Li Hu H - OmicsDI

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Unknown (16461)
Proteomics (344)
Transcriptomics (194)
Metabolomics (63)
Genomics (21)
Models (2)
Genomic (1)
Multiomics (1)

Organisms

Homo sapiens (162)
Mus musculus (91)
Arabidopsis thaliana (8)
Rattus norvegicus (7)
Gallus gallus (6)
Saccharomyces cerevisiae (6)
Drosophila melanogaster (5)
Macaca mulatta (4)
Camponotus floridanus (3)
Harpegnathos saltator (3)
Urocitellus parryii (3)
Oryza sativa (3)
Oryza sativa Indica Group (2)
Bos taurus (2)
Glycine max (2)
Rattus (1)
Pseudomonas phage PaP1 (1)
Acromyrmex echinatior (1)
Nannochloropsis oceanica (1)
Brassica oleracea (1)
Musa acuminata (1)
Oryza longistaminata (1)
Brucella melitensis (1)
Rana temporaria (1)
Clonorchis sinensis (1)
Columba livia (1)
Listeria monocytogenes (1)
Populus tremula x Populus alba (1)
Setaria italica (1)
Pseudomonas putida KT2440 (1)

Organisms

Mus musculus (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (208)
pride (190)
iProX (134)
MetaboLights (62)
MassIVE (12)
EGA (4)
PeptideAtlas (4)
BioModels (2)
jPOST (2)
ENA (2)
dbGaP (1)
geo (1)
GNPS (1)
PanoramaPublic (1)
PAXDB (1)

Tissue

Cell culture (53)
Liver (10)
Brain (9)
Blood serum (8)
Epithelial cell (6)
Leaf (6)
Blood (5)
Heart (5)
Hepatocyte (5)
Kidney (5)
Testis (5)
Plant cell (4)
Whole body (4)
Liver (3)
Blood plasma (3)
Bone marrow (3)
Embryonic stem cell (3)
HeLa cell (3)
Pancreas (3)
Permanent cell line cell (3)
Root (3)
Skin (3)
Spleen (3)
Stem cell (3)
Adrenal adenoma cell (2)
Breast (2)
Byssus (2)
Colon (2)
Early embryonic cell (2)
Others (1)

Disease

Disease free (5)
Breast cancer (3)
Colon cancer (3)
Pancreatic cancer (3)
Acute leukemia (2)
Hepatocellular carcinoma (2)
Non-small cell lung carcinoma (2)
Stomach cancer (2)
Schizophrenia (1)
Porphyria NOS (1)
Neurofibromatosis type 1 (1)
Adult hepatocellular carcinoma (1)
Alzheimer's disease (1)
Bacterial infectious disease (1)
Brain cancer (1)
Brain glioblastoma multiforme (1)
Cardiovascular system disease (1)
Endometrial Endometrioid Adenocarcinoma (1)
Hyperhomocysteinemia (1)
IgA glomerulonephritis (1)
Liver disease (1)
Lung carcinoma (1)
Neuroblastoma (1)
Osteoarthritis (1)
Pancreatic carcinoma (1)
Pancreatitis (1)
Primary autosomal recessive microcephaly (1)
Proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome (1)
Seckel syndrome (1)
Stomach carcinoma (1)

Technology Type

Mass Spectrometry (190)
Shotgun proteomics (114)
Mass spectrometry (52)
Bottom-up proteomics (26)
Data-dependent acquisition (18)
Gel-based experiment (12)
Affinity purification coupled with mass spectrometry proteomics (11)
SWATH MS (8)
Top-down proteomics (7)
Mass spectrometry assay (6)
Data-independent acquisition (6)
NMR spectroscopy (4)
Proteogenomics (4)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Metaproteomics (2)
Illumina HiSeq 2000 (1)
Affinity proteomics (1)
Glycoproteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (26)
Liquid Chromatography MS - positive - reverse phase (25)
Liquid Chromatography MS - positive - hilic (9)
Liquid Chromatography MS - negative - hilic (8)
Illumina HiSeq 2000 (5)
Orbitrap Fusion Lumos (4)
Illumina HiSeq 2500 (3)
NextSeq 500 (3)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (3)
Bruker (3)
Liquid Chromatography MS - (3)
Q Exactive (2)
LTQ Orbitrap Elite (2)
Q Exactive Plus (2)
Gas Chromatography MS - (2)
Liquid Chromatography MS - - reverse phase (2)
6540 Q-TOF LC/MS (Agilent) (2)
Exactive (Thermo Scientific) (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
HiSeq 2500 Illumina (1)
Ion Torrent PGM (1)
MinION (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
MicrOTOF-Q II (1)
Exactive Plus (1)
LTQ (1)
Orbitrap Fusion (1)
Q Exactive HF (1)

Publication Date

2023 (60)
2025 (58)
2021 (50)
2022 (44)
2014 (39)
2013 (37)
2024 (30)
2020 (28)
2019 (26)
2018 (24)
2012 (24)
2010 (23)
2015 (22)
2016 (19)
2026 (19)
2011 (18)
2017 (13)
2009 (7)
2008 (7)
2005 (5)
2007 (2)

UNIPROT ID/AC

3BHS1_MACMU (1)
9544.ENSMMUP00000000029 (1)
9544.ENSMMUP00000000072 (1)
9544.ENSMMUP00000000075 (1)
9544.ENSMMUP00000000192 (1)
9544.ENSMMUP00000000231 (1)
9544.ENSMMUP00000000270 (1)
9544.ENSMMUP00000000273 (1)
9544.ENSMMUP00000000300 (1)
9544.ENSMMUP00000000331 (1)
9544.ENSMMUP00000000335 (1)
9544.ENSMMUP00000000399 (1)
9544.ENSMMUP00000000400 (1)
9544.ENSMMUP00000000529 (1)
9544.ENSMMUP00000000584 (1)
9544.ENSMMUP00000000645 (1)
9544.ENSMMUP00000000701 (1)
9544.ENSMMUP00000000740 (1)
9544.ENSMMUP00000000788 (1)
9544.ENSMMUP00000000800 (1)
9544.ENSMMUP00000000801 (1)
9544.ENSMMUP00000000832 (1)
9544.ENSMMUP00000000870 (1)
9544.ENSMMUP00000000898 (1)
9544.ENSMMUP00000000905 (1)
9544.ENSMMUP00000000981 (1)
9544.ENSMMUP00000001028 (1)
9544.ENSMMUP00000001049 (1)
9544.ENSMMUP00000001078 (1)
9544.ENSMMUP00000001171 (1)

ENSEMBL ID

ENSG00000170477 (1)

CHEBI ID

CHEBI:16704 (21)
CHEBI:15741 (18)
CHEBI:17750 (18)
CHEBI:17368 (17)
CHEBI:30769 (17)
CHEBI:16750 (16)
CHEBI:18012 (16)
CHEBI:15354 (16)
CHEBI:16040 (15)
CHEBI:6650 (15)
CHEBI:16335 (15)
CHEBI:16467 (15)
CHEBI:15891 (15)
CHEBI:30915 (15)
CHEBI:16919 (15)
CHEBI:17596 (15)
CHEBI:16708 (14)
CHEBI:17154 (14)
CHEBI:17568 (14)
CHEBI:17203 (14)
CHEBI:15971 (14)
CHEBI:17053 (14)
CHEBI:16737 (14)
CHEBI:15428 (13)
CHEBI:17821 (13)
CHEBI:16865 (13)
CHEBI:16393 (13)
CHEBI:17509 (13)
CHEBI:7916 (13)
CHEBI:16027 (13)

Metabolite Name

Uridine (15)
Betaine (13)
Adenosine (12)
Hypoxanthine (12)
Adenine (11)
Guanosine (11)
Creatinine (11)
L-Histidine (10)
Choline (10)
Cytosine (10)
Creatine (10)
Uracil (9)
L-Proline (9)
L-Arginine (9)
Taurine (9)
Cytidine (9)
Hippuric acid (9)
Citric acid (8)
Stearic acid (8)
Riboflavin (8)
Xanthine (8)
L-Valine (8)
L-Tyrosine (8)
Inosine (8)
L-Alanine (7)
Trigonelline (7)
Deoxycholic acid (7)
Serine (7)
Linoleic acid (7)
L-Tryptophan (7)

First Public Date

2018 (1)
2015 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (13)
Central South University (3)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, China. (3)
University at buffalo, SUNY (3)
Yazhouwan National Laboratory, Sanya 572024, China (3)
Abbvie Bioresearch Center (2)
Children's Hospital of Nanjing Medical University (2)
Department of Clinical Laboratory, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, China. The Key Laboratory of Molecular Biology of Infectious Diseases designated by the Chinese Ministry of Education, Chongqing Medical University, Chongqing, China. (2)
Guangdong Pharmaceutical University (2)
Institute of Apicultural Research (2)
Institute of Apicultural Research, Chinese Academy of Agricultural Sciences (2)
Moffitt Cancer Center Tampa, FL, USA (2)
Nanjing Med Univ, State Key Lab Reprod Med, Dept Histol & Embryol, 140 Hanzhong Rd, Nanjing 210029, Jiangsu, Peoples R China. (2)
Nanjing Medical University (2)
Ocean University of China (2)
School of Pharmacy, University of Wisconsin-Madison (UW-Madison) (2)
Shanghai Institute of Materia Medica (2)
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan, Hubei,China (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
Yale Cancer Biology Institute (2)
Zhejiang Provincial Key Laboratory of Medical Genetics, Key Laboratory of Laboratory Medicine, Ministry of Education, China, School of Laboratory Medicine and Life Sciences, Wenzhou Medical University (2)
the First Affiliated Hospital of Chongqing Medical University (2)
1 Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. 2 Center of Clinical Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, China. 3 State Key Laboratory Jiangsu Center for the Collaboration and Innovation of Cancer Biotherapy, Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. (1)
1 Department of Cardiology, Zhongshan Hospital, Fudan University, Shanghai Institute of Cardiovascular Diseases, China. 2 Department of Cardiovascular Medicine, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. (1)
1. School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region, China. 2. Centre for Translational Stem Cell Biology, The University of Hong Kong, Hong Kong Special Administrative Region, China. (1)
1F, Bldg A, No.18 Science Park Road, Life Science Park, Changping District, Beijing 102206, P. R. China (1)
Army medical university (1)
Beijing Institute of Pharmacology and Toxicology (1)
Bio-X Institutes, Key Laboratory for the Genetics of Development and Neuropsychiatric Disorders (Ministry of Education), Shanghai Key Laboratory of Psychotic Disorders, and Brain Science and Technology Research Center, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China. (1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (1)

IsPrivate

False (2)

Model Flag

Non Miriam (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (117)
RNA-seq of coding RNA (45)
RNA-seq of non coding RNA (15)
Methylation profiling by high throughput sequencing (10)
Comparative genomic hybridization by array (5)
ChIP-seq (4)
Unknown experiment type (2)
Cell line - High-throughput sequencing (2)
RNA-seq of coding RNA from single cells (2)
High-throughput sequencing (1)
ATAC-seq (1)
Other (1)
MicroRNA profiling by array (1)
DNA-seq (1)
RNA-seq of total RNA (1)

Release Date

2025 (2720)
2022 (2303)
2023 (2098)
2024 (2062)
2021 (1694)
2020 (1291)
2019 (906)
2018 (729)
2017 (631)
2016 (504)
2015 (401)
2026 (349)
2014 (285)
2013 (203)
2012 (154)
2011 (108)
2010 (82)
2009 (60)
2008 (50)
2007 (8)
2005 (8)
2004 (7)
2006 (6)
2002 (4)
2003 (3)
2001 (2)

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The complete chloroplast genome of Bupleurum marginatum var. stenophyllum (H. Wolff) Shan & Yin Li (Apiaceae), a new substitution for Chinese medicinal material, Bupleuri Radix (Chai hu).

Not available

S-EPMC7872558 | biostudies-literature

Bi-Functional Diaminopropane Additive Enables Stable Li Anodes and Highly Efficient Cathodes for High-Performance Li-Air Batteries.

Not available

S-EPMC12407377 | biostudies-literature

Modeling and predicting hemorrhagic fever with renal syndrome trends based on meteorological factors in Hu County, China.

Not available

S-EPMC4395290 | biostudies-literature

Transcriptomic profiling of L-rhamnose utilization in Lmo0753 deletion mutant of Listeria monocytogenes EGDe from human foodborne outbreak associated lineage LII

Among the three major genetic lineages of L. monocytogenes (i.e. LI, LII, and LIII), LI and LII are predominantly associated with foodborne listeriosis outbreaks, whereas LIII is rarely implicated in human infections. In a previous study, we identified a Crp/Fnr family transcription factor lmo0753 t...

ORGANISM(S): Listeria monocytogenes

2013-07-17 | E-GEOD-47721 | biostudies-arrayexpress

iTRAQ-based proteomic study investigate the effects of pre-partum dietary crude protein level on colostrum fat globule membrane proteins

Purpose: This study aimed to investigate the variation of MFGM proteins in colostrum of Hu sheep under different dietary crude protein levels. Experimental design: Collecting the colostrum from Hu sheep fed three different levels of dietary crude protein levels. Plasma membrane proteins were enriche...

ORGANISM(S): Ovis Aries

2022-10-17 | PXD037465 |

HeLa cells were transfected with MARVELD1, then treated with or without HU treatment,following with IP and LC-MSMS analysis

To analyze MARVELD1 interacting proteins, HeLa cells were transfected with MARVELD1-Flag or pcDNA3.1 (PC), then treated with 8 mM Hydroxyurea (MCE, USA) or DMSO for 24 h, and subjected to IP assays with anti-DYKDDDDK magnetic agarose (Thermo, USA). After washing five times with PBS buffer, samples w...

ORGANISM(S): Homo sapiens (Human)

2023-05-10 | PXD034445 | Pride

Hela cells lc-msms marveld1 hu