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ProteomicsDeepMRM: targeted proteomics data interpretation package with deep learning-based object detection
LC-MRM-MS/MS data of 66 Pancreatic ductal adenocarcinoma patients. Includes peak list files (.mzML), quantification results (.tsv) and raw files (.d) of the three replicate data of all patients.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2022-07-19 | MSV000089914 | MassIVE
UnknownFacile synthesis of nanoporous Mg crystalline structure by organic solvent-based reduction for solid-state hydrogen storage.
Not available
S-EPMC11685778 | biostudies-literature
Proteomicsalpha-lytic proteases
S. pombe proteome digested separately by four proteases and analyzed with an LTQ-Orbitrap Velos with a data-dependent decision tree method.
2013-12-23 | MSV000078516 | MassIVE
ProteomicsProteogenomic characterization of human colon and rectal cancer
Explore This Study at the NCI Proteomic Data Commons

Zhang, B., et al., Nature (2014) do...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-08-26 | MSV000084238 | MassIVE
ProteomicsddDT results from 2014 MCP alpha-lytic protease proteomics paper
ddDT runs of peptides from four separate protease digestions. CID for z=2, ETD for z>=3
ORGANISM(S): Schizosaccharomyces Pombe (ncbitaxon:4896) 
2015-01-30 | MSV000079025 | MassIVE
ProteomicsCID/ETD/HCD triple activation
3 hour nLC-MS/MS runs used to compare/combine CID/ETD/HCD spectra for peptides from four separate protease digesions.
2013-12-23 | MSV000078517 | MassIVE
Proteomics,MultiomicsLIQUID publication data - human plasma lipids
These files are associated with the publication of the LIQUID identification tool for lipid MS/MS spectra.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-11-28 | MSV000080359 | MassIVE
ProteomicsIPRG2015
IPRG-2015 Study -Differential Abundance Analysis in Label-Free Quantitative Proteomics. This study of LC-MS/MS data analysis focuses on data processing and statistical assessment for relative protein-level quantification in label-free proteomics.
ORGANISM(S): Saccharomyces Cerevisiae (ncbitaxon:4932) 
2016-06-20 | MSV000079843 | MassIVE
ProteomicsDigital mapping of immunopeptidomes
We present a novel mass spectrometry-based high-throughput workflow and an open-source computational and data resource to reproducibly identify and quantify HLA-associated peptides. Collectively, the resources support the generation of HLA allele-specific peptide assay libraries consisting of consen...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-04-04 | MSV000079623 | MassIVE
ProteomicsCPTAC, TCGA Cancer Proteome Study of Colorectal Tissue: Proteome, VU, part 3
The goal of the CPTAC, TCGA Cancer Proteome Study of Colorectal Tissue is to analyze the proteomes of TCGA tumor samples that have been comprehensively characterized by molecular methods. Ninety-five TCGA tumor samples were used in this study.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000080159 | MassIVE
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