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ProteomicsRevealing novel protein interaction partners of glyphosate in Escherichia coli
Despite all debates about its safe use, glyphosate still is the most widely applied active ingredient in herbicide products with renewed approval in the European Union until 2033. Non-target organisms are commonly exposed to glyphosate as a matter of its mode of application, with its broader environ...
ORGANISM(S): Escherichia coli 
2025-01-02 | PXD055134 | Pride
Thermal proteome profiling Escherichia coli Acute and chronic exposure Glyphosate Protein interaction partner 
ProteomicsDSS Microbiota LC-MS/MS
In the DSS-induced colitis model, the epithelial damage and resulting inflammation is restricted to the colon, with a potential influence on the microbial composition in the adjacent cecum. Several studies have reported changes of the gut microbiota in the DSS-induced colitis model and other mouse m...
ORGANISM(S): Mus musculus (Mouse) 
2020-03-17 | PXD007220 | Pride
Dextran sulfate sodium (dss)  colitis  mouse model  metaproteomics  microbiota 
ProteomicsFecal Transplant from Roux-Y-Gastric-Bypass rat model into a diet induced obesity rat model
Investigating alterations the intestinal microbiome in a diet induced obesity (DIO) rat model after fecal transplant from rats, which underwent Roux-Y-Gastric-Bypass surgery (RYGB). The microbiomes of the RYGB-donor rats, the DIO rats, and DIO rats after receiving the fecal transplant from the RYGB ...
ORGANISM(S): Rattus norvegicus (Rat) 
2022-08-12 | PXD026606 | Pride
Roux-y-gastric bypass surgery Metaproteomics Microbiome Obesity Rat Anti-biotics 
ProteomicsHuman HDL 2D-LC-MS/MS - Proteome profiles of HDL particles of patients with chronic heart failure are associated with immune response and also include bacteria proteins
Besides modulation of reverse cholesterol transport, high density lipoprotein (HDL) is able to modulate vascular function by stimulating endothelial nitric oxide synthase. Recently, it could be documented that this function of HDL was significantly impaired in patients with chronic heart failure (CH...
ORGANISM(S): Homo sapiens (Human) 
2016-01-04 | PXD002977 | Pride
Hdl variability  hdl functionality lc-ms/ms Human hdl 
ProteomicsHuman HDL 2D-LC-MS/MS
Besides modulation of reverse cholesterol transport, high density lipoprotein (HDL) is able to modulate vascular function by stimulating endothelial nitric oxide synthase. Recently, it could be documented that this function of HDL was significantly impaired in patients with chronic heart failure (CH...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-04-01 | MSV000080857 | MassIVE
MetabolomicsMicrobial community functioning during plant litter decomposition

Microbial life in soil is fueled by dissolved organic matter (DOM) that leaches from the litter layer. It is well known that decomposer communities adapt to the available litter source, but it remains unclear if they functionally compete or synergistically address different litter types. Therefor...

2024-02-14 | MTBLS1885 | MetaboLights
ProteomicsCritical Assessment of Metaproteome Investigation (CAMPI): a Multi-Lab Comparison of Established Workflows
Metaproteomics, the study of the collective proteome within a microbial ecosystem, has substantially grown over the past few years. This growth comes from the increased awareness that it can powerfully supplement metagenomics and metatranscriptomics analyses. Although metaproteomics is more challeng...
ORGANISM(S): Escherichia Coli (ncbitaxon:562) Homo Sapiens (ncbitaxon:9606) 
2022-06-08 | MSV000089620 | MassIVE
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