Lee J J JJ - OmicsDI

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Unknown (3141)
Genomics (45)
Transcriptomics (33)
Proteomics (33)
Metabolomics (19)

Organisms

Homo sapiens (81)
Mus musculus (14)
Saccharomyces cerevisiae (5)
Corynebacterium glutamicum ATCC 13032 (2)
Bos taurus (1)
Candidatus Nitrosotenuis chungbukensis (1)
Nitrososphaera viennensis EN76 (1)
Steinernema carpocapsae (1)

Repository

EGA (44)
biostudies-arrayexpress (33)
pride (27)
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Tissue

Cell culture (9)
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Disease

Influenza (2)
Amyotrophic lateral sclerosis (1)
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Disease free (1)
Lysosomal storage disease (1)
Neuroendocrine tumor (1)
Niemann-Pick disease type C2 (1)

Technology Type

Mass Spectrometry (27)
Mass spectrometry (17)
Shotgun proteomics (17)
Illumina 15K (8)
Bottom-up proteomics (7)
Affinity purification coupled with mass spectrometry proteomics (3)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
Illumina HiSeq 2000 (1)
Gel-based experiment (1)
Mass spectrometry imaging (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (8)
Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - negative - hilic (5)
Liquid Chromatography MS - positive - hilic (3)
NextSeq 550 (2)
Direct infusion MS - positive (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Q Exactive (2)
LTQ Orbitrap Velos Pro (1)
Orbitrap Ascend (1)
Orbitrap Astral (1)
Orbitrap Eclipse (1)
TripleTOF 6600 (1)
5975C Series GC/MSD (Agilent) (1)
6460 Triple Quadrupole LC/MS (Agilent) (1)
Direct infusion MS - negative (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - - reverse phase (1)
Liquid Chromatography MS - positive - HILIC (1)
MS Imaging - (1)

Publication Date

2022 (10)
2024 (7)
2010 (6)
2023 (6)
2026 (6)
2013 (5)
2012 (5)
2025 (5)
2017 (4)
2014 (4)
2011 (4)
2020 (4)
2019 (4)
2016 (3)
2015 (3)
2021 (3)
2008 (1)
2006 (1)
2018 (1)

CHEBI ID

CHEBI:30769 (9)
CHEBI:25094 (8)
CHEBI:16704 (7)
CHEBI:28300 (7)
CHEBI:15428 (6)
CHEBI:15756 (6)
CHEBI:16811 (6)
CHEBI:17568 (6)
CHEBI:17750 (6)
CHEBI:17822 (6)
CHEBI:18186 (6)
CHEBI:18237 (6)
CHEBI:22653 (6)
CHEBI:25017 (6)
CHEBI:27570 (6)
CHEBI:27897 (6)
CHEBI:28044 (6)
CHEBI:30887 (6)
CHEBI:30915 (6)
CHEBI:15354 (5)
CHEBI:15741 (5)
CHEBI:15891 (5)
CHEBI:15963 (5)
CHEBI:16196 (5)
CHEBI:16411 (5)
CHEBI:16449 (5)
CHEBI:16708 (5)
CHEBI:16750 (5)
CHEBI:17148 (5)
CHEBI:17151 (5)

Metabolite Name

Glutamine (4)
Methionine (4)
Palmitic acid (4)
Proline (4)
6-phosphogluconate (3)
AMP (3)
Adenine (3)
Arginine (3)
Citrate (3)
D-Glucose (3)
Fumarate (3)
Glutamate (3)
Glycine (3)
Guanine (3)
Guanosine (3)
Histidine (3)
Lactate (3)
Leucine (3)
Linoleic acid (3)
Lysine (3)
N-acetylalanine (3)
N-acetylserine (3)
Phenylalanine (3)
Pyruvate (3)
Ribitol (3)
Serine (3)
Stearic acid (3)
Succinate (3)
Succinic acid (3)
Taurine (3)

First Public Date

2014 (1)

Study type

Transcription profiling by array (18)
Methylation profiling by array (4)
ChIP-chip by tiling array (3)
Unknown experiment type (3)
RIP-seq (2)
Other (1)
RNA-seq of coding RNA (1)
Transcription profiling by tiling array (1)

Release Date

2022 (338)
2024 (330)
2021 (319)
2023 (316)
2025 (281)
2020 (272)
2019 (192)
2018 (188)
2017 (185)
2016 (155)
2015 (125)
2014 (99)
2013 (84)
2012 (79)
2011 (56)
2026 (52)
2010 (41)
2008 (22)
2009 (17)
2006 (8)
2007 (7)
2003 (3)
2000 (2)
2005 (1)
2001 (1)
1998 (1)

Lab affiliation

1VIB Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium 2Department of Biomolecular Medicine, Ghent University, Ghent, 9052, Belgium (2)
1 VIB Center for Medical Biotechnology, VIB, Ghent, East Flanders, 9052, Belgium 2 Department of Biomolecular Medicine, Ghent University, Ghent, East Flanders, 9052, Belgium (1)
Adult Cancer Program, Faculty of Medicine, Lowy Cancer Research Centre, University of New South Wales Sydney, NSW, Australia (1)
Australian Proteome Analysis Facility, Macquarie University, North Ryde, NSW, 2109, Australia (1)
BK21 Plus KNU Multi-Omics-based Creative Drug Research Team, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Republic of Korea (1)
Canada's Michael Smith Genome Sciences Centre at BC Cancer, Vancouver V5Z 1L3, Canada (1)
Department of Applied Chemistry, Institute of Natural Science, Global Center for Pharmaceutical Ingredient Materials, Kyung Hee University, Yongin, Republic of Korea; Department of Biomedical Science and Technology, Kyung Hee Medical Science Research Institute, Kyung Hee University, Seoul, Republic of Korea. (1)
Department of Cell Biology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA. (1)
Department of Chemical Engineering, University of Texas at Austin, Austin, TX, USA. (1)
Department of Chemical Engineering, University of Texas at Austin, Austin, Texas, USA (1)
Harvard Institutes of Medicine, BWH/Genetics 77 Avenue Louis Pasteur, Boston MA 02115, United States (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Toxicology Permoserstraße 15, 04318 Leipzig, Germany (1)
Institute for Basic Science and Seoul National University (1)
Institute for Cell and Molecular Biology, Department of Molecular Biosciences 2500 Speedway, MBB 3.312B Austin, TX 78712-1095, USA (1)
Korea Basic Science Institute (1)
Kyung Hee University (1)
Laboratory of Molecular and Functional Neurobiology (Temmerman Lab), Department of Biology, KU Leuven, Belgium (1)
Medimmune LLC (1)
Microbiome Convergence Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Korea (1)
Molecular Physiology & Biophysics Department , Wright Lab, University of Iowa, USA (1)
Molecular Physiology & Biophysics Department, Wright Lab, University of Iowa, USA (1)
Professor Director, Executive Ph.D. Program Department of Biochemistry & Molecular Biology Sylvester Comprehensive Cancer Center Miller School of Medicine University of Miami R. Bunn Gauthier Building, Rm 216 Miami, FL, 33101-6129 (1)
Proteomics core facility, Biomedical Reseach Institute, Seoul National University Hospital (1)
Proteomics core facility, Seoul National University Hospital (1)
University of Sydney (1)
University of Wisconsin-Madison (1)

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Hormone signaling linked to silkmoth sex pheromone biosynthesis involves Ca2+/calmodulin-dependent protein kinase II-mediated phosphorylation of the insect PAT family protein Bombyx mori lipid storage droplet protein-1 (BmLsd1).

Species-specific sex pheromones released by female moths to attract conspecific male moths are synthesized de novo in the pheromone gland (PG) via the fatty acid biosynthetic pathway. This pathway is regulated by a neurohormone termed pheromone biosynthesis activating neuropeptide (PBAN), a 33-amino...

S-EPMC3129191 | biostudies-literature

Down-regulation of ATF1 leads to early neuroectoderm differentiation of human embryonic stem cells by increasing the expression level of SOX2.

We reveal by high-throughput screening that activating transcription factor 1 (ATF1) is a novel pluripotent regulator in human embryonic stem cells (hESCs). The knockdown of ATF1 expression significantly up-regulated neuroectoderm (NE) genes but not mesoderm, endoderm, and trophectoderm genes. Of no...

S-EPMC6704446 | biostudies-literature

The usefulness of flexible cystoscopy for preventing double-J stent malposition after laparoscopic ureterolithotomy.

Background

The aim of this study was to evaluate the role of flexible cystoscopy in preventing malpositioning of the ureteral stent after laparoscopic ureterolithotomy in male patients.

Methods

From April 2009 to June 2015, 97 male patients with stones >1.8 cm in the upper ureter unde...

S-EPMC5472879 | biostudies-literature

J-curve relationship between corrected QT interval and mortality in acute heart failure patients.

Background/aims

This study investigated the prognostic power of corrected QT (QTc) interval in patients with acute heart failure (AHF) according to sex.

Methods

We analyzed multicenter Korean Acute Heart Failure registry with patients with AHF admitted from 2011 to 2014. Among them, w...

S-EPMC7652667 | biostudies-literature

Dissemination of fluoroquinolone-resistant Campylobacter spp. within an integrated commercial poultry production system.

While characterizing the intestinal bacterial community of broiler chickens, we detected epsilon-proteobacterial DNA in the ilea of 3-day-old commercial broiler chicks (J. Lu, U. Idris, B. Harmon, C. Hofacre, J. J. Maurer, and M. D. Lee, Appl. Environ. Microbiol. 69:6816-6824, 2003). The sequences e...

S-EPMC1472311 | biostudies-literature

Dissecting Genetic Mechanisms of Differential Locomotion, Depression, and Allodynia after Spinal Cord Injury in Three Mouse Strains.

Strain differences have been reported for motor behaviors, and only a subset of spinal cord injury (SCI) patients develop neuropathic pain, implicating genetic or genomic contribution to this condition. Here, we evaluated neuropsychiatric behaviors in A/J, BALB/c, and C57BL/6 male mice and tested ge...

S-EPMC11083625 | biostudies-literature

Successful Intubation Using a Cap-Assisted Colonoscope for Endoscopic Retrograde Cholangiopancreatography in Patients Undergoing Roux-en-Y Reconstruction.

Endoscopic retrograde cholangiopancreatography (ERCP) is challenging in patients undergoing Roux-en-Y (REY) reconstruction; although balloon-assisted enteroscopy is the first-line treatment, it is not always available considering equipment and expertise. We aimed to evaluate the feasibility of using...

S-EPMC9966074 | biostudies-literature

Systolic blood pressure and outcomes in stage 3-4 chronic kidney disease patients: evidence from a Taiwanese cohort.

Background

Systolic blood pressure (SBP) goal for chronic kidney disease (CKD) patients is ≤140mm Hg. However, the SBP target provides no suggested lower limit, and some studies indicate that a lower SBP target may be harmful. We aimed to investigate the J-shaped relationship between SBP and...

S-EPMC4263936 | biostudies-literature

Effects of naftopidil on double-J stent-related discomfort: a multicenter, randomized, double-blinded, placebo-controlled study.

To evaluate the effect of naftopidil 75 mg once daily for ureteral double-J (DJ) stent-related discomfort after a ureteroscopic procedure using a multicenter, randomized, double-blinded, placebo-controlled study. 100 patients with indwelled retrograde DJ ureteral stents after ureteroscopic stone rem...

S-EPMC5482907 | biostudies-literature

Pptc7 is an essential phosphatase for promoting mammalian mitochondrial metabolism and biogenesis

Mitochondrial proteins are replete with phosphorylation; however, the origin, abundance, and functional relevance of these modifications are largely unclear. Nonetheless, mitochondria possess multiple resident phosphatases, suggesting that protein dephosphorylation may be broadly important for mitoc...

ORGANISM(S): Mus musculus (Mouse)

2019-05-29 | PXD012743 | Pride

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