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Transcriptomicsgenome-wide measurement of mRNA lifetime in Escherichia coli
We measured the mRNA abundance in E.coli using RNAseq to calculate mRNA lifetimes. The data is used in support of a larger paper on the proteome and transcriptome of E.coli. Comparison of mRNA abundance over time, after the addition of transcription inhibitor, rifampicin. Center: Harvard University
ORGANISM(S): Escherichia coli 
2010-07-30 | E-GEOD-21341 | biostudies-arrayexpress
ProteomicsA qualitative proteome-wide lysine crotonylation profiling reveals protein modification alteration in the leukocyte extravasation pathway in systemic lupus erythematosus
Background Systemic lupus erythematosus (SLE) is a severe systemic autoimmune disease with multiple manifestations. Lysine crotonylation (Kcr) is a newly discovered post-translational modification (PTM) epigenetic pattern which may affect gene expression and linked to diseases causally. Methods We ...
ORGANISM(S): Homo sapiens (Human) 
2024-01-26 | PXD042217 | Pride
Systemic lupus erythematosus  proteome  crotonylation  post-translational modifications  leukocyte extravasation 
ProteomicsMass spectrometry analysis for IP with SNX10 Antibody in CRC HCT-8 cell
SNX10-HA overexpression was performed in CRC HCT-8 cells. Cells were then infected with HCoV-OC43 or control virus fluid. The protein interacted with SNX10 were analyzed by mass spectrometry. The SNX10 overexpressed and control cells in the logarithmic growth phase were collected for IP with HA-Tag...
ORGANISM(S): Homo Sapiens 
2025-03-17 | PXD061906 |
ProteomicsE.coli - Whole organism, Yfp fusion library, YFP normalized data (Taniguchi,science,2010)
abundance based on YFP normalized data, YFP fusion library, Interaction consistency score: 6.5, Coverage: 24
ORGANISM(S): 511145 
2010-00-00 | 3472819899 | PAXDB
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