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ProteomicsDefeating major contaminants in Fe3+-IMAC phosphopeptide enrichment
Optimized sample preparation workflow for Fe-IMAC phosphopeptide enrichment.
ORGANISM(S): Homo sapiens (Human) Escherichia coli 
2018-02-19 | PXD008289 | Pride
Human E.coli 
ProteomicsSynthetic (Phospho)Peptide Library
The submitted dataset contains raw files from 96 synthetic peptide libraries, using either HCD or ETD as fragmentation technique. The synthesized 96 tryptic peptide libraries containing >100,000 unmodified peptides plus their corresponding >100,000 phosphorylated counterparts with precisely known s...
ORGANISM(S): Homo sapiens (Human) 
2013-05-05 | PXD000138 | Pride
Synthetic library Hcd Etd 
ProteomicsPhosphoproteomics of PDT treated SK-ChA-1 cells
(Phospho)proteomic study of the cell survival pathways induced by ZnPC-encapsulating PEGylated cationic liposomes (ZPCLs) in SK-ChA-1 cells.
ORGANISM(S): Homo sapiens (Human) 
2018-10-27 | PXD004320 | Pride
Pdt 
ProteomicsExtensive arginine phosphorylation in Staphylococcus aureus is influences by Stp1
Ever since the identification of the first protein-arginine kinase, McsB, in B. subtilis arginine phosphorylation gained more attention. However, the analysis of phosphorylations especially phosphormaidates comes along with several challenges. The sub-stoichiometric nature of protein phosphorylation...
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 Escherichia coli Staphylococcus aureus 
2022-06-09 | PXD026981 | Pride
Fragmentation Staphylococcus aureus Stp1 Phosphorylation Arginine phosphorylation 
ProteomicsIn depth characterization of the S. aureus phosphoproteome reveals new targets of Stk1
Staphylococcus aureus is the leading cause of infections worldwide and infection results in a variety of diseases. As of no surprise, phosphorylation is a major game player in signaling cascades and has been shown to be involved in S. aureus virulence. Albeit long neglected, eukaryotic-like serine/t...
ORGANISM(S): Bacillus subtilis subsp. subtilis str. 168 Staphylococcus aureus (strain USA300) 
2020-12-21 | PXD020226 | Pride
Phosphoproteome Staphylococcus aureus Bacteria Stk1 
ProteomicsWidespread protein histidine phosphorylation in bacteria
For decades, extreme difficulties in analyzing histidine phosphorylation have limited the study of phosphohistidine signaling. Here we report a method revealing widespread and abundant protein histidine phosphorylation in E. coli. Our new approach generated the largest E. coli phosphoproteome datase...
ORGANISM(S): Escherichia Coli 
2017-12-07 | PXD008369 | JPOST Repository
ProteomicsEvaluation of of kinase acitivity profiling using chemical proteomics
Evaluation of kinase binding to immobilized inhibitors upon kinase activation. Comparison of cheomproteomic binding changes to phosphoproteomic activation profiles.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-10-21 | MSV000080272 | MassIVE
OtherComprehensive and reproducible phosphopeptide enrichment using iron immobilized metal ion affinity chromatography (Fe-IMAC) columns.
Data from ProteomeXchange, PXD ID: PXD001060. File: 00730_A11_P005652_S00_T01_R1.mzml. Published as part of Mol Cell Proteomics. 2015 Jan;14(1):205-15 . From the Abstract: {{i}} ... Current offline enrichment approaches using TiO(2), Ti, and Fe immobilized metal ion affinity chromatography (IMAC) m...
ORGANISM(S): Homo_sapiens_viruses, Human 
GPM32310023168 | GPMDB
Resource Reanalysis 
ProteomicsSynthetic (Phospho)Peptide Library
The submitted dataset contains raw files from 96 synthetic peptide libraries, using either HCD or ETD as fragmentation technique. The synthesized 96 tryptic peptide libraries containing >100,000 unmodified peptides plus their corresponding >100,000 phosphorylated counterparts with precisely known s...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-04-14 | MSV000091718 | MassIVE
ProteomicsMass spectrometry based draft of the human proteome
This PXD project contains two projects published on ProteomicsDB (https://www.proteomicsDB.org) as integral part of the publication. The first project entitled 'human body map' (https://www.proteomicsdb.org/#projects/42) involves the analysis of 36 different human tissues and body fluids. The second...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2016-02-23 | MSV000079526 | MassIVE
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