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ProteomicsSample preparation for phosphoproteomic analysis of circadian time series in Arabidopsis thaliana
Systems biological approaches to study the Arabidopsis thaliana circadian clock have mainly focused on transcriptomics while little is known about the proteome, and even less about post-translational modifications. Evidence has emerged that post-translational protein modifications, in particular pho...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2016-07-06 | PXD001134 | Pride
Arabidopsis thaliana Detergent removal Acid-labile detergent Fractionation Phosphopeptide enrichment Phosphoproteomics 
ProteomicsArabidopsis circadian proteomics and phosphoproteomics in Col0 and CCA1-Ox
Proteomics and phosphoproteomics analyses of circadian time course samples of Arabidopsis thaliana rosettes (22 DAS) in constant light. Two independent experiments, with global proteomics and phosphoproteomics analyses for each. Experiment I has a time point every 4h from ZT12 to ZT32, experiment 2 ...
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2018-03-16 | MSV000082175 | MassIVE
OtherLabel-free quantitative analysis of the casein kinase 2-responsive phosphoproteome of the marine minimal model species Ostreococcus tauri.
Data from ProteomeXchange, PXD ID: PXD000975. File: F010311.mgf. Published as part of Proteomics. 2015 Apr 29 . From the Abstract: {{i}} Casein kinase 2 (CK2) is a protein kinase that phosphorylates a plethora of cellular target proteins involved in processes including DNA repair, cell cycle contro...
ORGANISM(S): Ostreococcus_tauri 
GPM32320017651 | GPMDB
Resource Reanalysis 
ProteomicsGIGANTEA interaction proteomics time course
Interaction proteomics time course over 24h every 4h, looking for novel interactors of the circadian clock and flowering time protein GIGANTEA. Plants expressing 35S:GIGANTEA:3xFlag6His were used, as well as WT plants for a background control.
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2017-07-03 | MSV000081217 | MassIVE
ProteomicsA.thaliana - Rosette, normalized abundance (Krahmeretal,molcellproteomics2022)
abundance based on normalized abundance, Interaction consistency score: 6.7, Coverage: 5
ORGANISM(S): 3702 
2022-00-00 | 1326924861 | PAXDB
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