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TranscriptomicsA Notch ligand, Delta-like 1 functions as an adhesion molecule for mast cells
To assess the effect of over-expression of Delta-like 1 on OP9 cells on gene expression in terms of Notch signaling and adhesion molecules, gene expressions of OP9, OP9-GFP (carrying GFP gene) and OP9-DL1 (carrying GFP and DL1 gene) cells (Immunity 2002;17:749-756) were analyzed. Gene expression of ...
ORGANISM(S): Mus musculus 
2010-10-01 | E-GEOD-22659 | biostudies-arrayexpress
TranscriptomicsHuman lung minimally invasive adenocarcinoma (MIA): lepidic growth (LG) cancer cell pool vs. micro-invasion (MI) cancer cell pool
Transcriptional profiling of human lung minimally invasive adenocarcinoma cells comparing control lepidic growth (LG) cell pool with micro-invasion (MI) cell pool. Two-condition experiment, LG vs. MI cell pools. Biological replicates: 1 control LG cancer cell, 1 MI cancer cell in an individual MIA t...
ORGANISM(S): Homo sapiens 
2012-01-02 | E-GEOD-30663 | biostudies-arrayexpress
TranscriptomicsTo study gene expression of PHO80-deleted yeast strain in xylose fermentation
The main objective is to improve xylose fermentation by deletion of PHO80 gene in recombinant xylose-fermenting yeast strains. Microarray analysis was performed to investigate effects of PHO80 deletion on the gene expression profile of xylose-fermenting strains. Samples for 2 strains (wild-type cont...
ORGANISM(S): Saccharomyces cerevisiae 
2013-04-24 | E-GEOD-46309 | biostudies-arrayexpress
ProteomicsProteome analysis of affinity-purified protein co-precipitates
HBO1-MLL interaction promotes AF4/ENL/P-TEFb-mediated leukemogenesis
ORGANISM(S): Homo Sapiens (human) 
2021-08-31 | PXD027400 | JPOST Repository
TranscriptomicsDNA microarray analysis of labial salivary glands in IgG4-related disease M-bM-^@M-^S comparison with SjM-CM-6grenM-bM-^@M-^Ys syndrome
To compare gene expression in labial salivary glands (LSG) of IgG4-related disease (IgG4-RD) with SjM-CM-6grenM-bM-^@M-^Ys syndrome (SS). Gene expression was analyzed by DNA microarray in LSG of IgG4-RD (n=5), SS (n=5), and healthy controls (n=3). Differentially expressed genes...
ORGANISM(S): Homo sapiens 
2014-06-23 | E-GEOD-40568 | biostudies-arrayexpress
TranscriptomicsTo study gene expression by xylose fermenting strains in the presence and absence of furfural
The main objective is to develop a strain tolerant to furfural for ethanol production from lignocellulosic hydrolysates. We compare gene expressions among three genetically modified S. cerevisiae (control, TAL-expressing and TAL-ADH expressing strain) under the presence and absence of furfural. Samp...
ORGANISM(S): Saccharomyces cerevisiae 
2013-06-01 | E-GEOD-45273 | biostudies-arrayexpress
ProteomicsPeptide mapping and intact mass analysis of RBD protein from a SARS-CoV-2 omicron variant (RBDom)
RBD protein from the SARS-CoV-2 omicron variant (RBDom) was produced in Komagataella phaffii. Peptide mapping and intact mass analysis of RBDom were performed by LC/MS. Proteins were identified using BioPharma Finder software.
ORGANISM(S): Komagataella Phaffii 
2024-10-30 | PXD057342 | JPOST Repository
ProteomicsRedox potential of Synechocystis PCC 6803
comprehensive measurement of redox potential of cyanobacterium Synechocystis
ORGANISM(S): Cellular Organisms Synechocystis 
2026-05-06 | PXD071907 | JPOST Repository
ProteomicsSyn6803 Pyk-ox under light and dark
Effect of pyruvate kinase (Sll0587) overexpression under both light and dark conditions.
ORGANISM(S): Cellular Organisms 
2024-10-16 | PXD053484 | JPOST Repository
ProteomicsIncreased carvone production in Escherichia coli by balancing limonene conversion enzyme expression via targeted quantification concatamer proteome analysis
The cytochrome P450 limonene-6-hydroxylase (P450), cytochrome P450 reductase (CPR) and carveol dehydrogenase (CDH) were expressed in Escherichia coli for (−)-carvone production from (−)-limonene. The optimum ratio of enzyme expression to maximize (−)-carvone production was determined using the prote...
ORGANISM(S): Escherichia Coli 
2022-08-24 | PXD028077 | JPOST Repository
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