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TranscriptomicsMolecular responses and metabolic reset of apple fruit under postharvest low oxygen stress
In the present work we report data on the application of an integrated approach on apples held under two levels of low oxygen concentrations throughout the initial 2 months of storage, when, in general, strict control of the effects of the extremely low oxygen concentration is required for a suc...
ORGANISM(S): Malus domestica 
2016-08-20 | E-GEOD-72153 | biostudies-arrayexpress
UnknownRelationships between serum levels of vitamins and papillary thyroid cancer: a single center case-control study.
Not available
S-EPMC10333764 | biostudies-literature
UnknownER-associated VAP27-1 and VAP27-3 proteins functionally link the lipid-binding ORP2A at the ER-chloroplast contact sites.
Not available
S-EPMC11255254 | biostudies-literature
UnknownIntegrated proteogenomic characterization of glioblastoma evolution.
Not available
S-EPMC10939876 | biostudies-literature
GenomicsNeuroblastoma Genome-Wide Association Study (NBL-GWAS)

Neuroblastoma is a malignancy of the developing sympathetic nervous system that most commonly affects young children and is often lethal. The etiology of this embryonal cancer is not known.

We have performed a whole genome scan for association of neuroblastoma with SNP genotypes an...

phs000124.v2.p1 | EGA
UnknownProlonged Mek1/2 suppression impairs the developmental potential of embryonic stem cells.
Not available
S-EPMC5905676 | biostudies-literature
TranscriptomicsRNA-seq of human primary epithelial nasal cells infected with SARS-CoV-2 (20A clade) and treated with long chain inorganic polyphosphates (polyP120) against vehicle-(saline solution)- treated controls
Primary human nasal epithelial cells collected by nasal brushing of healthy donors (data deposited at: EVA- EMBL-EBI; project ID: PRJEB42411; analyses: ERZ1700617) were plated (3x105 cells) and infected with SARS-CoV-2 viral particles 20A (EPI_ISL_514432-S66; MOI, 0.03). After 24 hours, the infected...
ORGANISM(S): Homo sapiens 
2024-05-31 | E-MTAB-13363 | biostudies-arrayexpress
TranscriptomicsIdentification of p53-regulated microRNAs in Hapatocellular Carcinoma (HCC).
p53 suppresses tumor progression and metastasis by regulating a large set of genes and microRNAs. By profiling 92 primary hepatocellular carcinomas (HCCs) and 9 HCC cell lines, we found that p53 upregulates microRNAs including miR-200 and miR-192 family members. By sequencing TP53 in 92 HCC samples,...
ORGANISM(S): Homo sapiens 
2011-05-11 | E-GEOD-28661 | biostudies-arrayexpress
TranscriptomicsTranscriptome sequencing of naked mole rat, Heterocephalus glaber
Deep sequencing of mRNA from naked mole rat Analysis of ploy(A)+ RNA of different specimens: brain, kidney, liver from new born , 4 years old , 20 years old and 4 years old hypoxia-exposed naked mole rat
ORGANISM(S): Heterocephalus glaber 
2011-10-12 | E-GEOD-30337 | biostudies-arrayexpress
TranscriptomicsTargeting ATP2B1 impairs PI3K/Akt/Forkhead box (Fox) transcription factor signaling and reduces SARS-COV-2 infection and replication
RNA-seq of human cells Edited using CRISPR vs parental and Unedited control. We identified a rare homozygous intronic variant in the ATP2B1 locus (rs111337717; chr12:89643729, T>C) that is associated with the severity of COVID-19 (i.e., symptomatic versus asymptomatic patients). Next, we employed ...
ORGANISM(S): Homo sapiens 
2024-05-13 | E-MTAB-13916 | biostudies-arrayexpress
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