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TranscriptomicsTranscriptional analysis of common carp (Cyprinus carpio L.) immune response against Cyprinid herpesvirus 3 (CyHV-3).
Cyprinid herpesvirus 3 (CyHV-3), also known as koi herpesvirus (KHV), is the aetiological agent of an emerging and lethal disease in common and koi carp. In this work we studied the immune response of two genetically different lines of common carp (Polish K and Polish R3) infected with CyHV-3 by imm...
ORGANISM(S): Cyprinus carpio 
2012-01-05 | E-GEOD-30426 | biostudies-arrayexpress
MetabolomicsIdentification of Cetobacterium somerae as a key contributor to muscle quality improvement through intestinal microbiota transplantation from faba bean-fed donors in Yellow River carp (Cyprinus carpio)

Background The gut microbiota plays a significant role in modulating the growth and function of host muscle, and microbiota transplantation experiments provide compelling evidence of its capacity to improve muscle quality. Feeding faba beans improves the muscle quality of Yellow River carp. ...

2025-10-13 | MTBLS13128 | MetaboLights
TranscriptomicsA study on gene expression responses in the common carp to cooling stress using RNA-seq.
Common carp (~0.5kg) previously held for over 3 months at 25°C were randomly placed into two large aquarium tanks, one which remained throughout at 25°C (control) and the other that was cooled over 3 days to 11°C and held for 23 days. Replicate specimens from both tanks were then killed at up to 17...
ORGANISM(S): Cyprinus carpio 
2023-03-01 | E-MTAB-8458 | biostudies-arrayexpress
TranscriptomicsLiver Cyprinus carpio PFOS experiment
Perfluorooctane sulfonate (PFOS) has been manufactured for over 50 years in increasing quantities and has been used for several industrial and commercial aims. Due to the persistence and the bioaccumulation of this pollutant, it can be found worldwide in wildlife and humans. Biochemical effects of P...
ORGANISM(S): Cyprinus carpio 
2008-08-15 | E-GEOD-10980 | biostudies-arrayexpress
TranscriptomicsA study on common carp gene expression response to cooling stress using Ribo-Seq
Common carp (~0.5kg) previously held for over 3 months at 25°C were randomly placed into two large aquarium tanks, one which remained throughout at 25°C (control) and the other was cooled over 3 days to 11°C for 23 days. Replicate specimens from both tanks were then killed at up to 17 timepoints af...
ORGANISM(S): Cyprinus carpio 
2023-03-01 | E-MTAB-8567 | biostudies-arrayexpress
Transcriptomics16S rRNA sequencing raw data of Microcystis aeruginosa and cyanotoxin in grass carp intestine
What are the effects of Microcystis aeruginosa and cyanotoxin on the grass carp intestine? 16S rRNA sequencing is needed to analyze the gut microbiota.
ORGANISM(S): Taeniopygia guttata 
2025-10-25 | E-MTAB-15697 | biostudies-arrayexpress
TranscriptomicsIdentification of miRNA from Cyprinus carpio by high-throughput sequencing and bioinformatics analysis
Common carp is one of the main commercial fishes captured and cultured worldwide. Although common carp genome is not finished yet, this study provides a first large scale cloning and characterization of common carp miRNAs and their potential targets. These miRNAs add to the growing database of new m...
ORGANISM(S): Cyprinus carpio 
2012-07-16 | E-GEOD-35131 | biostudies-arrayexpress
MetabolomicsBile Acid Metabolome in Hepatopancreas Tissue of Common Carp

This study investigated the regulatory effects of three probiotics (P. pentosaceus, B. coagulans, and E. faecalis) on bile acid metabolism in common carp (Cyprinus carpio) fed a high-carbohydrate-high-fat (HCHF) diet for 56 days. A targeted metabolomics approach using UHPLC-QTRAP-MS/MS with sched...

2026-08-09 | MTBLS15295 | MetaboLights
no omics definedTranscription profiling of multiple karp tissues under cold acclimation treatments
To screen for genes involved in cold-acclimation in carp
ORGANISM(S): Cyprinus carpio 
2005-11-09 | E-MAXD-1 | biostudies-arrayexpress
TranscriptomicsAntibiotic-induced Alternations are Associated with the Suppression of Immune-related Pathways in Grass Carp
The use of some antibiotics, including florfenicol and enrofloxacin, is allowed in aquaculture in China. Accordingly, to better address the concerns and questions associated with the impact of administered enrofloxacin and florfenicol to grass carp, here we investigated the transcriptome of the inte...
ORGANISM(S): Ctenopharyngodon idella 
2022-08-08 | E-MTAB-12058 | biostudies-arrayexpress
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