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TranscriptomicsPROseq (Precision Run-On sequencing) to capture nascent RNA of wild type and mutant mouse embryonic stem cells
Precision Run-On Sequencing (PROseq) data for wild type (WT) and mutant mouse embryonic stem cells from Kreibich et al., 2022. PROseq data was obtained by permeabilizing the cells, performing a 2 biotin run-on reaction using biotin-11-UTP and biotin-11-CTP and subsequent enrichments steps for biotin...
ORGANISM(S): Mus musculus 
2023-02-06 | E-MTAB-12601 | biostudies-arrayexpress
ProteomicsSplit-TurboID with Bre5 and Rps2 in Saccharomyces cerevisiae
The in vivo labeling technique Split-Biotin identification (Split-BioID, De Munter et al., 2017, Schopp et al., 2017, Cho et al., 2020) was used to capture the common microenvironment of Bre5 and the ribosomal protein Rps2 (uS5). Biotinylated proteins were enriched from cell lysates using affinity p...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2021-11-10 | PXD028879 | Pride
Split-turboid Rps2 Split-bioid Us5 Silac Saccharomyces cerevisiae Ribosome Bre5 
GenomicsBait-capture based single molecule footprinting of different mouse cell lines
Bait-capture based Single Molecule Footprinting (SMF) data from Kreibich et al., 2022. SMF data is obtained by treating extracted nuclei with a GpC methyltransferase, where binding of proteins on DNA, e.g. nucleosomes and transcription factors (TFs), leave behind unmethylated GpCs as footprints. Dat...
ORGANISM(S): Mus musculus 
2023-02-06 | E-MTAB-11700 | biostudies-arrayexpress
UnknownFactors associated with relevant knowledge of intestinal schistosomiasis and intention to participate in treatment campaigns: a cross sectional survey among school children at Ijinga Island on Lake Victoria, North-Western Tanzania.
Not available
S-EPMC6937638 | biostudies-literature
UnknownMouse promoters are characterised by low occupancy and high turnover of RNA polymerase II.
Not available
S-EPMC12048509 | biostudies-literature
UnknownThe Value of Empirical Data for Estimating the Parameters of a Sociohydrological Flood Risk Model.
Not available
S-EPMC6472491 | biostudies-literature
UnknownInferior mesenteric artery diameter and number of patent lumbar arteries as factors associated with significant type 2 endoleak after infrarenal endovascular aneurysm repair.
Not available
S-EPMC9252125 | biostudies-literature
UnknownSNX31: a novel sorting nexin associated with the uroplakin-degrading multivesicular bodies in terminally differentiated urothelial cells.
Not available
S-EPMC4051706 | biostudies-literature
UnknownImpact of the Presence of Chronic Total Occlusions on the Survival of Patients Treated with Coronary Artery Bypass Grafting.
Not available
S-EPMC12295936 | biostudies-literature
UnknownMeasuring endemicity and burden of leprosy across countries and regions: A systematic review and Delphi survey.
Not available
S-EPMC8483296 | biostudies-literature
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