Komagataella phaffii - OmicsDI

Browse
Submit Data
Databases
API
Help

411 Results

Show all Save search Copy query

Show results for

Unknown (237)
Genomics (102)
Transcriptomics (30)
Metabolomics (19)
Proteomics (18)
Models (2)
Other (2)
Methylation profiling (1)

Organisms

Komagataella phaffii (26)
Andropogon gerardi (16)
Bacteria (16)
Canis lupus familiaris (16)
Cnidaria (16)
Cricetulus griseus (16)
Eukaryota (16)
Fasciola (16)
Hepatitis B virus (16)
Human betaherpesvirus 5 (16)
Madurella mycetomatis (16)
Mesocricetus auratus (16)
Miscanthus x giganteus (16)
Mus musculus (16)
Mycobacterium tuberculosis (16)
Orthoflavivirus (16)
Panicum virgatum (16)
Platyhelminthes (16)
Pseudomonas aeruginosa AES-1R (16)
Rattus norvegicus (16)
Rattus rattus (16)
Rhodococcus jostii RHA1 (16)
Saccharomyces cerevisiae (16)
Severe acute respiratory syndrome coronavirus 2 (16)
Shigella (16)
Sorghastrum nutans (16)
Komagataella phaffii GS115 (8)
Komagataella phaffii CBS 7435 (3)
Komagataella pastoris (2)
Saccharomyces cerevisiae (1)

Organisms

Komagataella phaffii (38)
Komagataella phaffii GS115 (16)
Komagataella phaffii JC308 (5)
Komagataella phaffii CBS 7435 (5)
Komagataella (2)

Repository

ENA (99)
geo (34)
GNPS (16)
pride (16)
MetaboLights (3)
BioModels (2)
MassIVE (2)
iProX (1)
jPOST (1)

Tissue

Cell culture (4)
Diploid cell (1)

Technology Type

Mass Spectrometry (16)
Bottom-up proteomics (5)
Data-dependent acquisition (5)
Shotgun proteomics (5)
Mass spectrometry (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Mass spectrometry assay (1)
Data-independent acquisition (1)
RNA mass spectrometry (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Q Exactive HF (13)
Orbitrap ID-X (2)
6560 Q-TOF LC/MS (1)
Orbitrap IQ-X (1)
TimsTOF Pro (1)
TimsTOF fleX (1)
Flow injection analysis MS - (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2022 (16)
2026 (11)
2025 (10)
2020 (8)
2021 (7)
2024 (6)
2019 (5)
2018 (5)
2023 (4)
2017 (1)
2016 (1)
2015 (1)

UNIPROT ID/AC

F2QZ59 (1)
C4QYV5 (1)
F2QWB6 (1)
C4R805 (1)
C4R0F7 (1)
C4R3Y5 (1)
C4R7E1 (1)
C4R7L4 (1)
C4R343 (1)
F2R014 (1)
F2QUP5 (1)
C4QY33 (1)
C4R3M7 (1)
F2QWU0 (1)
C4R0X1 (1)
C4R1V5 (1)
C4R5T2 (1)
C4QVW3 (1)
C4QVW0 (1)
C4QXK8 (1)
C4QWX8 (1)
C4QVB5 (1)
C4QV74 (1)
C4R1P7 (1)
C4QZN1 (1)
C4QY22 (1)
C4R057 (1)
C4R1X5 (1)
C4R8M8 (1)
C4R0Q7 (1)

CHEBI ID

CHEBI:31132 (1)
CHEBI:15678 (1)
CHEBI:16935 (1)
CHEBI:16646 (1)
CHEBI:15689 (1)
CHEBI:10211 (1)
CHEBI:5743 (1)
CHEBI:6163 (1)
CHEBI:2777 (1)
CHEBI:53022 (1)
CHEBI:18090 (1)
CHEBI:59087 (1)
CHEBI:53742 (1)
CHEBI:59085 (1)
CHEBI:15431 (1)
CHEBI:16043 (1)
CHEBI:80453 (1)
CHEBI:78687 (1)
CHEBI:37393 (1)
CHEBI:78682 (1)
CHEBI:27676 (1)
CHEBI:9889 (1)
CHEBI:62912 (1)
CHEBI:50586 (1)
CHEBI:52222 (1)
CHEBI:18634 (1)
CHEBI:76910 (1)
CHEBI:29089 (1)
CHEBI:27859 (1)
CHEBI:17667 (1)

Metabolite Name

Choline (2)
Taurine (2)
Pipecolic acid (2)
Adenosine (2)
Riboflavin (2)
Adenine (2)
Uridine (2)
NG-Methyl-L-arginine (1)
NG,NG-dimethylarginine (1)
Uridine 5'-diphosphate (5'-UDP) (1)
S-(5'-Adenosyl)-L-methionine (SAM) (1)
Guanosine 5'-monophosphate (5'-GMP) (1)
L-(+)-Cystathionine (1)
Adenosine 5'-diphosphate (5'-ADP) (1)
L-(?)-Malic acid (1)
Cytidine-5'-monophosphate (5'-CMP) (1)
Thymidine 5'-diphosphate (5'-TDP) (1)
(+/-)-2-Hydroxyglutaric acid (1)
Cytidine-diphosphocholine (CDP-choline) (1)
Uridine 5'-monophosphate (5'-UMP) (1)
L-(+)-Glutamine (1)
L-(+)-Glutamic acid (1)
Nicotinamide adenine dinucleotide reduced (NADH) (1)
Adenosine 5'-monophosphate (5'-AMP) (1)
Thymidine 5'-monophosphate (5'-TMP) (1)
Glycerin (1)
5'-S-Methyl-5'-thioadenosine (MTA) (1)
L-Phosphatidylcholine (1)
4-Methoxy-4'-(methylthio)chalcone (1)
Sclerotioramin (1)

IsPrivate

False (2)

Model Flag

Non Kinetic (1)

First Public Date

2024 (17)
2025 (14)
2026 (13)
2021 (10)
2013 (9)
2020 (7)
2019 (6)
2023 (4)
2018 (4)
2017 (4)
2022 (3)
2016 (3)
2015 (3)
2014 (2)

Modelling Approach

Other (1)
Ordinary differential equation model (1)

Release Date

2024 (56)
2025 (48)
2023 (37)
2022 (26)
2020 (21)
2021 (17)
2018 (11)
2019 (8)
2017 (6)
2026 (5)
2016 (2)

Lab affiliation

Novo Nordisk Foundation Center for Biosustainability (2)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University of Munich (TUM) Gregor-Mendel-Stasse 4 85354 Freising (1)
Biozentrum, University of Basel, Switzerland (1)
Center for Microbial Ecology and Technology (CMET), Faculty of Bioscience Engineering Ghent University, Coupure Links 653, 9000 Ghent, Belgium, Center for Advanced Process Technology for Urban Resource recovery (CAPTURE), Frieda Saeysstraat 1, 9052 Ghent, Belgium (1)
Charité Universitätsmedizin – Chariteplatz 1, 10117 Berlin (1)
Conway Institute and School of Medicine, University College Dublin, Dublin 4, Ireland (1)
Department of Food Science and Technology, University of Nebraska, Lincoln (1)
Department of Microbial Proteomics, Institute of Microbiology, University of Greifswald, Greifswald, Germany (1)
Institute for Systems Biology, Seattle, WA 98109 (1)
Institute of Food Chemistry and Food Biotechnology (1)
Lab head's affiliation, such as: depChair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germanyartment, lab, institute and country (1)
Underwood-Prescott Professor, Department of Biological Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, 56-731 Cambridge, MA 02139-4307 (1)
University of Natural Resources and Life Sciences, Vienna Department of Chemistry (1)
Vice Director, Professor Novo Nordisk Foundation Center for Protein Research Proteomics Program University of Copenhagen Denmark (1)

Tags

xref:PubMed:32766781 (2)
xref:PubMed:33933073 (2)
xref:PubMed:32187373 (2)
xref:PubMed:41639851 (2)
xref:PubMed:32786350 (1)
xref:PubMed:30464212 (1)
xref:PubMed:31654411 (1)
xref:PubMed:37013612 (1)
xref:PubMed:28865117 (1)
xref:PubMed:39937160 (1)
xref:PubMed:39085844 (1)
xref:PubMed:37897004 (1)
xref:PubMed:34780057 (1)
xref:PubMed:41373606 (1)
xref:PubMed:41087568 (1)
xref:PubMed:21575661 (1)
xref:PubMed:27388471 (1)
xref:PubMed:33688647 (1)
xref:PubMed:34493582 (1)
xref:PubMed:27084056 (1)
xref:PubMed:32265887 (1)
xref:PubMed:38643119 (1)
xref:PubMed:27208115 (1)
xref:PubMed:41121722 (1)
xref:PubMed:34284814 (1)
xref:PubMed:19465926 (1)
xref:PubMed:26400155 (1)
xref:PubMed:40352477 (1)
xref:PubMed:29718186 (1)
xref:PubMed:38255855 (1)

Previous page
1 / 42
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 42
Next page

Sort by:

Relevance

Page size

10

Komagataella phaffii

Komagataella phaffii Raw sequence reads

PRJNA1157989 | ENA

Higher induction temperatures and the native secretion signal peptide promote rye prolamin 75k γ-secalin production in Komagataella phaffii

Background: Gluten proteins from wheat, rye, and barley play a substantial role in human nutrition. At the same time, they can trigger several different immune reactions. This, together with their influence on the quality of grain products and their emerging role as biomaterials, makes them an inter...

ORGANISM(S): Komagataella phaffii Secale cereale

2025-09-09 | PXD062119 | Pride

Secretion signal peptides Prolamin Komagataella phaffii Erad Secale cereale Upr Gluten

Komagataella phaffii

Komagataella phaffii Raw sequence reads

PRJNA1227200 | ENA

Komagataella phaffii GS115

Ribosome profiling in Komagataella phaffii

PRJNA669501 | ENA

Komagataella phaffii JC308

Komagataella phaffii aka Pichia pastoris nucleosome mapping

PRJNA223163 | ENA

Komagataella phaffii JC308

Komagataella phaffii Pichia pastoris replication timing profile

PRJNA223162 | ENA

Komagataella phaffii GS115

Komagataella phaffii GS115 Raw sequence reads

PRJNA414726 | ENA

Komagataella phaffii strain:WT

Komagataella phaffii WT genome sequencing and assembly

PRJNA304977 | ENA

Komagataella phaffii

Transcriptome analysis of PAS_0305 deleted strain of Komagataella phaffii

PRJDB40415 | ENA

Komagataella phaffii GS115

Komagataella phaffii GS115 Genome sequencing and assembly

PRJNA304976 | ENA

Previous page
1 / 42
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 42
Next page

Sort by:

Relevance

Page size

10

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data