGC-1a-/-bf/f/MerCre mice

The following abstract from the submitted manuscript describes the major findings of this work. The metabolic development of high energy-utilizing organs such as the heart involves mitochondrial proliferation at birth followed by a maturation process during the postnatal period. Conditional gene tar...

ORGANISM(S): Mus musculus

2014-01-13 | E-GEOD-43798 | biostudies-arrayexpress

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