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MetabolomicsShort-term changes in the serum metabolome after laparoscopic sleeve gastrectomy and Roux-en-Y gastric bypass

INTRODUCTION: Bariatric surgery is known to be the most effective treatment for weight loss in obese patients and for the rapid remission of obesity-related comorbidities. These short-term improvements result from not only limited digestion or absorption but also dynamic changes ...

2022-03-17 | MTBLS2472 | MetaboLights
TranscriptomicsExpression analysis of Salmonella enterica serovar Typhimurium UK1 delta-iacP mutant
Investigation of whole genome gene expression level changes in a Salmonella enterica serovar Typhimurium UK1 delta-iacP mutant, compared to the wild-type strain. IacP is resoponsible for the secretion of virulence effector proteins via the type III secretion system, thereby contributing the virulenc...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 
2012-04-29 | E-GEOD-34663 | biostudies-arrayexpress
ProteomicsQuantitative proteomic analysis of trypsin-treated extracellular vesicles to evaluate non-vesicular contaminants and surface vesicular proteins.
Extracellular vesicles (EVs) are lipid bilayered vesicles released into extracellular milieu by most of cells. Currently, various purification methods of EVs have been established but most of studies use ultracentrifugation-based purification of EVs. However, these methods have the problem of co-pur...
ORGANISM(S): Homo sapiens (Human) 
2021-08-30 | PXD001355 | Pride
Non-vesicular contaminants Quantitative proteomics Extracellular vesicles Trypsin treatment 
ProteomicsMycobacterium tuberculosis extracellular vesicle proteome
Tuberculosis is a common infectious disease mostly caused by Mycobacterium tuberculosis. M. tuberculosis have been shown to release extracellular vesicles (EVs) containing immunologically active molecules. However, only limited number of proteins has been identified in M. tuberculosis EVs. We presen...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2015-07-30 | PXD001160 | Pride
Exosomes Mycobacterium tuberculosis Extracellular vesicles Outer membrane vesicles Bacteria 
ProteomicsBacillus velezensis strain GH1-13 LC-MS/MS
Bacillus velezensis strain GH1-13 isolated from a rice paddy soil in Korea has been reported to promote plant growth and inhibit some pathogens. It contains a plasmid pBV71, thought to be of benefit to the strain, but there is no information on its effect. In order to elicit the plasmid effect on ge...
ORGANISM(S): Bacillus velezensis 
2021-05-17 | PXD008573 | Pride
Whole cell proteome Growth stage Plasmid pbv71 Bacillus velezensis 
ProteomicsImpact of a conjugative plasmid on plant growth-promoting Bacillus velezensis
Bacillus velezensis strain GH1-13 with a native conjugative plasmid (pBV71) is thought to be beneficial to the bacterium, although no information on its effects exists. Here we show that strain GH1-13 frequently lost the plasmid during normal growth conditions in a rich medium and changed the morpho...
ORGANISM(S): Bacillus velezensis 
2021-05-17 | PXD017305 | Pride
Plant growth-promoting rhizobacteria Conjugative plasmid Bacillus velezensis 
TranscriptomicsExpression data from 17 day old testes of wild type and UBR2-/- mice
Ubiquitylation of histones provides an important mechanism regulating chromatin remodeling and gene expression. Recent studies have revealed ubiquitin ligases involved in histone ubiquitylation, yet the responsible enzymes and the function of histone ubiquitination in spermatogenesis remain unclear....
ORGANISM(S): Mus musculus 
2010-03-03 | E-GEOD-18824 | biostudies-arrayexpress
UnknownIntegrative and comparative genomic analysis of lung squamous cell carcinomas in East Asian patients.
Not available
S-EPMC4062710 | biostudies-literature
UnknownToward male individualization with rapidly mutating y-chromosomal short tandem repeats.
Not available
S-EPMC4145662 | biostudies-literature
UnknownPredictive Nephrotoxicity Profiling of a Novel Antifungal Small Molecule in Comparison to Amphotericin B and Voriconazole.
Not available
S-EPMC7193989 | biostudies-literature
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