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ProteomicsAntioxidant capacity and Peptidomic analysis of in vitro digested Camelina Sativa L. Crantz and Cynara cardunculus co- products
In recent decades, the food system has been faced with the significant problem of increasing food waste. Indeed, as reported by the Food and Agriculture Organisation of the United Nations (FAO), approximately 1.3 billion tonnes of food are lost or wasted globally each year (FAO, 2011). For this reas...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2024-07-03 | PXD049333 | Pride
Peptidomics Antioxidant activity  bioactive peptides  camelina  cardoon  in vitro digestion  phenolic compounds Nanolc-ms/ms. 
TranscriptomicsTranscription profiling of S. cerevisiae exposed to the sudden addition of glucose - short term perturbation
Study of the short term (within the first 330 seconds) transcriptional response of S.cerevisiae upon a sudden addition of glucose. Experiment Overall Design: Chemostat cultivation – Saccharomyces cerevisiae (CEN PK 113-7D) was cultivated in an aerobic carbon-limited chemostat culture in a 7-litr...
ORGANISM(S): Saccharomyces cerevisiae 
2008-06-12 | E-GEOD-3821 | biostudies-arrayexpress
ProteomicsPTMs of Endogenous Tau in Wildtype and hAPP Transgenic Mice
Please Note, if a password is required, please try "a", the generic password for Massive. These data are in support of the manuscript: Post-translational Modifications of Endogenous Tau in Wildtype and Human Amyloid Precursor Protein Transgenic Mice Meaghan Morris*a,b, Giselle M. Knudsen*c, Sumi...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2014-07-30 | MSV000078796 | MassIVE
TranscriptomicsTranscription profiling of Saccharomyces response to lactic acid in anaerobic chemostat cultures
Raw expression values (CHP data) for transcriptional profiling of the response of Saccharomyces cerevisiae to challenges with lactic acid at pH 3 and pH 5. Experiment Overall Design: The laboratory reference strain CEN.PK 113-7D (MATa) was grown at 30 °C in 1.5-L chemostat fermentors (Applikon, Sch...
ORGANISM(S): Saccharomyces cerevisiae 
2008-10-20 | E-GEOD-10066 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Saccharomyces cerevisiae response to weak organic acids in chemostat cultures
Raw expression values (CHP data) for transcriptional profiling of the response of Saccharomyces cerevisiae to challenges with various weak organic acids Experiment Overall Design: The laboratory reference strain CEN.PK 113-7D (MATa) was grown at 30 °C in 2-L chemostat fermentors (Applikon, Schiedam...
ORGANISM(S): Saccharomyces cerevisiae 
2009-04-23 | E-GEOD-5926 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis mutants mpk4 and ctr1
Arabidopsis MPK4 is involved in the control of antagonism between salicylic acid (SA) and ethylene (ET)/jasmonic acid (JA) pathways in the plant innate immune system as a repressor of the SA pathway, but an activator of the ET/JA pathway. Here we and use comparative microarray analysis of ctr1, ctr1...
ORGANISM(S): Arabidopsis thaliana 
2005-08-01 | E-MEXP-174 | biostudies-arrayexpress
TranscriptomicsEngineering topology and kinetics of sucrose metabolism in Saccharomyces cerevisiae for improved ethanol yield
Sucrose is a major carbon source for industrial bioethanol production by Saccharomyces cerevisiae. In yeasts, two modes of sucrose metabolism occur: (i) extracellular hydrolysis by invertase, followed by uptake and metabolism of glucose and fructose, and (ii) uptake via sucrose-H+ symport followed b...
ORGANISM(S): Saccharomyces cerevisiae 
2011-09-05 | E-GEOD-30535 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis wild type, 35S:mks1 and mpk4 plants
In plants, MAPKs are implicated in signalling cascades regulating immediate as well as systemic responses to pathogens. Arabidopsis MAP kinase 4 (MPK4) negatively regulates systemic acquired resistance (SAR) accompanied by the expression of pathogenesis-related (PR) genes. MPK4 interacts with and ph...
ORGANISM(S): Arabidopsis thaliana 
2005-09-01 | E-MEXP-173 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of yeast to investigate the involvement of Snf7 and Rim101 in regulation of TIR1 and anaerobically up-regulated genes
Despite the scientific and applied interest in anaerobic metabolism of Saccharomyces cerevisiae, not all genes whose transcription is up-regulated under anaerobic conditions have yet been linked to known transcription factors. Experiments with a reporter construct in which the promoter of the anaero...
ORGANISM(S): Saccharomyces cerevisiae 
2009-10-02 | E-GEOD-18128 | biostudies-arrayexpress
TranscriptomicsSublethal concentrations of antibiotics cause shift to anaerobic metabolism in Listeria monocytogenes and induce phenotypes linked to antibiotic tolerance
The human pathogenic bacterium Listeria monocytogenes was exposed to antibiotics both during clinical treatment and as a saprophyte. As one of the keys to successful treatment is continued antibiotic sensitivity, the purpose of this study was to determine if exposure to sublethal antibiotic concentr...
ORGANISM(S): Listeria monocytogenes 
2016-06-01 | E-GEOD-65558 | biostudies-arrayexpress
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