Lee H-J HJ - OmicsDI

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Unknown (2189)
Genomics (85)
Proteomics (34)
Metabolomics (8)
Transcriptomics (3)
Other (1)

Organisms

Homo sapiens (108)
Mus musculus (9)
Akkermansia muciniphila ATCC BAA-835 (1)
Caenorhabditis elegans (1)
Enterovirus A71 (1)
Xanthomonas citri pv. glycines str. 8ra (1)

Repository

EGA (84)
pride (32)
MetaboLights (8)
biostudies-arrayexpress (4)
MassIVE (2)
GPMDB (1)

Tissue

Cell culture (8)
Brain (4)
Blood plasma (3)
Lung (3)
Permanent cell line cell (3)
Embryonic stem cell (2)
Epithelial cell (2)
Breast (1)
Forebrain (1)
Gastrocnemius (1)
Liver (1)
Melanocyte (1)
Muscle contraction (1)
Nasal epithelium (1)
Neoplastic (1)
Neuronal stem cell (1)
Placenta (1)
Skin (1)
Skin of body (1)
Stomach (1)
Urine (1)
Whole body (1)

Disease

Brain glioblastoma multiforme (2)
Breast cancer (2)
Not Available (1)
Duchenne muscular dystrophy (1)
Melanoma (1)
Pancreatic ductal adenocarcinoma (1)
Parkinson's disease (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (32)
Shotgun proteomics (21)
Mass spectrometry (7)
Bottom-up proteomics (5)
Gel-based experiment (4)
Data-dependent acquisition (3)
Affinity purification coupled with mass spectrometry proteomics (2)
SWATH MS (2)
ABI_SOLID, Illumina HiSeq 2000, Illumina 450K, AB 5500xl Genetic Analyzer, AB 5500 Genetic Analyzer, ILLUMINA (1)
NMR spectroscopy (1)
Data-independent acquisition (1)
SRM/MRM (1)

Instrument Platform

Q Exactive (2)
Instrument (1)
LTQ Orbitrap Velos Pro (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Flame ionisation detector MS - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Nuclear Magnetic Resonance (NMR) (1)

Publication Date

2021 (7)
2024 (5)
2026 (5)
2020 (5)
2023 (4)
2025 (4)
2013 (3)
2022 (3)
2017 (2)
2019 (2)
2018 (2)
2016 (2)
2014 (1)
2015 (1)

CHEBI ID

CHEBI:15354 (5)
CHEBI:16811 (4)
CHEBI:18186 (4)
CHEBI:24898 (4)
CHEBI:25017 (4)
CHEBI:27897 (4)
CHEBI:29016 (4)
CHEBI:15428 (3)
CHEBI:15741 (3)
CHEBI:16449 (3)
CHEBI:16708 (3)
CHEBI:17234 (3)
CHEBI:17596 (3)
CHEBI:17822 (3)
CHEBI:18237 (3)
CHEBI:25094 (3)
CHEBI:26986 (3)
CHEBI:27266 (3)
CHEBI:28044 (3)
CHEBI:28300 (3)
CHEBI:6650 (3)
CHEBI:15355 (2)
CHEBI:15356 (2)
CHEBI:15611 (2)
CHEBI:15724 (2)
CHEBI:15727 (2)
CHEBI:15756 (2)
CHEBI:15891 (2)
CHEBI:15956 (2)
CHEBI:16020 (2)

Metabolite Name

Alanine (2)
Arginine (2)
Choline (2)
Fructose (2)
Glucose (2)
Glutamine (2)
Glycerol (2)
Glycine (2)
Inosine (2)
Isoleucine (2)
Lactate (2)
Leucine (2)
Malate (2)
Methionine (2)
PE 34:2 (2)
PE 36:2 (2)
PE 38:4 (2)
Phenylalanine (2)
Proline (2)
Putrescine (2)
Serine (2)
Succinate (2)
Threonine (2)
Trimethylamine N-oxide (2)
Tryptophan (2)
Tyrosine (2)
Valine (2)
(R)-3-hydroxybutyrylcarnitine (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4)* (1)

Study type

Comparative genomic hybridization by array (2)
Transcription profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (259)
2023 (244)
2021 (240)
2024 (232)
2022 (221)
2020 (179)
2019 (147)
2018 (140)
2015 (97)
2016 (91)
2017 (88)
2014 (66)
2026 (48)
2012 (46)
2013 (42)
2011 (22)
2010 (12)
2008 (8)
2009 (6)
2006 (2)
2005 (1)
2003 (1)
2001 (1)

Lab affiliation

Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (2)
Korea Brain Research Institute, Daegu, 41068, Korea (2)
Biomedical Omics Research, Korea Basic Science Institute, Cheongju, Korea (1)
Center for Plant Aging Research, Institute for Basic Science, and Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 42988, Republic of Korea (1)
Center for RNA Research, Institute for Basic Science, Seoul 08826, S. Korea School of Biological Sciences, Seoul National University, Seoul 08826, S. Korea (1)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea (1)
Chang Gung University Department of Medical Biotechnology and Laboratory Science (1)
Chung-Ang University (1)
Departmemt of Digital Medicine, University of Ulsan, College of Medicine, Asan Medical Center, South Korea (1)
Department of Biochemistry, College of Life Science and Technology, Institute for Bio-medical Convergence Science and Technology, Yonsei University, Seoul, Republic of Korea (1)
Department of Biochemistry, University of Cambridge (1)
Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, 34141, South Korea KAIST Stem Cell Center, KAIST, Daejeon 34141, South Korea (1)
Department of Biosciences, Univesity of Oslo (1)
Department of Biotechnology, College of Life Science and Biotechnology, Korea University, Seoul, Republic of Korea (1)
Department of Chemistry, Korea University (1)
Department of Internal Medicine, School of Medicine, Kyungpook National University, Kyungpook National University Hospital, Daegu, Republic of Korea (1)
Department of Plant Science and Technology, Chung-Ang University, Anseong, Republic of Korea (1)
Division of Clinical Protein Science & Imaging, Department of Clinical Sciences (Lund), Department of Biomedical Engineering, Lund University, Lund, Sweden (1)
Group for Biometrology, Korea Research Institute of Standards and Science (KRISS), Daejeon, 34113, Republic of Korea (1)
IMP, Vienna Biocenter, Vienna, Austria (1)
Korea Basic Science Institute (1)
Korea institute of science and technology, Doping control center, Seoul, S,Korea (1)
L7235, Center for Theragnosis, Korea Institute of Science and Technology, Republic of Korea (1)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (1)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 NeuchÃ¢tel, Switzerland (1)
Prometabio Research Institute, prometabio co., ltd. (1)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (1)
Yonsei Proteome Research Center (1)
Yonsei Proteome Research Center, Yonsei University (1)
Yonsei Proteome Research Center, Yonsei University, Seoul, Korea (1)

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Role of jeotgal, a Korean traditional fermented fish sauce, in microbial dynamics and metabolite profiles during kimchi fermentation

We investigated the effects of jeotgal (fermented fish sauce) on kimchi fermentation, with or without saeu-jeot and myeolchi-jeot. Bacterial community analysis showed that Leuconostoc, Weissella, Lactobacillus, and Tetragenococcus were the dominant genera; however, their succession depended on the p...

2019-02-07 | MTBLS654 | MetaboLights

Liver disease-associated keratin 8 and 18 mutations modulate keratin acetylation and methylation.

Not available

S-EPMC6988862 | biostudies-literature

Short-term changes in the serum metabolome after laparoscopic sleeve gastrectomy and Roux-en-Y gastric bypass

INTRODUCTION: Bariatric surgery is known to be the most effective treatment for weight loss in obese patients and for the rapid remission of obesity-related comorbidities. These short-term improvements result from not only limited digestion or absorption but also dynamic changes ...

2022-03-17 | MTBLS2472 | MetaboLights

Extracellular RNAs in periodontopathogenic outer membrane vesicles promote TNF-α production in human macrophages and cross the blood-brain barrier in mice.

Not available

S-EPMC6894046 | biostudies-literature

The histone demethylase KDM5A is required for the repression of astrocytogenesis and regulated by the translational machinery in neural progenitor cells.

Not available

S-EPMC6266631 | biostudies-literature

Impact of whole-body versus nose-only exposure systems on systemic, respiratory, and cardiovascular endpoints in a 2-month cigarette smoke exposure study in the ApoE-/- mouse model [Lung data]

The objective of this study was to compare the biological and toxicological response of apolipoprotein E-deficient (Apoe-/-) mice to 3R4F mainstream smoke exposure for 2 months in whole-body exposure chambers (WBEC) and nose-only exposure chambers (NOEC). Female ApoE-/- mice were randomized into fou...

ORGANISM(S): Mus musculus (Mouse)

2021-02-26 | PXD018185 | Pride