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TranscriptomicsRNA-seq of A431 cell line after gefitinib treatment
RNA sequencing of A431 cell line samples before and after gefitinib treatment, at 0, 2, 6 and 24 hours, was performed in order to characterize the cell line's early and late response to this drug, and to compare against proteomics (mass spectrometry) characterization of the cell line using the same ...
ORGANISM(S): Homo sapiens 
2016-12-01 | E-MTAB-5285 | biostudies-arrayexpress
OtherA double-barrel LC-MS/MS system to quantify 96 interactomes per day.
Data from ProteomeXchange, PXD ID: PXD001695. File: 20140827_EXQ00_FaHo_SA_SWI3_03.mzml. Published as part of Mol Cell Proteomics. 2015 Apr 17 . From the Abstract: {{i}} ... Here we develop a high-throughput workflow capable of dealing with large numbers of low or medium complexity samples and spec...
ORGANISM(S): Yeast 
GPM11210038526 | GPMDB
Resource Reanalysis 
TranscriptomicsObjective molecular criteria for oocyte quality and developmental potential: a proteomic study in inbred mice
Current understanding of oocyte quality and developmental potential maintains that stochastic or epigenetic processes modulate the action of determinants that are laid in the oocyte during oogenesis. These determinants are considered to be rather conserved across mice, leading different strains of m...
ORGANISM(S): Mus musculus 
2016-06-18 | E-MTAB-5013 | biostudies-arrayexpress
MetabolomicsMetabolomics sequencing raw data of feces and serum from British Shorthair cats

This study explores the effect of antimicrobial peptides on improving the behavior and physiological and biochemical indicators of British shorthair cats after transportation stress and unfamiliar environment stress. This part is the original data obtained after the feces and blood collected befo...

2026-01-22 | MTBLS13746 | MetaboLights
UnknownSequencing Heparan Sulfate Using HILIC LC-NETD-MS/MS.
Not available
S-EPMC7161314 | biostudies-literature
MetabolomicsA Combined LC-MS Metabolomics- and 16S rRNA Sequencing Platform to Assess Interactions between Herbal Medicinal Products and Human Gut Bacteria in Vitro: a Pilot Study on Willow Bark Extract
Herbal preparations are complex mixtures of natural products, many of which are able to reach the distal gut. There, they influence the microbial communities, and can be metabolized into bioactive metabolites. The aim of this study was to establish an interdisciplinary platform to unravel interactio...
2017-12-14 | MTBLS479 | MetaboLights
MetabolomicsThe Bardet-Biedl protein Bbs1 controls photoreceptor outer segment protein and lipid composition

Summary

Primary cilia are key sensory organelles whose dysfunction leads to ciliopathy disorders such as Bardet-Biedl syndrome (BBS). Retinal degeneration is common in ciliopathies, since the outer segments (OSs) of photoreceptors are highly specialized primary cilia. BBS...

2022-02-18 | MTBLS4013 | MetaboLights
MetabolomicsNon-targeted metabolomics sequencing of Lactobacillus salivarius fermentation broth
To conduct an in-depth analysis of which metabolites in the antiviral-effective lactic acid bacteria supernatant are playing a role, a pretreatment approach was selected. Non-targeted metabolomic analysis was performed on the differential metabolites between LSD2339-CFS and LSM231-CFS, which exhibit...
2026-06-08 | MTBLS14704 | MetaboLights
MetabolomicsIntegrative of Single-Cell RNA Sequencing and Metabolomics Decipher the Imbalanced Lipid-Metabolism in Maladaptive Immune Responses during Sepsis
To identify differentially expressed lipid metabolism-related genes (DE-LMRGs) responsible for immune dysfunction in sepsis. Machine learning algorithms were applied for screening hubgenes related to lipid metabolism. CIBERSORT and Single-sample GSEA were employed for assessing the immune cell infil...
2024-09-26 | MTBLS7315 | MetaboLights
MetabolomicsTargeted metabolomic sequencing of IGFBP2-overexpressed hVSMCs cultured in calcification medium for 7 days
We performed untargeted LC-MS metabolomics on human serum samples. The aim of this study was to screen differential metabolites and explore disturbed metabolic pathways between case and control groups, providing potential metabolic signatures for disease.
2026-10-26 | MTBLS16158 | MetaboLights
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